Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-142 510.0 303 100.0
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 8.2e-134 480.7 351 85.5
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 3.8e-115 418.7 302 85.1
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 2.2e-110 402.9 302 76.8
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-109 399.8 302 76.2
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-106 389.0 302 80.5
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-104 383.6 302 74.8
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 2.3e-104 382.9 323 75.5
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 6.5e-99 364.8 342 70.5
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 8.6e-99 364.4 296 75.0
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 8.6e-99 364.4 296 75.0
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 6.1e-97 358.2 248 77.8
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-94 350.5 249 81.5
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-94 350.5 302 67.5
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 8.3e-94 347.8 250 77.6
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 9.5e-90 334.3 289 66.1
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 8.0e-89 331.3 302 69.5
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 5.0e-83 312.0 256 71.5
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 5.0e-83 312.0 256 73.4
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-81 307.0 256 69.9
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-80 304.3 221 81.0
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 9.8e-79 297.7 294 62.2
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-77 293.5 208 78.8
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 5.4e-77 292.0 255 67.1
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 9.2e-77 291.2 302 60.3
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 6.0e-76 288.5 208 81.7
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-75 287.7 267 67.4
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-75 287.0 250 72.0
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-75 286.6 261 61.7
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 6.6e-75 285.0 250 71.6
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 3.3e-74 282.7 256 71.5
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-73 280.8 206 75.2
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 2.1e-73 280.0 256 71.1
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-72 277.3 234 70.5
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-72 276.6 245 70.2
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-71 273.9 254 65.0
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-71 272.7 230 67.8
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 4.9e-70 268.9 187 79.1
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 8.3e-70 268.1 223 70.4
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 1.2e-68 264.2 249 67.5
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 3.3e-66 256.1 217 73.3
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 2.8e-65 253.1 226 70.8
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 6.2e-65 251.9 249 65.9
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-58 230.3 256 63.3
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 2.5e-58 229.9 250 62.4
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 1.2e-57 227.6 250 62.8
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-57 227.3 152 77.6
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 1.6e-57 227.3 304 51.0
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 6.2e-57 225.3 182 69.8
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-56 223.8 256 61.3
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-56 223.4 228 59.6
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 9.0e-56 221.5 290 50.7
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-55 220.7 129 87.6
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 3.4e-55 219.5 196 71.4
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 7.6e-55 218.4 175 71.4
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 6.4e-54 215.3 178 74.7
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 8.4e-54 214.9 175 70.9
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 8.4e-54 214.9 319 50.2
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 7.1e-53 211.8 220 64.1
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-52 211.1 134 81.3
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 5.1e-51 205.7 173 68.8
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 3.3e-50 203.0 214 57.5
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 1.3e-49 201.1 179 70.9
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 1.3e-49 201.1 250 58.8
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 2.8e-49 199.9 169 75.1
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 2.4e-48 196.8 215 58.6
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 2.4e-48 196.8 215 58.6
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 3.1e-48 196.4 179 70.4
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-45 187.2 143 72.0
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 5.4e-45 185.7 143 70.6
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-44 183.3 143 76.9
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 7.9e-44 181.8 276 47.8
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 3.9e-43 179.5 283 45.6
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 4.3e-42 176.0 254 54.7
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 1.3e-41 174.5 225 50.7
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 1.3e-41 174.5 234 51.3
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 2.8e-41 173.3 141 67.4
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 3.7e-41 172.9 312 43.3
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 3.7e-41 172.9 218 53.7
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-40 171.0 143 76.2
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 1.4e-40 171.0 296 43.6
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 3.1e-40 169.9 181 59.7
