Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p48310 Brassica napus HOM05D002225 ORTHO05D002271 4.7e-73 277.7 135 100.0
BolC5t33564H Brassica oleracea HOM05D002225 ORTHO05D002271 1.9e-45 186.0 150 69.3
BcaC06g32232 Brassica carinata HOM05D002225 ORTHO05D002271 9.2e-37 157.1 115 71.3
C09p71470 Brassica napus HOM05D002225 ORTHO05D002271 9.2e-37 157.1 115 71.3
BolC9t59910H Brassica oleracea HOM05D002225 ORTHO05D002271 9.2e-37 157.1 115 71.3
A10p30960 Brassica napus HOM05D002225 ORTHO05D002271 3.5e-36 155.2 115 70.4
BraA10t45141Z Brassica rapa HOM05D002225 ORTHO05D002271 3.5e-36 155.2 115 70.4
Thhalv10013906m.g Eutrema salsugineum HOM05D002225 ORTHO05D002271 5.6e-34 147.9 115 67.0
AL6G15070 Arabidopsis lyrata HOM05D002225 ORTHO05D002271 1.8e-32 142.9 115 65.2
AT5G05230 Arabidopsis thaliana HOM05D002225 ORTHO05D002271 6.9e-32 141.0 115 64.3
Carub.0006s0416 Capsella rubella HOM05D002225 ORTHO05D002271 1.5e-31 139.8 115 64.3
CARHR208000 Cardamine hirsuta HOM05D002225 ORTHO05D002271 5.4e-29 131.3 115 63.5
Aa31LG11G6080 Aethionema arabicum HOM05D002225 ORTHO05D002271 1.7e-27 126.3 115 60.0
THA.LOC104826871 Tarenaya hassleriana HOM05D002225 ORTHO05D002271 3.1e-24 115.5 82 72.0
THA.LOC104816508 Tarenaya hassleriana HOM05D002225 ORTHO05D002271 2.0e-23 112.8 105 61.0
MSTRG.170 Avicennia marina HOM05D002225 ORTHO05D002271 5.1e-19 98.2 115 48.7
Rhsim03G0152200 Rhododendron simsii HOM05D002225 ORTHO05D002271 5.1e-19 98.2 119 45.4
Rhsim03G0152600 Rhododendron simsii HOM05D002225 ORTHO05D002271 2.5e-18 95.9 119 44.5
Cc02_g05360 Coffea canephora HOM05D002225 ORTHO05D002271 5.6e-18 94.7 119 46.2
FvH4_7g25940 Fragaria vesca HOM05D002225 ORTHO05D002271 5.6e-18 94.7 82 62.2
FAN01G0750 Fragaria x ananassa HOM05D002225 ORTHO05D002271 5.6e-18 94.7 82 62.2
FAN03G1063 Fragaria x ananassa HOM05D002225 ORTHO05D002271 5.6e-18 94.7 82 62.2
FAN06G1908 Fragaria x ananassa HOM05D002225 ORTHO05D002271 5.6e-18 94.7 82 62.2
FAN10G3396 Fragaria x ananassa HOM05D002225 ORTHO05D002271 5.6e-18 94.7 82 62.2
Dinv21847 Davidia involucrata HOM05D002225 ORTHO05D002271 2.8e-17 92.4 81 59.3
Peaxi162Scf00167g01215 Petunia axillaris HOM05D002225 ORTHO05D002271 2.8e-17 92.4 115 48.7
RcHm_v2.0_Chr1g0372321 Rosa chinensis HOM05D002225 ORTHO05D002271 2.8e-17 92.4 82 61.0
Atru.chr12.184 Acer truncatum HOM05D002225 ORTHO05D002271 3.6e-17 92.0 84 58.3
SalBow5G4698 Salvia bowleyana HOM05D002225 ORTHO05D002271 3.6e-17 92.0 82 58.5
Solyc05g052220.3 Solanum lycopersicum HOM05D002225 ORTHO05D002271 3.6e-17 92.0 81 59.3
FAN03G2164 Fragaria x ananassa HOM05D002225 ORTHO05D002271 4.8e-17 91.7 82 59.8
Lalb_Chr08g0239171 Lupinus albus HOM05D002225 ORTHO05D002271 4.8e-17 91.7 82 59.8
Nn2g10301 Nelumbo nucifera HOM05D002225 ORTHO05D002271 4.8e-17 91.7 82 58.5
