Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p42460 Brassica napus HOM05D000313 ORTHO05D032607 8.7e-93 343.6 168 100.0
BolC5t32976H Brassica oleracea HOM05D000313 ORTHO05D032607 2.3e-77 292.4 170 87.6
BcaC05g28270 Brassica carinata HOM05D000313 ORTHO05D032607 1.5e-60 236.5 118 100.0
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-15 85.9 159 37.1
C02p24380 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-14 82.4 137 38.7
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-13 80.5 162 34.0
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-13 79.7 152 37.5
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-13 79.7 152 37.5
BolC3t20344H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-13 79.3 126 40.5
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 6.8e-13 78.2 131 38.2
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-13 77.8 130 40.0
C07p20830 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-12 76.3 114 39.5
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-12 74.3 162 31.5
BraA03t15605Z Brassica rapa HOM05D000313 ORTHO05D000065 9.8e-12 74.3 131 35.9
BcaC05g28890 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-11 72.4 152 34.9
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 6.4e-11 71.6 151 32.5
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-10 70.9 152 35.5
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 1.1e-10 70.9 122 35.2
BraA09t37737Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-10 70.9 150 32.7
BcaC03g16977 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-10 70.5 109 38.5
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-10 70.5 102 42.2
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-10 70.1 153 31.4
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-10 70.1 153 31.4
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-10 70.1 156 32.7
C09p46520 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-10 68.9 108 40.7
BolC9t57505H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-10 68.9 108 40.7
BcaC05g25218 Brassica carinata HOM05D000313 ORTHO05D000065 5.4e-10 68.6 152 33.6
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-10 68.6 122 33.6
C06p13930 Brassica napus HOM05D028055 ORTHO05D027456 5.4e-10 68.6 102 43.1
BolC6t36573H Brassica oleracea HOM05D028055 ORTHO05D027456 5.4e-10 68.6 102 43.1
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 7.0e-10 68.2 152 32.2
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-10 68.2 152 32.9
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-10 68.2 152 32.9
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 9.2e-10 67.8 162 30.2
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 67.0 152 32.2
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 67.0 146 32.9
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 1.6e-09 67.0 151 31.1
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-09 66.6 153 31.4
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-09 66.6 146 33.6
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-09 66.2 152 32.2
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 66.2 146 33.6
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 66.2 146 33.6
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 66.2 156 30.8
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-09 65.9 156 32.1
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-09 65.9 152 33.6
C05p56930 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-09 65.9 103 44.7
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-09 65.5 142 35.2
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 7.8e-09 64.7 156 34.0
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 7.8e-09 64.7 152 28.9
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 7.8e-09 64.7 156 34.0
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-08 64.3 152 32.9
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-08 64.3 152 32.9
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-08 64.3 156 31.4
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-08 64.3 151 32.5
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-08 63.9 118 38.1
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-08 63.9 137 35.0
C03p44260 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-08 63.9 118 38.1
C07p34690 Brassica napus HOM05D000313 ORTHO05D015501 1.7e-08 63.5 97 45.4
BolC2t10974H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-08 63.5 110 37.3
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-08 63.5 156 30.1
BcaB05g23083 Brassica carinata HOM05D028055 ORTHO05D027456 2.3e-08 63.2 50 68.0
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 63.2 151 33.1
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 3.9e-08 62.4 127 36.2
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-08 62.0 130 33.1
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-08 62.0 152 31.6
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 5.0e-08 62.0 117 32.5
BolC4t27877H Brassica oleracea HOM05D000313 ORTHO05D000065 5.0e-08 62.0 84 45.2
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 5.0e-08 62.0 161 30.4
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-08 61.6 156 29.5
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 8.6e-08 61.2 166 32.5
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 8.6e-08 61.2 152 32.2
C04p27570 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-08 61.2 137 36.5
BolC4t24298H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-08 61.2 137 36.5
BcaC02g08765 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.8 60 51.7
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.8 156 31.4
BolC3t17676H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-07 60.8 65 47.7
BolC5t33765H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-07 60.8 49 59.2
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-07 60.5 152 28.3
C02p45780 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-07 60.1 140 34.3
C07p00420 Brassica napus HOM05D004777 ORTHO05D022002 1.9e-07 60.1 75 46.7
BolC6t36836H Brassica oleracea HOM05D000313 ORTHO05D015501 1.9e-07 60.1 97 41.2
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.7 141 29.1
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.7 94 37.2
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.7 153 31.4
BolC2t10639H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-07 59.7 147 34.7
