Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p44920 Brassica napus HOM05D005682 ORTHO05D007050 5.9e-132 474.2 233 100.0
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 3.3e-106 388.7 196 96.9
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 4.1e-85 318.5 198 82.8
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 1.3e-83 313.5 198 82.3
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 5.1e-83 311.6 198 81.8
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 1.1e-72 277.3 205 74.1
C05p45010 Brassica napus HOM05D005682 ORTHO05D007050 4.9e-70 268.5 162 83.3
A05p29780 Brassica napus HOM05D005682 ORTHO05D007050 2.1e-68 263.1 180 76.1
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 6.0e-68 261.5 201 68.2
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 1.7e-67 260.0 196 69.4
BraA05t21816Z Brassica rapa HOM05D005682 ORTHO05D007050 3.6e-65 252.3 165 80.0
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 2.9e-62 242.7 136 86.0
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 8.4e-62 241.1 196 65.8
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 5.8e-55 218.4 170 66.5
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 1.1e-45 187.6 206 50.5
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 7.1e-45 184.9 203 55.7
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 5.1e-43 178.7 167 61.1
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 2.4e-32 143.3 202 41.1
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 1.2e-31 141.0 156 44.9
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 7.7e-31 138.3 177 40.1
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 1.0e-30 137.9 177 39.5
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 2.9e-30 136.3 193 38.3
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 8.5e-30 134.8 197 36.5
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 1.1e-29 134.4 208 39.4
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 1.9e-29 133.7 193 38.9
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 3.2e-29 132.9 208 36.1
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 7.2e-29 131.7 154 42.2
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 9.4e-29 131.3 158 43.0
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 1.2e-28 131.0 158 43.0
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 1.6e-28 130.6 152 43.4
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 1.6e-28 130.6 189 37.6
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 3.6e-28 129.4 158 41.8
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 3.6e-28 129.4 164 42.7
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 1.8e-27 127.1 165 40.0
Ciclev10030666m.g Citrus clementina HOM05D005682 ORTHO05D007050 3.0e-27 126.3 171 38.0
Manes.11G108701 Manihot esculenta HOM05D005682 ORTHO05D007050 6.7e-27 125.2 156 41.0
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 8.8e-27 124.8 184 37.5
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 8.8e-27 124.8 169 36.7
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 1.1e-26 124.4 185 36.2
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 1.5e-26 124.0 155 38.7
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 2.0e-26 123.6 204 38.2
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 2.6e-26 123.2 188 37.8
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 2.6e-26 123.2 177 36.7
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 2.6e-26 123.2 188 37.2
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 3.3e-26 122.9 193 36.8
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 1.3e-25 120.9 169 37.9
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 2.2e-25 120.2 169 37.9
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 2.8e-25 119.8 172 38.4
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 3.7e-25 119.4 203 36.5
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 3.7e-25 119.4 150 37.3
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 6.3e-25 118.6 199 36.7
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 1.8e-24 117.1 169 37.3
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 3.1e-24 116.3 154 39.6
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 9.1e-24 114.8 223 33.2
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 1.5e-23 114.0 198 32.8
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 3.4e-23 112.8 154 40.9
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 1.1e-21 107.8 196 35.2
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 1.1e-21 107.8 155 38.7
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 1.4e-21 107.5 173 36.4
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 1.4e-21 107.5 172 34.3
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 1.9e-21 107.1 231 31.2
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 5.5e-21 105.5 192 33.3
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 5.5e-21 105.5 196 32.7
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 5.5e-21 105.5 186 33.9
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea HOM05D005682 ORTHO05D007050 1.2e-20 104.4 197 34.0
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.1e-20 103.6 172 35.5
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 2.1e-20 103.6 200 33.5
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 3.6e-20 102.8 211 32.2
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 1.0e-19 101.3 174 30.5
Peaxi162Scf00363g00730 Petunia axillaris HOM05D005682 ORTHO05D007050 2.3e-19 100.1 168 32.1
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 3.0e-19 99.8 235 29.8
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 6.7e-19 98.6 193 30.6
CAN.G157.17 Capsicum annuum HOM05D005682 ORTHO05D007050 1.1e-18 97.8 117 35.9
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 1.5e-18 97.4 127 37.0
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 2.0e-18 97.1 196 32.1
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 2.0e-18 97.1 185 31.9
CSS0001307 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 2.6e-18 96.7 177 33.3
Solyc02g055460.3 Solanum lycopersicum HOM05D005682 ORTHO05D007050 3.3e-18 96.3 168 31.0
Cc11_g04390 Coffea canephora HOM05D005682 ORTHO05D007050 4.4e-18 95.9 138 36.2
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 7.4e-18 95.1 192 30.7
Sopen02g009170 Solanum pennellii HOM05D005682 ORTHO05D007050 7.4e-18 95.1 168 30.4
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 2.8e-17 93.2 174 31.0
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 3.7e-17 92.8 211 30.3
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 6.3e-17 92.0 163 31.9
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 8.2e-17 91.7 198 28.3
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 1.4e-16 90.9 179 31.3
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.2e-15 87.8 203 27.6
CARHR095300 Cardamine hirsuta HOM05D005682 ORTHO05D007050 2.6e-15 86.7 113 44.2
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 4.5e-15 85.9 125 31.2
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 4.5e-15 85.9 138 34.1
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 1.0e-14 84.7 137 35.0
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 2.9e-14 83.2 147 34.0
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 6.5e-14 82.0 160 30.0
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 1.1e-13 81.3 196 29.6
SHI13894 Sapria himalayana HOM05D005682 ORTHO05D007050 4.4e-10 69.3 103 31.1
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 9.7e-10 68.2 133 28.6
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 4.8e-09 65.9 90 32.2


User provided reference genes

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