Lj1g0007571 Lotus japonicus HOM05D002225 ORTHO05D002271 6.2e-17 91.3 115 47.8
MD01G1167800 Malus domestica HOM05D002225 ORTHO05D002271 8.1e-17 90.9 82 59.8
Migut.F01243 Erythranthe guttata HOM05D002225 ORTHO05D002271 1.1e-16 90.5 115 44.3
Cpa.g.sc19.56 Carica papaya HOM05D002225 ORTHO05D002271 1.8e-16 89.7 82 57.3
Cfa001208 Carpinus fangiana HOM05D002225 ORTHO05D002271 1.8e-16 89.7 82 61.0
Oeu018735.1 Olea europaea HOM05D002225 ORTHO05D002271 1.8e-16 89.7 82 57.3
PGSC0003DMG402011656 Solanum tuberosum HOM05D002225 ORTHO05D002271 2.4e-16 89.4 81 58.0
VMungo1309G0791 Vigna mungo HOM05D002225 ORTHO05D002271 2.4e-16 89.4 105 48.6
CSS0031158 Camellia sinensis var. sinensis HOM05D002225 ORTHO05D002271 3.1e-16 89.0 82 57.3
Nitab4.5_0000375g0260 Nicotiana tabacum HOM05D002225 ORTHO05D002271 4.0e-16 88.6 82 57.3
vmacro06892 Vaccinium macrocarpon HOM05D002225 ORTHO05D002271 4.0e-16 88.6 84 53.6
Glyma.04G222600 Glycine max HOM05D002225 ORTHO05D002271 6.9e-16 87.8 82 58.5
Glyma.06G142700 Glycine max HOM05D002225 ORTHO05D002271 6.9e-16 87.8 82 58.5
Phvul.009G043900 Phaseolus vulgaris HOM05D002225 ORTHO05D002271 6.9e-16 87.8 82 57.3
MSTRG.27259 Avicennia marina HOM05D002225 ORTHO05D002271 9.0e-16 87.4 114 45.6
Ciclev10031722m.g Citrus clementina HOM05D002225 ORTHO05D002271 9.0e-16 87.4 82 57.3
Haze_17358 Corylus avellana HOM05D002225 ORTHO05D002271 9.0e-16 87.4 82 59.8
CANSAT56G2293 Cannabis sativa HOM05D002225 ORTHO05D002271 1.2e-15 87.0 82 57.3
Sopen05g030760 Solanum pennellii HOM05D002225 ORTHO05D002271 1.2e-15 87.0 81 56.8
GSVIVG01032672001 Vitis vinifera HOM05D002225 ORTHO05D002271 1.5e-15 86.7 82 56.1
CiPaw.01G306700 Carya illinoinensis HOM05D002225 ORTHO05D002271 2.0e-15 86.3 84 54.8
TAR623G0431 Trochodendron aralioides HOM05D002225 ORTHO05D002271 2.6e-15 85.9 81 56.8
TPR.G16112 Trifolium pratense HOM05D002225 ORTHO05D002271 3.4e-15 85.5 82 59.8
Actinidia13647 Actinidia chinensis HOM05D002225 ORTHO05D002271 4.5e-15 85.1 82 53.7
Aqoxy4G02423 Aquilegia oxysepala HOM05D002225 ORTHO05D002271 4.5e-15 85.1 82 54.9
EL10Ac2g02646 Beta vulgaris HOM05D002225 ORTHO05D002271 4.5e-15 85.1 82 56.1
COL.COLO4_19417 Corchorus olitorius HOM05D002225 ORTHO05D002271 4.5e-15 85.1 86 53.5
CsaV3_3G044610 Cucumis sativus L. HOM05D002225 ORTHO05D002271 4.5e-15 85.1 82 56.1
HanXRQChr07g0204131 Helianthus annuus HOM05D002225 ORTHO05D002271 4.5e-15 85.1 115 43.5
SGA_v2.0_scaffold160G37717 Striga asiatica HOM05D002225 ORTHO05D002271 4.5e-15 85.1 139 39.6
Lsat_1_v5_gn_9_60121 Lactuca sativa HOM05D002225 ORTHO05D002271 5.8e-15 84.7 82 54.9
MBI15_g01600_MAGBIO Magnolia biondii HOM05D002225 ORTHO05D002271 5.8e-15 84.7 86 51.2
Manes.10G001500 Manihot esculenta HOM05D002225 ORTHO05D002271 5.8e-15 84.7 82 58.5
