Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p46300 Brassica napus HOM05D004230 ORTHO05D007976 2.9e-97 359.4 318 100.0
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 5.0e-73 278.9 318 54.1
C03p27690 Brassica napus HOM05D004230 ORTHO05D007976 3.0e-70 269.6 291 95.2
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 1.1e-64 251.1 138 92.0
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-63 247.7 138 91.3
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 1.2e-63 247.7 138 91.3
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 1.6e-63 247.3 138 90.6
BolC8t50525H Brassica oleracea HOM05D004230 ORTHO05D027608 1.6e-63 247.3 138 90.6
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 7.9e-63 245.0 135 92.6
BolC3t20713H Brassica oleracea HOM05D004230 ORTHO05D007976 4.4e-61 239.2 131 93.1
BolC5t33360H Brassica oleracea HOM05D004230 ORTHO05D007976 5.7e-61 238.8 135 91.1
BcaC07g39750 Brassica carinata HOM05D004230 ORTHO05D027608 1.1e-56 224.6 136 85.3
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 1.7e-49 200.7 131 74.0
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 3.2e-40 169.9 139 59.7
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 5.5e-40 169.1 133 58.6
A06p33140 Brassica napus HOM05D004230 ORTHO05D007976 9.4e-40 168.3 138 60.1
BolC3t17228H Brassica oleracea HOM05D004230 ORTHO05D007976 9.4e-40 168.3 138 60.1
C05p44100 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-39 167.9 108 70.4
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-39 167.9 138 58.7
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 1.2e-39 167.9 138 58.7
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 1.6e-39 167.5 138 59.4
BraA01t02220Z Brassica rapa HOM05D004230 ORTHO05D007976 8.0e-39 165.2 138 57.2
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 1.4e-38 164.5 108 69.4
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 1.4e-38 164.5 108 69.4
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 2.0e-37 160.6 108 68.5
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 2.0e-37 160.6 108 68.5
BcaB01g00472 Brassica carinata HOM05D004230 ORTHO05D007976 7.5e-37 158.7 138 55.8
BolC8t50322H Brassica oleracea HOM05D004230 ORTHO05D007976 7.5e-37 158.7 138 55.8
BcaB04g18000 Brassica carinata HOM05D004230 ORTHO05D007976 8.3e-36 155.2 108 65.7
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 7.0e-35 152.1 109 61.5
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 3.5e-34 149.8 330 57.0
AT3G32904 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 2.3e-30 137.1 95 63.2
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 2.0e-29 134.0 65 93.8
AL7G46530 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.9e-28 129.4 119 54.6
AT1G43720 Arabidopsis thaliana HOM05D004230 ORTHO05D018474 7.0e-27 125.6 112 52.7
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 1.0e-25 121.7 139 45.3
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 4.3e-24 116.3 105 51.4
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-23 114.8 318 63.2
BcaC09g49449 Brassica carinata HOM05D004230 ORTHO05D007976 6.1e-23 112.5 65 84.6
BcaC01g03708 Brassica carinata HOM05D004230 ORTHO05D007976 1.4e-22 111.3 66 75.8
Carub.0005s0823 Capsella rubella HOM05D004230 ORTHO05D007976 1.8e-22 110.9 124 46.8
Sp3g24280 Schrenkiella parvula HOM05D004230 ORTHO05D007976 3.1e-22 110.2 129 46.5
AT3G42870 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 7.5e-21 105.5 103 50.5
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 7.5e-21 105.5 135 40.7
BolC2t12231H Brassica oleracea HOM05D004230 ORTHO05D018474 2.9e-20 103.6 131 42.0
BcaB07g32180 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-19 101.7 59 79.7
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 1.1e-19 101.7 82 56.1
BraA06t25864Z Brassica rapa HOM05D004230 ORTHO05D018474 2.4e-19 100.5 92 50.0
Sp2g07590 Schrenkiella parvula HOM05D004230 ORTHO05D007976 4.1e-19 99.8 95 54.7
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 9.2e-19 98.6 110 46.4
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 1.6e-18 97.8 104 43.3
BraA05t21003Z Brassica rapa HOM05D004230 ORTHO05D041249 4.6e-18 96.3 104 42.3
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 8.6e-17 92.0 110 44.5
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 7.3e-16 89.0 83 48.2
AL3G43870 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.1e-15 87.4 79 48.1
Carub.0007s3044 Capsella rubella HOM05D004230 ORTHO05D007976 2.8e-15 87.0 77 54.5
AT3G30520 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 6.2e-15 85.9 75 52.0
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 6.2e-15 85.9 56 67.9
AL6G45690 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 3.1e-14 83.6 79 46.8
Sp1g33580 Schrenkiella parvula HOM05D004230 ORTHO05D007976 8.9e-14 82.0 110 40.0
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 4.4e-13 79.7 61 57.4
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 9.8e-13 78.6 46 80.4
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 5.4e-11 72.8 62 54.8
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 5.4e-11 72.8 62 54.8
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 9.2e-11 72.0 120 35.0
BraA06t26246Z Brassica rapa HOM05D004230 ORTHO05D042725 1.6e-10 71.2 47 63.8
C08p27080 Brassica napus HOM05D004230 ORTHO05D042725 6.0e-10 69.3 47 61.7
C08p01070 Brassica napus HOM05D004230 ORTHO05D007976 7.8e-10 68.9 54 64.8
BcaC01g02567 Brassica carinata HOM05D004230 ORTHO05D018474 2.5e-08 63.9 56 48.2
BolC2t09156H Brassica oleracea HOM05D004230 ORTHO05D104778 2.5e-08 63.9 47 78.7
BolC3t18593H Brassica oleracea HOM05D004230 ORTHO05D018474 2.5e-08 63.9 56 48.2
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 8.1e-07 58.9 71 40.8
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 5.2e-06 56.2 33 69.7


User provided reference genes

Program Settings