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 9.0e-40 168.3 264 52.7
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 9.9e-39 164.9 282 44.7
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 3.8e-38 162.9 142 73.9
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 4.9e-38 162.5 128 70.3
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-37 161.4 174 66.1
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-36 157.9 120 73.3
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-36 157.9 130 70.8
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 2.1e-36 157.1 219 48.4
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 4.6e-36 156.0 203 48.8
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 1.8e-35 154.1 155 57.4
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 8.7e-35 151.8 174 56.9
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 1.1e-34 151.4 254 48.0
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 2.5e-34 150.2 115 71.3
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 9.6e-34 148.3 150 57.3
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 1.6e-33 147.5 251 45.8
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 8.2e-33 145.2 251 46.2
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 1.1e-32 144.8 115 68.7
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 4.0e-32 142.9 133 72.9
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 1.2e-31 141.4 153 55.6
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-31 140.6 186 57.0
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 7.6e-31 138.7 98 75.5
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 7.6e-31 138.7 125 70.4
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 3.2e-29 133.3 134 58.2
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 1.2e-28 131.3 138 58.0
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 1.6e-28 131.0 144 59.7
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 3.9e-27 126.3 201 43.8
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 6.7e-27 125.6 104 69.2
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 1.5e-26 124.4 225 43.6
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 4.3e-26 122.9 118 65.3
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.6e-25 120.9 223 44.4
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 8.2e-25 118.6 225 42.7
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 1.4e-24 117.9 116 61.2
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 5.3e-24 115.9 192 42.7
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 2.0e-23 114.0 261 36.0
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 1.3e-22 111.3 220 39.5
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 2.9e-22 110.2 78 73.1
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 2.9e-22 110.2 102 62.7
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 3.8e-22 109.8 152 48.0
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 5.0e-22 109.4 160 45.6
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 3.2e-21 106.7 60 88.3
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 9.4e-21 105.1 251 39.0
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-20 104.8 335 37.3
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 2.7e-20 103.6 152 48.7
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-18 96.7 74 68.9
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 5.3e-16 89.4 205 37.6
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 5.3e-16 89.4 102 54.9
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 2.6e-15 87.0 204 37.3
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 7.7e-15 85.5 78 64.1
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 7.7e-15 85.5 143 46.2
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 2.2e-14 84.0 124 50.0
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 2.9e-14 83.6 66 69.7
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 5.0e-14 82.8 124 49.2
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 1.4e-13 81.3 123 48.8
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 1.9e-13 80.9 78 59.0
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 1.6e-12 77.8 158 39.9
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 2.1e-12 77.4 240 31.2
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 2.1e-12 77.4 66 65.2
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 3.6e-12 76.6 53 77.4
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 1.0e-11 75.1 117 47.9
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 3.0e-11 73.6 55 70.9
BolC6t37761H Brassica oleracea HOM05D004489 ORTHO05D104721 5.1e-11 72.8 151 38.4
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 3.7e-09 66.6 74 54.1
A05p23080 Brassica napus HOM05D010967 ORTHO05D017683 4.8e-09 66.2 92 48.9
A01p19980 Brassica napus HOM05D010967 ORTHO05D017683 1.4e-08 64.7 92 47.8
BraA01t02827Z Brassica rapa HOM05D010967 ORTHO05D017683 1.4e-08 64.7 92 47.8
A09p35600 Brassica napus HOM05D010967 ORTHO05D017683 1.8e-08 64.3 92 47.8
A01p34440 Brassica napus HOM05D010967 ORTHO05D017683 3.1e-08 63.5 92 47.8
A05p17100 Brassica napus HOM05D010967 ORTHO05D017683 3.1e-08 63.5 92 47.8
A09p48280 Brassica napus HOM05D010967 ORTHO05D017683 3.1e-08 63.5 92 47.8
C04p13490 Brassica napus HOM05D008277 ORTHO05D100146 4.1e-08 63.2 245 29.8
BraA05t21163Z Brassica rapa HOM05D010967 ORTHO05D108496 4.1e-08 63.2 71 56.3
A06p28060 Brassica napus HOM05D010967 ORTHO05D017683 1.5e-07 61.2 88 44.3
BraA05t21091Z Brassica rapa HOM05D004489 ORTHO05D033093 1.5e-07 61.2 56 66.1
A05p23320 Brassica napus HOM05D008277 ORTHO05D000199 3.4e-07 60.1 245 29.4
BraA02t08312Z Brassica rapa HOM05D010967 ORTHO05D108770 7.7e-07 58.9 70 54.3
BraA05t21197Z Brassica rapa HOM05D008277 ORTHO05D016104 7.7e-07 58.9 242 30.2
A03p58810 Brassica napus HOM05D010967 ORTHO05D017683 1.7e-06 57.8 87 44.8
A03p68630 Brassica napus HOM05D008277 ORTHO05D100657 3.8e-06 56.6 130 36.9
A05p29410 Brassica napus HOM05D008277 ORTHO05D016104 6.5e-06 55.8 108 39.8
BraA07t28506Z Brassica rapa HOM05D010967 ORTHO05D108156 8.5e-06 55.5 89 42.7


User provided reference genes

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