Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p46330 Brassica napus HOM05D004269 ORTHO05D013520 1.9e-69 265.8 141 100.0
BcaC01g04800 Brassica carinata HOM05D004269 ORTHO05D013520 1.8e-67 259.2 141 97.2
C04p14230 Brassica napus HOM05D004269 ORTHO05D013520 5.2e-67 257.7 141 96.5
BolC5t30237H Brassica oleracea HOM05D004269 ORTHO05D013520 5.2e-67 257.7 141 96.5
C01p38510 Brassica napus HOM05D004269 ORTHO05D013520 1.2e-66 256.5 141 95.7
BolC5t33714H Brassica oleracea HOM05D004269 ORTHO05D013520 2.6e-66 255.4 141 95.7
C02p38620 Brassica napus HOM05D004269 ORTHO05D013520 2.2e-65 252.3 141 95.0
BcaC05g28037 Brassica carinata HOM05D004269 ORTHO05D013520 9.3e-64 246.9 147 91.2
BolC5t33363H Brassica oleracea HOM05D004269 ORTHO05D013520 1.6e-52 209.5 121 94.2
C07p30140 Brassica napus HOM05D004269 ORTHO05D013520 8.1e-52 207.2 118 94.9
C05p40550 Brassica napus HOM05D004269 ORTHO05D013520 4.5e-50 201.4 141 79.4
BolC6t36588H Brassica oleracea HOM05D004269 ORTHO05D013520 7.6e-50 200.7 114 93.0
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 5.0e-33 144.8 131 65.6
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 2.5e-32 142.5 131 64.9
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 2.5e-32 142.5 131 64.9
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 4.2e-32 141.7 131 64.9
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 2.1e-31 139.4 133 65.4
BcaC06g34343 Brassica carinata HOM05D004269 ORTHO05D013520 7.9e-31 137.5 101 74.3
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 1.1e-29 133.7 131 61.1
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 1.1e-29 133.7 131 61.1
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 1.1e-29 133.7 131 61.1
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 1.1e-29 133.7 131 61.1
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 1.1e-29 133.7 131 61.8
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 4.3e-29 131.7 131 60.3
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 1.3e-28 130.2 130 60.8
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 2.2e-28 129.4 131 60.3
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 9.1e-27 124.0 131 59.5
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 1.2e-26 123.6 128 60.9
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 1.5e-26 123.2 132 56.8
C06p14100 Brassica napus HOM05D004269 ORTHO05D013520 1.0e-25 120.6 67 94.0
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 4.2e-24 115.2 131 55.0
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 6.7e-22 107.8 131 50.4
C02p59220 Brassica napus HOM05D004269 ORTHO05D013520 5.7e-21 104.8 67 80.6
BcaC07g37609 Brassica carinata HOM05D004269 ORTHO05D013520 6.9e-19 97.8 79 68.4
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 8.5e-17 90.9 133 45.1
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 4.2e-16 88.6 129 46.5
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 1.6e-15 86.7 134 45.5
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 7.9e-15 84.3 111 48.6
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 1.0e-14 84.0 70 70.0
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 2.3e-14 82.8 133 45.1
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 8.8e-14 80.9 104 48.1
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 1.5e-13 80.1 104 48.1
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 2.0e-13 79.7 147 38.8
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 2.0e-13 79.7 148 41.9
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 2.6e-13 79.3 147 38.8
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 4.4e-13 78.6 110 45.5
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 4.4e-13 78.6 126 43.7
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 4.4e-13 78.6 64 65.6
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 9.7e-13 77.4 64 65.6
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 9.7e-13 77.4 131 41.2
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 9.7e-13 77.4 64 64.1
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 1.3e-12 77.0 124 43.5
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 1.3e-12 77.0 147 38.1
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 1.7e-12 76.6 104 47.1
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 1.7e-12 76.6 132 42.4
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 1.7e-12 76.6 133 44.4
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 2.2e-12 76.3 109 44.0
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 2.2e-12 76.3 64 64.1
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 2.8e-12 75.9 134 41.0
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 2.8e-12 75.9 132 43.2
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 2.8e-12 75.9 128 41.4
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 2.8e-12 75.9 131 40.5
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 3.7e-12 75.5 106 47.2
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 3.7e-12 75.5 126 41.3
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 6.3e-12 74.7 154 36.4
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 6.3e-12 74.7 64 59.4