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-07 59.7 152 28.3
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-07 59.7 94 37.2
BolC9t57904H Brassica oleracea HOM05D000313 ORTHO05D021773 2.5e-07 59.7 50 58.0
BraA03t10553Z Brassica rapa HOM05D000313 ORTHO05D000065 2.5e-07 59.7 50 62.0
BcaB02g09369 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.9 77 42.9
BcaB02g11116 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.9 54 57.4
BcaB03g15004 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.9 66 45.5
BcaB06g27821 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.9 49 57.1
BcaB06g28913 Brassica carinata HOM05D000313 ORTHO05D021773 4.3e-07 58.9 50 58.0
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.9 156 28.8
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.9 156 30.1
C02p44290 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.9 89 34.8
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.9 156 28.8
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.9 152 27.6
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 4.3e-07 58.9 142 31.0
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 4.3e-07 58.9 156 28.8
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 4.3e-07 58.9 156 28.8
BraA06t25243Z Brassica rapa HOM05D010357 ORTHO05D000065 4.3e-07 58.9 52 51.9
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-07 58.5 156 30.1
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-07 58.5 151 31.1
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-07 58.5 94 37.2
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 7.3e-07 58.2 146 28.8
BolC3t20605H Brassica oleracea HOM05D004777 ORTHO05D022002 7.3e-07 58.2 75 46.7
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 7.3e-07 58.2 157 28.0
BolC6t35260H Brassica oleracea HOM05D004777 ORTHO05D022002 7.3e-07 58.2 75 45.3
BcaB06g27168 Brassica carinata HOM05D000074 ORTHO05D000065 9.5e-07 57.8 106 33.0
BcaC02g10783 Brassica carinata HOM05D000313 ORTHO05D000065 9.5e-07 57.8 73 46.6
A03p42130 Brassica napus HOM05D000469 ORTHO05D015501 9.5e-07 57.8 98 42.9
A09p42100 Brassica napus HOM05D004777 ORTHO05D022002 9.5e-07 57.8 75 45.3
C01p21020 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-07 57.8 143 28.7
C04p25130 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-07 57.8 73 46.6
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-07 57.8 135 34.1
C07p48230 Brassica napus HOM05D000313 ORTHO05D015501 9.5e-07 57.8 98 42.9
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-07 57.8 139 28.8
BolC4t24017H Brassica oleracea HOM05D000313 ORTHO05D000065 9.5e-07 57.8 73 46.6
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 9.5e-07 57.8 135 34.1
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 9.5e-07 57.8 156 29.5
BraA09t36714Z Brassica rapa HOM05D004777 ORTHO05D022002 9.5e-07 57.8 75 45.3
BcaB01g01069 Brassica carinata HOM05D001045 ORTHO05D001542 1.2e-06 57.4 47 59.6
BcaC01g04836 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-06 57.4 67 50.7
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-06 57.4 156 29.5
A01p22490 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 57.4 139 33.1
BolC2t09079H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 57.4 108 35.2
BolC5t32586H Brassica oleracea HOM05D011859 ORTHO05D016713 1.2e-06 57.4 49 61.2
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 57.4 156 30.8
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.2e-06 57.4 147 30.6
BcaC06g35179 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 60 48.3
BcaC08g44117 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 132 30.3
A01p36390 Brassica napus HOM05D000096 ORTHO05D000045 1.6e-06 57.0 138 31.9
A10p11220 Brassica napus HOM05D010157 ORTHO05D021817 1.6e-06 57.0 34 79.4
C01p05910 Brassica napus HOM05D010157 ORTHO05D021817 1.6e-06 57.0 34 79.4
C05p50150 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 57.0 49 55.1
C07p18920 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 57.0 60 48.3
BcaB01g01233 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-06 56.6 121 33.1
BcaC02g10599 Brassica carinata HOM05D010357 ORTHO05D015494 2.1e-06 56.6 49 57.1
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-06 56.6 140 32.1
BcaC07g39596 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-06 56.6 94 37.2
C04p25640 Brassica napus HOM05D010357 ORTHO05D015494 2.1e-06 56.6 49 57.1
C05p50910 Brassica napus HOM05D010357 ORTHO05D015494 2.1e-06 56.6 49 57.1
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-06 56.6 163 30.7
BolC4t24245H Brassica oleracea HOM05D010357 ORTHO05D015494 2.1e-06 56.6 49 57.1
BraA06t24100Z Brassica rapa HOM05D000313 ORTHO05D000065 2.1e-06 56.6 103 35.0
BcaC04g19952 Brassica carinata HOM05D000313 ORTHO05D016091 2.8e-06 56.2 61 50.8
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-06 56.2 156 28.2
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-06 56.2 49 53.1
BolC1t00606H Brassica oleracea HOM05D000313 ORTHO05D016091 2.8e-06 56.2 61 50.8
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-06 56.2 156 30.1
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-06 55.8 140 31.4
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-06 55.8 155 28.4
BolC2t09566H Brassica oleracea HOM05D004777 ORTHO05D022002 3.6e-06 55.8 75 45.3
BolC5t29849H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-06 55.8 143 32.2
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-06 55.8 155 28.4
BcaB05g22277 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-06 55.5 49 55.1
BcaC08g43190 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-06 55.5 52 51.9
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-06 55.5 162 29.0
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-06 55.5 147 29.3
BraA03t15083Z Brassica rapa HOM05D010157 ORTHO05D021817 4.7e-06 55.5 34 76.5
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 4.7e-06 55.5 159 29.6
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 6.2e-06 55.1 140 31.4
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-06 55.1 144 30.6
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-06 55.1 162 28.4
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-06 54.7 152 32.2
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-06 54.7 152 33.6
A08p07620 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-06 54.7 49 63.3
BolC1t05664H Brassica oleracea HOM05D000313 ORTHO05D000065 8.0e-06 54.7 108 34.3


User provided reference genes

Program Settings