Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29061 Brassica carinata HOM05D010899 ORTHO05D012947 6.3e-82 307.4 155 100.0
C05p52720 Brassica napus HOM05D010899 ORTHO05D012947 6.3e-82 307.4 155 100.0
BolC5t33951H Brassica oleracea HOM05D010899 ORTHO05D012947 2.4e-81 305.4 155 99.4
A05p34870 Brassica napus HOM05D010899 ORTHO05D012947 2.7e-80 302.0 155 98.1
BraA05t22299Z Brassica rapa HOM05D010899 ORTHO05D012947 2.7e-80 302.0 155 98.1
BcaB06g25375 Brassica carinata HOM05D010899 ORTHO05D012947 4.0e-76 288.1 155 92.9
Sp3g12830 Schrenkiella parvula HOM05D010899 ORTHO05D012947 3.2e-65 251.9 155 81.9
Thhalv10021702m.g Eutrema salsugineum HOM05D010899 ORTHO05D012947 3.3e-62 241.9 157 82.2
BcaC09g48427 Brassica carinata HOM05D010899 ORTHO05D012947 4.7e-61 238.0 156 78.8
C01p49870 Brassica napus HOM05D010899 ORTHO05D012947 4.7e-61 238.0 156 78.8
BolC1t04944H Brassica oleracea HOM05D010899 ORTHO05D012947 4.7e-61 238.0 156 78.8
AL3G26890 Arabidopsis lyrata HOM05D010899 ORTHO05D012947 3.1e-60 235.3 158 80.4
AT3G14560 Arabidopsis thaliana HOM05D010899 ORTHO05D012947 2.9e-58 228.8 158 77.8
A01p39170 Brassica napus HOM05D010899 ORTHO05D012947 1.2e-56 223.4 148 78.4
BraA01t03962Z Brassica rapa HOM05D010899 ORTHO05D012947 1.2e-56 223.4 148 78.4
CARHR089520 Cardamine hirsuta HOM05D010899 ORTHO05D012947 3.5e-56 221.9 158 77.2
Carub.0003s1425 Capsella rubella HOM05D010899 ORTHO05D012947 2.4e-52 209.1 163 75.5
Aa31LG8G1780 Aethionema arabicum HOM05D010899 ORTHO05D012947 6.0e-24 114.8 158 48.7
THA.LOC104822599 Tarenaya hassleriana HOM05D010899 ORTHO05D012947 5.1e-15 85.1 166 42.8
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 1.1e-06 57.4 166 31.9
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 4.3e-06 55.5 164 31.7
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 5.7e-06 55.1 145 31.0


User provided reference genes

Program Settings