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 6.3e-12 74.7 142 44.4
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 6.3e-12 74.7 131 40.5
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 8.2e-12 74.3 133 41.4
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 8.2e-12 74.3 107 45.8
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 8.2e-12 74.3 111 46.8
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 1.1e-11 73.9 138 40.6
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 1.8e-11 73.2 64 62.5
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 1.8e-11 73.2 64 59.4
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 1.8e-11 73.2 142 44.4
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 2.4e-11 72.8 64 59.4
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 2.4e-11 72.8 118 45.8
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 2.4e-11 72.8 158 38.0
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 2.4e-11 72.8 118 45.8
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 2.4e-11 72.8 64 60.9
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 2.4e-11 72.8 131 41.2
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 3.1e-11 72.4 64 59.4
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 3.1e-11 72.4 128 40.6
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 3.1e-11 72.4 128 40.6
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 3.1e-11 72.4 64 59.4
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 3.1e-11 72.4 64 59.4
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 3.1e-11 72.4 64 59.4
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 3.1e-11 72.4 64 60.9
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 4.1e-11 72.0 106 45.3
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 4.1e-11 72.0 64 60.9
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 4.1e-11 72.0 64 62.5
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 5.3e-11 71.6 64 57.8
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 5.3e-11 71.6 64 57.8
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 5.3e-11 71.6 130 41.5
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 5.3e-11 71.6 64 59.4
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 5.3e-11 71.6 64 60.9
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 7.0e-11 71.2 64 59.4
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 7.0e-11 71.2 108 47.2
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 9.1e-11 70.9 127 44.1
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 9.1e-11 70.9 122 41.0
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 1.2e-10 70.5 64 59.4
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 1.2e-10 70.5 133 39.1
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 1.2e-10 70.5 64 57.8
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 1.2e-10 70.5 61 60.7
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 1.2e-10 70.5 64 59.4
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 1.2e-10 70.5 130 40.8
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 1.6e-10 70.1 64 57.8
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.6e-10 70.1 128 39.1
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 1.6e-10 70.1 64 59.4
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 1.6e-10 70.1 64 60.9
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 1.6e-10 70.1 69 58.0
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 2.0e-10 69.7 64 57.8
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 2.0e-10 69.7 130 38.5
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 2.0e-10 69.7 109 42.2
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 2.6e-10 69.3 72 55.6
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 2.6e-10 69.3 64 59.4
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 2.6e-10 69.3 64 56.2
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 3.5e-10 68.9 68 58.8
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 3.5e-10 68.9 129 40.3
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 3.5e-10 68.9 64 59.4
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 3.5e-10 68.9 64 57.8
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 4.5e-10 68.6 127 37.8
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 4.5e-10 68.6 64 57.8
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 1.3e-09 67.0 64 56.2
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 1.7e-09 66.6 64 56.2
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 6.5e-09 64.7 64 53.1
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 6.5e-09 64.7 61 57.4
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.5e-08 63.5 46 69.6
Potri.015G112400 Populus trichocarpa HOM05D004269 ORTHO05D007106 9.4e-08 60.8 73 50.7
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 1.2e-07 60.5 64 53.1
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 1.8e-06 56.6 64 50.0
PRCOL_00001324 Prasinoderma coloniale HOM05D004269 ORTHO05D007106 5.2e-06 55.1 64 54.7
BcaC04g20716 Brassica carinata HOM05D004269 ORTHO05D013520 6.7e-06 54.7 79 45.6


User provided reference genes

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