MELO3C018256.2 Cucumis melo HOM05D002225 ORTHO05D002271 7.6e-15 84.3 82 54.9
TWI73G0482 Tripterygium wilfordii HOM05D002225 ORTHO05D002271 7.6e-15 84.3 84 56.0
VMungo1309G3021 Vigna mungo HOM05D002225 ORTHO05D002271 7.6e-15 84.3 80 56.2
CsaV3_5G010960 Cucumis sativus L. HOM05D002225 ORTHO05D002271 1.3e-14 83.6 82 57.3
Medtr3g093960 Medicago truncatula HOM05D002225 ORTHO05D002271 1.3e-14 83.6 82 58.5
Potri.019G058300 Populus trichocarpa HOM05D002225 ORTHO05D002271 1.3e-14 83.6 81 56.8
Actinidia31627 Actinidia chinensis HOM05D002225 ORTHO05D002271 1.7e-14 83.2 82 54.9
DCAR_018038 Daucus carota HOM05D002225 ORTHO05D002271 1.7e-14 83.2 82 51.2
MD07G1233800 Malus domestica HOM05D002225 ORTHO05D002271 1.7e-14 83.2 82 56.1
RcHm_v2.0_Chr1g0369621 Rosa chinensis HOM05D002225 ORTHO05D002271 1.7e-14 83.2 82 57.3
Duzib106G1786 Durio zibethinus HOM05D002225 ORTHO05D002271 2.2e-14 82.8 86 52.3
ATR1127G185 Amborella trichopoda HOM05D002225 ORTHO05D002271 3.8e-14 82.0 86 50.0
Hma1.2p1_0264F.1_g106150 Hydrangea macrophylla HOM05D002225 ORTHO05D002271 4.9e-14 81.6 82 52.4
Nn5g26846 Nelumbo nucifera HOM05D002225 ORTHO05D002271 6.4e-14 81.3 82 56.1
Psat5g068760 Pisum sativum HOM05D002225 ORTHO05D002271 6.4e-14 81.3 82 56.1
THA.LOC104813586 Tarenaya hassleriana HOM05D002225 ORTHO05D002271 6.4e-14 81.3 117 40.2
AUR62030609 Chenopodium quinoa HOM05D002225 ORTHO05D002271 8.4e-14 80.9 82 51.2
Gohir.A13G006400 Gossypium hirsutum HOM05D002225 ORTHO05D002271 8.4e-14 80.9 81 54.3
Sabra19G0073700 Salix brachista HOM05D002225 ORTHO05D002271 8.4e-14 80.9 81 55.6
Thecc.10G179500 Theobroma cacao HOM05D002225 ORTHO05D002271 8.4e-14 80.9 81 53.1
arahy.Tifrunner.gnm1.ann1.L24DBG Arachis hypogaea HOM05D002225 ORTHO05D002271 1.1e-13 80.5 92 52.2
AUR62024935 Chenopodium quinoa HOM05D002225 ORTHO05D002271 1.1e-13 80.5 82 51.2
unitig_736.g22956 Utricularia gibba HOM05D002225 ORTHO05D002271 1.1e-13 80.5 104 48.1
Gorai.013G006800 Gossypium raimondii HOM05D002225 ORTHO05D002271 1.4e-13 80.1 88 51.1
arahy.Tifrunner.gnm1.ann1.4SU7B4 Arachis hypogaea HOM05D002225 ORTHO05D002271 1.9e-13 79.7 92 52.2
Hund15816 Selenicereus undatus HOM05D002225 ORTHO05D002271 1.9e-13 79.7 83 51.8
HanXRQChr15g0493731 Helianthus annuus HOM05D002225 ORTHO05D002271 2.4e-13 79.3 82 56.1
TWI53G0084 Tripterygium wilfordii HOM05D002225 ORTHO05D002271 3.2e-13 79.0 107 44.9
HPP92_026797 Vanilla planifolia HOM05D002225 ORTHO05D002271 4.2e-13 78.6 107 44.9
Gohir.D04G012600 Gossypium hirsutum HOM05D002225 ORTHO05D002271 7.1e-13 77.8 86 47.7
Gorai.012G014900 Gossypium raimondii HOM05D002225 ORTHO05D002271 7.1e-13 77.8 86 47.7
HPP92_000772 Vanilla planifolia HOM05D002225 ORTHO05D002271 7.1e-13 77.8 107 44.9
Sc11g0005850 Simmondsia chinensis HOM05D002225 ORTHO05D002271 9.3e-13 77.4 82 53.7
