Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 4.7e-305 1050.4 546 100.0
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 2.6e-287 991.5 547 94.9
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 4.6e-276 954.1 561 90.9
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 3.9e-275 951.0 546 91.9
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 1.4e-269 932.6 546 91.4
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 8.3e-262 906.7 546 87.5
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 2.1e-249 865.5 546 83.5
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 3.6e-241 838.2 546 82.1
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 6.2e-241 837.4 546 81.5
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 1.4e-240 836.3 546 82.1
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 1.1e-218 763.5 557 74.0
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 2.5e-205 719.2 546 69.6
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 2.1e-164 583.2 546 57.7
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.8e-163 580.1 546 56.8
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 3.0e-163 579.3 546 57.0
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 7.5e-162 574.7 546 56.4
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 2.9e-161 572.8 546 55.9
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 2.4e-160 569.7 547 56.9
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 5.4e-160 568.5 545 56.9
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 9.2e-160 567.8 546 55.3
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 3.5e-159 565.8 547 56.5
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 1.7e-158 563.5 547 55.0
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 3.9e-158 562.4 546 55.9
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 5.0e-158 562.0 547 53.4
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 1.5e-157 560.5 547 54.5
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 1.9e-157 560.1 547 53.4
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 7.3e-157 558.1 547 56.5
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 2.1e-156 556.6 547 56.3
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.8e-156 556.2 503 58.4
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 6.2e-156 555.1 546 54.4
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 8.0e-156 554.7 547 53.2
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.2e-154 550.8 561 53.1
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 2.0e-154 550.1 550 56.0
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 7.5e-154 548.1 509 57.0
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.1e-152 544.3 547 53.9
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 1.1e-152 544.3 547 54.3
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 7.0e-152 541.6 510 58.2
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 2.0e-151 540.0 547 53.2
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 6.0e-151 538.5 553 54.1
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 3.9e-150 535.8 549 53.2
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 2.5e-149 533.1 547 53.9
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 9.5e-149 531.2 550 53.1
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 1.8e-147 526.9 551 54.1
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 1.2e-146 524.2 545 52.7
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 1.5e-146 523.9 560 52.3
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 2.0e-146 523.5 551 53.0
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 4.4e-146 522.3 550 52.2
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 5.8e-146 521.9 546 53.8
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 5.8e-146 521.9 546 53.8
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 2.9e-145 519.6 550 52.4
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 4.9e-145 518.8 547 52.7
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 6.4e-145 518.5 547 50.6
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 4.1e-144 515.8 547 51.9
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 5.4e-144 515.4 569 50.8
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.2e-143 514.2 561 52.9
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 1.6e-143 513.8 545 52.5
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 2.1e-143 513.5 569 50.6
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 4.7e-140 502.3 503 54.1
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 8.1e-140 501.5 589 49.2
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 1.4e-139 500.7 504 53.4
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.4e-139 500.0 515 54.0
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 3.4e-138 496.1 546 50.4
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 1.7e-137 493.8 546 50.2
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 4.9e-137 492.3 545 50.5
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 6.4e-137 491.9 545 50.3
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 1.1e-136 491.1 547 50.5
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 1.1e-136 491.1 545 50.3
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 9.2e-136 488.0 505 52.3
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 7.8e-135 485.0 504 51.6
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 1.9e-133 480.3 505 52.3
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 9.6e-133 478.0 537 49.3
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 1.2e-132 477.6 551 49.5
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 2.1e-132 476.9 486 54.3
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 6.2e-132 475.3 546 49.3
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 1.1e-131 474.6 659 43.9
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 3.1e-131 473.0 545 48.8
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 5.2e-131 472.2 546 49.1
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 7.6e-130 468.4 582 47.1
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 2.4e-128 463.4 593 46.7
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 3.2e-128 463.0 545 47.7
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.3e-126 457.6 545 48.4
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 3.6e-124 449.5 546 48.9
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 2.7e-119 433.3 483 49.3
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 7.4e-117 425.2 449 53.0
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 1.3e-116 424.5 440 52.0
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 6.2e-116 422.2 506 44.9
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 1.8e-115 420.6 506 44.5
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 9.3e-112 408.3 450 51.8
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 4.0e-107 392.9 389 55.8
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 1.6e-103 380.9 412 51.9
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 2.9e-97 360.1 406 51.7
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 9.7e-93 345.1 229 81.2
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.1e-88 331.6 425 46.4
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 4.7e-87 326.2 395 48.1
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 4.8e-84 316.2 513 36.6
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 3.0e-78 297.0 348 49.4
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 7.0e-75 285.8 290 53.1
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 7.0e-75 285.8 290 53.1
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 3.5e-74 283.5 348 47.4
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.7e-73 281.2 370 45.9
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 2.2e-68 264.2 539 33.0
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 6.3e-68 262.7 514 36.0
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 1.4e-67 261.5 341 47.2
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.1e-64 251.9 269 51.7
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 1.2e-63 248.4 241 56.0
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 8.0e-55 219.2 192 58.3
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 4.3e-48 196.8 286 44.8
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 5.2e-46 189.9 164 61.6
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.6e-42 178.3 447 30.9
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 1.1e-40 172.2 163 54.0
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 2.0e-37 161.4 294 37.1
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 3.4e-37 160.6 202 44.1
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.1e-27 129.0 130 52.3
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 1.0e-25 122.5 95 61.1
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 5.1e-25 120.2 128 51.6
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 7.6e-21 106.3 135 43.7
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.8e-15 87.8 94 46.8
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 1.8e-14 85.1 101 45.5
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 8.4e-12 76.3 78 44.9
Cre05.g246300 Chlamydomonas reinhardtii HOM05D005607 ORTHO05D008142 1.2e-10 72.4 238 28.2
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 2.1e-07 61.6 63 55.6


User provided reference genes

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