Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p52780 Brassica napus HOM05D000016 ORTHO05D103824 2.1e-64 248.8 120 100.0
C05p52760 Brassica napus HOM05D000016 ORTHO05D000433 3.6e-16 88.6 47 87.2
BolC5t33954H Brassica oleracea HOM05D000016 ORTHO05D000433 8.0e-16 87.4 47 85.1
BraA05t22301Z Brassica rapa HOM05D000016 ORTHO05D000433 1.4e-15 86.7 49 81.6
BolC5t33955H Brassica oleracea HOM05D000016 ORTHO05D000433 5.2e-15 84.7 49 79.6
C05p52770 Brassica napus HOM05D000016 ORTHO05D000433 4.8e-13 78.2 49 77.6
BcaC05g29064 Brassica carinata HOM05D000016 ORTHO05D000433 8.6e-10 67.4 40 75.0
AL3G33760 Arabidopsis lyrata HOM05D000016 ORTHO05D000433 2.3e-07 59.3 48 54.2
C05p44420 Brassica napus HOM05D000016 ORTHO05D000433 2.3e-07 59.3 48 60.4
BolC5t33165H Brassica oleracea HOM05D000016 ORTHO05D000433 2.3e-07 59.3 48 60.4
BcaB06g26077 Brassica carinata HOM05D000016 ORTHO05D000433 4.0e-07 58.5 48 60.4
AL3G33780 Arabidopsis lyrata HOM05D000016 ORTHO05D000433 5.2e-07 58.2 47 57.4
A05p29020 Brassica napus HOM05D000016 ORTHO05D000433 5.2e-07 58.2 48 58.3
BraA05t21784Z Brassica rapa HOM05D000016 ORTHO05D000433 5.2e-07 58.2 48 58.3
BcaB04g19082 Brassica carinata HOM05D000016 ORTHO05D000433 6.8e-07 57.8 46 58.7
AT3G20130 Arabidopsis thaliana HOM05D000016 ORTHO05D000433 1.2e-06 57.0 47 55.3
BcaB04g19078 Brassica carinata HOM05D000016 ORTHO05D000433 1.2e-06 57.0 46 58.7
BcaC01g03584 Brassica carinata HOM05D000016 ORTHO05D000433 1.2e-06 57.0 46 58.7
C03p50920 Brassica napus HOM05D000016 ORTHO05D000433 1.2e-06 57.0 46 58.7
C03p50910 Brassica napus HOM05D000016 ORTHO05D000433 1.5e-06 56.6 46 56.5
CARHR095650 Cardamine hirsuta HOM05D000016 ORTHO05D000433 1.5e-06 56.6 46 54.3
AT2G14100 Arabidopsis thaliana HOM05D000016 ORTHO05D000433 2.0e-06 56.2 47 53.2
AT4G15330 Arabidopsis thaliana HOM05D000016 ORTHO05D000433 2.0e-06 56.2 49 51.0
AT4G15380 Arabidopsis thaliana HOM05D000016 ORTHO05D000433 2.0e-06 56.2 46 54.3
A03p30630 Brassica napus HOM05D000016 ORTHO05D000433 2.0e-06 56.2 49 51.0
BolC3t17378H Brassica oleracea HOM05D000016 ORTHO05D000433 2.0e-06 56.2 56 51.8
BraA03t12242Z Brassica rapa HOM05D000016 ORTHO05D000433 2.0e-06 56.2 49 51.0
Carub.0003s2000 Capsella rubella HOM05D000016 ORTHO05D000433 2.0e-06 56.2 47 53.2
BcaC01g06707 Brassica carinata HOM05D000016 ORTHO05D000433 2.6e-06 55.8 48 52.1
A03p41580 Brassica napus HOM05D000016 ORTHO05D000433 2.6e-06 55.8 46 56.5
A04p14870 Brassica napus HOM05D000016 ORTHO05D000433 2.6e-06 55.8 46 58.7
C03p37240 Brassica napus HOM05D000016 ORTHO05D000433 2.6e-06 55.8 48 52.1
C04p48890 Brassica napus HOM05D000016 ORTHO05D000433 2.6e-06 55.8 46 58.7
BolC3t17373H Brassica oleracea HOM05D000016 ORTHO05D000433 2.6e-06 55.8 46 56.5
BolC4t26472H Brassica oleracea HOM05D000016 ORTHO05D000433 2.6e-06 55.8 46 58.7
BraA04t17125Z Brassica rapa HOM05D000016 ORTHO05D000433 2.6e-06 55.8 46 58.7
CARHR095610 Cardamine hirsuta HOM05D000016 ORTHO05D000433 2.6e-06 55.8 48 54.2
AT3G20100 Arabidopsis thaliana HOM05D000016 ORTHO05D000433 3.4e-06 55.5 46 58.7
BcaB01g02508 Brassica carinata HOM05D000016 ORTHO05D000433 3.4e-06 55.5 48 52.1
Aa31LG8G6910 Aethionema arabicum HOM05D000016 ORTHO05D000433 9.8e-06 53.9 47 53.2
AL3G33790 Arabidopsis lyrata HOM05D000016 ORTHO05D000433 9.8e-06 53.9 46 54.3
BcaB06g26080 Brassica carinata HOM05D000016 ORTHO05D000433 9.8e-06 53.9 47 51.1
A05p28860 Brassica napus HOM05D000016 ORTHO05D000433 9.8e-06 53.9 47 51.1
A05p28880 Brassica napus HOM05D000016 ORTHO05D000433 9.8e-06 53.9 47 51.1
BraA05t21763Z Brassica rapa HOM05D000016 ORTHO05D000433 9.8e-06 53.9 47 51.1
BraA05t21773Z Brassica rapa HOM05D000016 ORTHO05D000433 9.8e-06 53.9 47 51.1
BraA05t21779Z Brassica rapa HOM05D000016 ORTHO05D000433 9.8e-06 53.9 47 51.1


User provided reference genes

Program Settings