Gohir.D13G006600 Gossypium hirsutum HOM05D002225 ORTHO05D002271 1.2e-12 77.0 88 51.1
ECA238G4625 Erigeron canadensis HOM05D002225 ORTHO05D002271 2.1e-12 76.3 115 41.7
Sed0009031 Sechium edule HOM05D002225 ORTHO05D002271 2.1e-12 76.3 82 54.9
CiPaw.02G198900 Carya illinoinensis HOM05D002225 ORTHO05D002271 2.7e-12 75.9 82 52.4
BcaB01g03525 Brassica carinata HOM05D002225 ORTHO05D002271 6.0e-12 74.7 117 40.2
Thhalv10016770m.g Eutrema salsugineum HOM05D002225 ORTHO05D002271 7.9e-12 74.3 117 42.7
Lsat_1_v5_gn_2_126241 Lactuca sativa HOM05D002225 ORTHO05D002271 7.9e-12 74.3 118 44.1
CDE04G1638 Ceratophyllum demersum HOM05D002225 ORTHO05D002271 1.0e-11 73.9 81 49.4
PSO339G3502 Papaver somniferum HOM05D002225 ORTHO05D002271 1.0e-11 73.9 110 43.6
PSO384G2911 Papaver somniferum HOM05D002225 ORTHO05D002271 1.0e-11 73.9 110 43.6
Sp4g22970 Schrenkiella parvula HOM05D002225 ORTHO05D002271 1.0e-11 73.9 117 40.2
QL08p064862 Quercus lobata HOM05D002225 ORTHO05D002271 1.3e-11 73.6 104 46.2
Eucgr.J00112 Eucalyptus grandis HOM05D002225 ORTHO05D002271 1.8e-11 73.2 82 50.0
A03p22850 Brassica napus HOM05D002225 ORTHO05D002271 2.3e-11 72.8 117 40.2
C03p27100 Brassica napus HOM05D002225 ORTHO05D002271 2.3e-11 72.8 117 40.2
Nitab4.5_0002279g0020 Nicotiana tabacum HOM05D002225 ORTHO05D002271 2.3e-11 72.8 121 39.7
ClCG07G005120 Citrullus lanatus HOM05D002225 ORTHO05D002271 3.0e-11 72.4 76 52.6
ECA232G4636 Erigeron canadensis HOM05D002225 ORTHO05D002271 3.0e-11 72.4 82 45.1
Carub.0004s2293 Capsella rubella HOM05D002225 ORTHO05D002271 3.9e-11 72.0 117 40.2
BcaC01g05390 Brassica carinata HOM05D002225 ORTHO05D002271 2.5e-10 69.3 118 39.0
Dinv34486 Davidia involucrata HOM05D002225 ORTHO05D002271 2.5e-10 69.3 82 50.0
TAR633G0281 Trochodendron aralioides HOM05D002225 ORTHO05D002271 3.3e-10 68.9 82 51.2
PGR044G0456 Punica granatum HOM05D002225 ORTHO05D002271 1.3e-09 67.0 86 46.5
AL4G38510 Arabidopsis lyrata HOM05D002225 ORTHO05D002271 2.1e-09 66.2 117 38.5
CARHR135750 Cardamine hirsuta HOM05D002225 ORTHO05D002271 6.2e-09 64.7 117 37.6
TAR636G1271 Trochodendron aralioides HOM05D002225 ORTHO05D002271 1.1e-08 63.9 71 49.3
Aa31LG3G1480 Aethionema arabicum HOM05D002225 ORTHO05D002271 1.8e-08 63.2 118 36.4
Sp6g37600 Schrenkiella parvula HOM05D002225 ORTHO05D002271 6.9e-08 61.2 67 49.3
AagrBONN_evm.TU.Sc2ySwM_228.3524 Anthoceros agrestis HOM05D002225 ORTHO05D002271 9.0e-08 60.8 87 41.4
Oeu063985.1 Olea europaea HOM05D002225 ORTHO05D002271 7.6e-07 57.8 89 44.9
SEGI_10171 Sequoiadendron giganteum HOM05D002225 ORTHO05D002271 1.7e-06 56.6 105 40.0
MELO3C020149.2 Cucumis melo HOM05D002225 ORTHO05D002271 2.9e-06 55.8 64 50.0


User provided reference genes

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