Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p44840 Brassica napus HOM05D005682 ORTHO05D007050 4.3e-35 150.6 67 100.0
A05p29780 Brassica napus HOM05D005682 ORTHO05D007050 2.0e-16 88.6 41 90.2
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 2.0e-16 88.6 41 90.2
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 3.4e-16 87.8 39 92.3
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 7.6e-16 86.7 41 87.8
BcaC05g28417 Brassica carinata HOM05D005682 ORTHO05D007050 7.6e-16 86.7 41 87.8
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 7.6e-16 86.7 41 87.8
C05p45010 Brassica napus HOM05D005682 ORTHO05D007050 9.9e-16 86.3 41 87.8
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 2.2e-15 85.1 39 84.6
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 1.1e-14 82.8 39 82.1
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 1.1e-14 82.8 39 82.1
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 7.1e-14 80.1 39 79.5
CARHR095300 Cardamine hirsuta HOM05D005682 ORTHO05D007050 3.0e-12 74.7 39 74.4
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 3.9e-12 74.3 39 74.4
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 9.6e-11 69.7 39 66.7
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 1.4e-09 65.9 38 63.2
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 3.2e-06 54.7 38 52.6
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 4.2e-06 54.3 38 52.6
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 4.2e-06 54.3 40 52.5
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 5.5e-06 53.9 36 52.8
COL.COLO4_08120 Corchorus olitorius HOM05D005682 ORTHO05D007050 9.3e-06 53.1 38 55.3


User provided reference genes

Program Settings