Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p47540 Brassica napus HOM05D004345 ORTHO05D005192 9.8e-42 172.9 81 100.0
A05p31330 Brassica napus HOM05D004345 ORTHO05D005192 2.3e-30 135.2 74 87.8
BraA05t21971Z Brassica rapa HOM05D004345 ORTHO05D005192 2.3e-30 135.2 74 87.8
Sp3g16450 Schrenkiella parvula HOM05D004345 ORTHO05D005192 2.9e-30 134.8 72 86.1
BcaB06g25876 Brassica carinata HOM05D004345 ORTHO05D005192 6.6e-30 133.7 72 87.5
C05p47630 Brassica napus HOM05D004345 ORTHO05D005192 1.9e-29 132.1 73 86.3
BolC5t33472H Brassica oleracea HOM05D004345 ORTHO05D005192 1.2e-28 129.4 73 84.9
C05p47510 Brassica napus HOM05D004345 ORTHO05D005192 1.8e-27 125.6 74 82.4
Thhalv10020051m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 9.8e-26 119.8 72 76.4
AL3G31560 Arabidopsis lyrata HOM05D004345 ORTHO05D005192 6.4e-25 117.1 72 75.0
Thhalv10003730m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 9.2e-24 113.2 72 70.8
Carub.0003s1810 Capsella rubella HOM05D004345 ORTHO05D005192 2.0e-23 112.1 72 70.8
AT3G18310 Arabidopsis thaliana HOM05D004345 ORTHO05D005192 2.7e-23 111.7 71 71.8
CARHR093680 Cardamine hirsuta HOM05D004345 ORTHO05D005192 4.6e-23 110.9 71 71.8
Aa31LG8G3600 Aethionema arabicum HOM05D004345 ORTHO05D005192 4.3e-21 104.4 73 64.4
A05p31320 Brassica napus HOM05D004345 ORTHO05D005192 1.7e-14 82.4 74 54.1
BraA05t21970Z Brassica rapa HOM05D004345 ORTHO05D005192 1.7e-14 82.4 74 54.1
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 1.1e-11 73.2 63 52.4
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.1e-08 63.2 65 44.6
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 1.1e-08 63.2 65 44.6
Dinv39346 Davidia involucrata HOM05D004345 ORTHO05D005192 1.9e-08 62.4 73 43.8
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 2.4e-08 62.0 64 42.2
Duzib116G0224 Durio zibethinus HOM05D004345 ORTHO05D005192 2.4e-08 62.0 60 46.7
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 2.4e-08 62.0 65 43.1
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 2.4e-08 62.0 65 43.1
Thecc.05G018000 Theobroma cacao HOM05D004345 ORTHO05D005192 2.4e-08 62.0 61 42.6
BcaB01g01503 Brassica carinata HOM05D004345 ORTHO05D005192 3.2e-08 61.6 36 80.6
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 3.2e-08 61.6 65 41.5
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 4.1e-08 61.2 52 51.9
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 2.7e-07 58.5 57 45.6
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 2.7e-07 58.5 65 36.9
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 2.7e-07 58.5 59 45.8
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 4.6e-07 57.8 57 45.6
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 4.6e-07 57.8 57 47.4
AUR62032951 Chenopodium quinoa HOM05D004345 ORTHO05D005192 4.6e-07 57.8 57 43.9
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 7.8e-07 57.0 65 38.5
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 7.8e-07 57.0 58 44.8
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 7.8e-07 57.0 69 37.7
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 1.3e-06 56.2 65 36.9
Ah.01g012750 Amaranthus hybridus HOM05D004345 ORTHO05D005192 1.7e-06 55.8 57 42.1
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 2.3e-06 55.5 57 42.1
CiPaw.12G047000 Carya illinoinensis HOM05D004345 ORTHO05D005192 3.0e-06 55.1 68 38.2
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 3.0e-06 55.1 57 45.6
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 3.0e-06 55.1 57 42.1
PGR044G2251 Punica granatum HOM05D004345 ORTHO05D005192 3.0e-06 55.1 72 34.7
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 3.9e-06 54.7 65 38.5
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 3.9e-06 54.7 65 38.5
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 3.9e-06 54.7 65 38.5
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 3.9e-06 54.7 65 38.5
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 3.9e-06 54.7 61 39.3
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 5.1e-06 54.3 65 38.5
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 5.1e-06 54.3 65 38.5
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 5.1e-06 54.3 57 42.1
Gohir.D11G289900 Gossypium hirsutum HOM05D004345 ORTHO05D005192 6.6e-06 53.9 50 44.0
Gorai.007G313800 Gossypium raimondii HOM05D004345 ORTHO05D005192 6.6e-06 53.9 50 44.0
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 6.6e-06 53.9 68 38.2
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 6.6e-06 53.9 57 43.9
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 6.6e-06 53.9 57 43.9
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 6.6e-06 53.9 57 43.9
SHI21683 Sapria himalayana HOM05D004345 ORTHO05D005192 6.6e-06 53.9 65 33.8
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 8.6e-06 53.5 58 43.1


User provided reference genes

Program Settings