Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p50470 Brassica napus HOM05D008216 ORTHO05D012788 2.4e-259 899.0 763 100.0
BcaC05g28920 Brassica carinata HOM05D008216 ORTHO05D012788 2.4e-254 882.5 763 99.2
BolC5t33794H Brassica oleracea HOM05D008216 ORTHO05D012788 1.3e-239 833.6 763 95.3
A05p33490 Brassica napus HOM05D008216 ORTHO05D012788 1.6e-239 833.2 772 95.3
BraA05t22171Z Brassica rapa HOM05D008216 ORTHO05D012788 1.1e-238 830.5 778 94.1
Sp3g14290 Schrenkiella parvula HOM05D008216 ORTHO05D012788 3.0e-201 706.1 777 85.2
BcaB06g25696 Brassica carinata HOM05D008216 ORTHO05D012788 2.4e-190 669.8 772 84.1
C01p48410 Brassica napus HOM05D008216 ORTHO05D012788 3.4e-184 649.4 773 81.4
A01p38160 Brassica napus HOM05D008216 ORTHO05D012788 6.3e-183 645.2 777 81.3
BcaB04g20891 Brassica carinata HOM05D008216 ORTHO05D012788 1.6e-181 640.6 774 79.2
BraA01t03874Z Brassica rapa HOM05D008216 ORTHO05D012788 2.7e-181 639.8 779 80.6
BcaC09g48575 Brassica carinata HOM05D008216 ORTHO05D012788 1.3e-180 637.5 775 80.9
BolC1t04801H Brassica oleracea HOM05D008216 ORTHO05D012788 4.7e-178 629.0 804 77.5
Thhalv10020122m.g Eutrema salsugineum HOM05D008216 ORTHO05D012788 2.5e-163 580.1 792 77.0
Carub.0003s1569 Capsella rubella HOM05D008216 ORTHO05D012788 4.3e-163 579.3 787 69.9
AL3G28590 Arabidopsis lyrata HOM05D008216 ORTHO05D012788 8.6e-156 555.1 777 76.2
AT3G15950 Arabidopsis thaliana HOM05D008216 ORTHO05D012788 4.9e-143 512.7 780 70.0
CARHR091090 Cardamine hirsuta HOM05D008216 ORTHO05D012788 9.9e-120 435.3 769 54.2
C01p48420 Brassica napus HOM05D008216 ORTHO05D012788 3.9e-116 423.3 336 76.2
BcaC09g48573 Brassica carinata HOM05D008216 ORTHO05D012788 2.5e-115 420.6 462 71.2
Thhalv10011252m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 7.0e-81 306.2 779 58.2
Sp1g39030 Schrenkiella parvula HOM05D008216 ORTHO05D011188 3.8e-79 300.4 787 59.8
CARHR042550 Cardamine hirsuta HOM05D008216 ORTHO05D011188 6.5e-79 299.7 778 59.8
C06p13990 Brassica napus HOM05D008216 ORTHO05D011188 6.7e-76 289.7 782 55.4
BolC6t36576H Brassica oleracea HOM05D008216 ORTHO05D011188 6.7e-76 289.7 782 55.4
BolC6t35876H Brassica oleracea HOM05D008216 ORTHO05D011188 2.0e-75 288.1 781 54.0
BcaC08g43993 Brassica carinata HOM05D008216 ORTHO05D011188 5.7e-75 286.6 779 56.4
BraA06t23398Z Brassica rapa HOM05D008216 ORTHO05D011188 6.5e-71 273.1 779 54.2
AL1G60670 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 1.2e-69 268.9 785 59.1
A06p01810 Brassica napus HOM05D008216 ORTHO05D011188 1.2e-69 268.9 773 57.8
BcaB02g10995 Brassica carinata HOM05D008216 ORTHO05D011188 2.1e-69 268.1 780 46.8
Carub.0001s4140 Capsella rubella HOM05D008216 ORTHO05D011188 5.7e-67 260.0 789 55.8
C06p07930 Brassica napus HOM05D008216 ORTHO05D011188 1.7e-66 258.5 804 54.2
BcaC08g43426 Brassica carinata HOM05D008216 ORTHO05D011188 2.8e-66 257.7 790 53.9
A05p19020 Brassica napus HOM05D008216 ORTHO05D011188 2.0e-64 251.5 779 54.0
BraA05t20799Z Brassica rapa HOM05D008216 ORTHO05D011188 3.5e-64 250.8 781 52.9
AT1G52410 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 1.3e-63 248.8 779 56.1
Aa31LG10G2510 Aethionema arabicum HOM05D008216 ORTHO05D011188 8.0e-61 239.6 266 59.8
AT3G15960 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 6.8e-60 236.5 291 51.5
BcaC01g03848 Brassica carinata HOM05D008216 ORTHO05D011188 1.7e-50 205.3 283 46.6
BolC3t17077H Brassica oleracea HOM05D008216 ORTHO05D011188 1.7e-50 205.3 283 46.6
C03p47970 Brassica napus HOM05D008216 ORTHO05D011188 6.4e-50 203.4 269 47.6
THA.LOC104818006 Tarenaya hassleriana HOM05D008216 ORTHO05D011188 5.4e-49 200.3 291 46.0
BcaB04g18868 Brassica carinata HOM05D008216 ORTHO05D011188 1.1e-46 192.6 181 57.5
A01p38150 Brassica napus HOM05D008216 ORTHO05D011188 9.5e-46 189.5 287 41.8
BcaB04g20890 Brassica carinata HOM05D008216 ORTHO05D011188 1.2e-45 189.1 287 42.2
C01p48400 Brassica napus HOM05D008216 ORTHO05D011188 3.6e-45 187.6 275 42.5
BraA01t03873Z Brassica rapa HOM05D008216 ORTHO05D011188 3.6e-45 187.6 275 42.5
BolC1t04800H Brassica oleracea HOM05D008216 ORTHO05D011188 4.7e-45 187.2 271 42.8
BcaC09g48576 Brassica carinata HOM05D008216 ORTHO05D011188 5.2e-44 183.7 271 42.4
Thhalv10022078m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 6.8e-44 183.3 273 42.1
Sp3g14300 Schrenkiella parvula HOM05D008216 ORTHO05D011188 4.0e-36 157.5 245 41.2
Sp3g14310 Schrenkiella parvula HOM05D008216 ORTHO05D011188 6.0e-32 143.7 265 39.2
SpUN0970_0010 Schrenkiella parvula HOM05D008216 ORTHO05D011188 6.8e-28 130.2 277 39.7
AL3G28600 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 4.4e-27 127.5 106 63.2
CARHR090970 Cardamine hirsuta HOM05D008216 ORTHO05D011188 7.6e-27 126.7 181 44.2
Aa31LG10G2520 Aethionema arabicum HOM05D008216 ORTHO05D058766 7.1e-17 93.6 179 41.9
SpUn0637_0010 Schrenkiella parvula HOM05D008216 ORTHO05D011188 1.9e-06 58.9 112 40.2


User provided reference genes

Program Settings