Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p49180 Brassica napus HOM05D008745 ORTHO05D010941 8.0e-103 377.1 191 100.0
BcaC05g28814 Brassica carinata HOM05D008745 ORTHO05D010941 1.1e-96 356.7 182 98.9
BraA05t22077Z Brassica rapa HOM05D008745 ORTHO05D010941 1.1e-94 350.1 187 94.1
BolC5t33659H Brassica oleracea HOM05D008745 ORTHO05D010941 1.4e-94 349.7 182 97.3
A05p32510 Brassica napus HOM05D008745 ORTHO05D010941 2.0e-93 345.9 187 93.6
BcaB06g25814 Brassica carinata HOM05D008745 ORTHO05D010941 3.5e-82 308.5 191 84.3
Thhalv10021601m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 2.2e-60 236.1 186 64.0
Sp3g15450 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.9e-56 223.0 187 60.4
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 2.9e-52 209.1 187 59.4
CARHR092500 Cardamine hirsuta HOM05D008745 ORTHO05D010941 2.5e-51 206.1 186 59.7
Sp3g15440 Schrenkiella parvula HOM05D008745 ORTHO05D010941 3.1e-46 189.1 190 54.2
AT3G17227 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 1.3e-44 183.7 188 52.1
Thhalv10022084m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 1.4e-43 180.3 168 53.0
BcaB06g25813 Brassica carinata HOM05D008745 ORTHO05D010941 4.2e-43 178.7 187 50.8
Carub.0003s2924 Capsella rubella HOM05D008745 ORTHO05D010941 7.9e-42 174.5 183 49.2
BcaC05g28818 Brassica carinata HOM05D008745 ORTHO05D010941 1.0e-41 174.1 187 48.1
C05p49220 Brassica napus HOM05D008745 ORTHO05D010941 1.0e-41 174.1 187 48.1
Carub.0002s1162 Capsella rubella HOM05D008745 ORTHO05D010941 1.0e-41 174.1 191 49.2
AL3G30260 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 2.3e-41 172.9 187 50.3
AT3G17225 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 5.1e-41 171.8 186 50.5
BolC5t33663H Brassica oleracea HOM05D008745 ORTHO05D010941 5.1e-41 171.8 187 48.1
A05p32570 Brassica napus HOM05D008745 ORTHO05D010941 1.1e-40 170.6 187 47.6
AT3G17230 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 1.9e-40 169.9 187 48.7
BraA05t22081Z Brassica rapa HOM05D008745 ORTHO05D010941 2.5e-40 169.5 187 47.6
Carub.0006s2723 Capsella rubella HOM05D008745 ORTHO05D010941 1.6e-39 166.8 187 47.1
Carub.0002s0897 Capsella rubella HOM05D008745 ORTHO05D010941 7.7e-37 157.9 184 47.8
BcaB04g18935 Brassica carinata HOM05D008745 ORTHO05D010941 5.0e-36 155.2 187 49.7
Carub.0006s2544 Capsella rubella HOM05D008745 ORTHO05D010941 3.9e-33 145.6 187 44.9
A03p40110 Brassica napus HOM05D008745 ORTHO05D010941 6.3e-31 138.3 188 47.9
AL3G30270 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.8e-30 136.7 187 41.7
BcaC01g03777 Brassica carinata HOM05D008745 ORTHO05D010941 5.3e-30 135.2 188 46.8
BolC3t17147H Brassica oleracea HOM05D008745 ORTHO05D010941 2.6e-29 132.9 191 47.1
C03p48680 Brassica napus HOM05D008745 ORTHO05D010941 1.0e-28 131.0 188 46.3
BraA03t13161Z Brassica rapa HOM05D008745 ORTHO05D010941 1.0e-28 131.0 188 45.7
BolC1t05672H Brassica oleracea HOM05D008745 ORTHO05D010941 1.0e-20 104.4 188 33.5
Sp3g04630 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.3e-20 104.0 186 33.9
BraA01t04492Z Brassica rapa HOM05D008745 ORTHO05D010941 1.1e-19 100.9 179 34.1
AT2G15345 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 3.6e-18 95.9 120 41.7
BcaC09g47846 Brassica carinata HOM05D008745 ORTHO05D010941 1.0e-17 94.4 139 38.1
Thhalv10022010m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 3.0e-17 92.8 147 35.4
AL3G16450 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.5e-16 90.5 179 34.6
AT3G05741 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 1.4e-14 84.0 190 30.5
AL3G47110 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.7e-12 77.0 97 44.3
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.5e-11 73.9 164 31.7
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 3.6e-10 69.3 165 32.1
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 6.1e-10 68.6 149 32.2
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 1.4e-09 67.4 171 32.7
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 4.4e-08 62.4 154 29.9
CAN.G338.43 Capsicum annuum HOM05D003146 ORTHO05D001819 1.7e-07 60.5 130 30.8
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 4.8e-07 58.9 144 29.9
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 4.8e-07 58.9 173 30.1
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 8.3e-07 58.2 189 27.5
QL04p007226 Quercus lobata HOM05D003146 ORTHO05D001819 1.8e-06 57.0 179 25.7
Rhsim06G0181100 Rhododendron simsii HOM05D009438 ORTHO05D001819 4.1e-06 55.8 162 30.9
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 7.0e-06 55.1 101 34.7


User provided reference genes

Program Settings