Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 1.8e-66 255.8 128 100.0
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 4.2e-63 244.6 128 96.9
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 2.1e-62 242.3 128 95.3
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 3.9e-61 238.0 128 93.8
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.1e-60 236.5 125 95.2
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 1.6e-59 232.6 128 93.0
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 6.5e-56 220.7 130 90.0
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 1.6e-54 216.1 129 86.0
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.9e-52 209.1 126 87.3
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 3.3e-52 208.4 126 84.9
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 1.3e-48 196.4 131 79.4
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 3.1e-42 175.3 126 74.6
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 3.2e-39 165.2 131 71.0
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 9.7e-36 153.7 127 66.9
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.7e-35 152.9 125 67.2
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 2.2e-35 152.5 125 65.6
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.8e-35 151.4 125 65.6
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 4.8e-35 151.4 125 65.6
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 6.3e-35 151.0 125 66.4
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 6.3e-35 151.0 125 67.2
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 8.2e-35 150.6 125 67.2
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.1e-34 150.2 125 65.6
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 1.4e-34 149.8 79 91.1
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 2.4e-34 149.1 102 73.5
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 3.1e-34 148.7 120 67.5
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 4.1e-34 148.3 125 66.4
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 5.3e-34 147.9 134 63.4
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 6.9e-34 147.5 122 65.6
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.2e-33 146.7 96 74.0
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 1.5e-33 146.4 128 64.8
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.5e-33 146.4 127 64.6
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 2.6e-33 145.6 136 61.8
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 2.6e-33 145.6 127 63.0
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 3.4e-33 145.2 125 60.8
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 4.5e-33 144.8 81 84.0
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 5.9e-33 144.4 102 72.5
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 7.7e-33 144.1 107 69.2
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 7.7e-33 144.1 103 70.9
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 1.0e-32 143.7 81 85.2
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.0e-32 143.7 119 66.4
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 1.0e-32 143.7 125 63.2
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 1.7e-32 142.9 125 63.2
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 2.9e-32 142.1 126 65.1
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.9e-32 142.1 117 63.2
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 5.0e-32 141.4 103 69.9
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 6.5e-32 141.0 129 62.0
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 6.5e-32 141.0 79 84.8
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.1e-31 140.2 81 84.0
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.4e-31 139.8 125 64.0
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.4e-31 139.8 80 80.0
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 1.4e-31 139.8 133 61.7
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.4e-31 139.8 81 84.0
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.4e-31 139.8 81 82.7
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 3.2e-31 138.7 112 65.2
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 3.2e-31 138.7 106 66.0
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 4.2e-31 138.3 125 63.2
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.2e-31 138.3 108 67.6
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 4.2e-31 138.3 94 75.5
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 7.2e-31 137.5 119 69.7
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.2e-30 136.7 126 61.9
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.2e-30 136.7 73 91.8
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 1.6e-30 136.3 108 66.7
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.6e-30 136.3 108 66.7
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.6e-30 136.3 108 66.7
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 2.1e-30 136.0 81 81.5
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 2.7e-30 135.6 78 84.6
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 4.7e-30 134.8 107 65.4
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 4.7e-30 134.8 123 62.6
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 6.1e-30 134.4 125 59.2
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 6.1e-30 134.4 114 64.0
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 6.1e-30 134.4 114 64.0
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 7.9e-30 134.0 127 58.3
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 7.9e-30 134.0 78 84.6
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 1.0e-29 133.7 125 64.8
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 1.0e-29 133.7 72 90.3
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 2.3e-29 132.5 108 66.7
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 3.9e-29 131.7 123 64.2
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 5.1e-29 131.3 103 64.1
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 6.7e-29 131.0 69 85.5
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 2.0e-28 129.4 92 70.7
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 4.4e-28 128.3 122 57.4
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 4.4e-28 128.3 74 85.1
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 4.4e-28 128.3 76 78.9
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 1.7e-27 126.3 79 79.7
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 3.7e-27 125.2 83 74.7
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 3.7e-27 125.2 127 58.3
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 8.2e-27 124.0 133 54.9
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 1.1e-26 123.6 168 44.6
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 9.1e-26 120.6 128 55.5
AT2G05310 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 4.5e-25 118.2 78 82.1
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 1.7e-24 116.3 70 75.7
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 7.2e-23 110.9 72 77.8
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 1.2e-22 110.2 71 70.4
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 1.5e-20 103.2 49 98.0
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 7.4e-20 100.9 48 93.8
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.9e-15 86.3 126 43.7
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 3.2e-15 85.5 58 69.0
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 4.7e-14 81.6 73 52.1
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 3.1e-10 68.9 69 49.3
CARHR103080 Cardamine hirsuta HOM05D007442 ORTHO05D009284 3.5e-09 65.5 59 69.5


User provided reference genes

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