Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p39870 Brassica napus HOM05D040424 ORTHO05D032974 1.6e-140 502.7 248 100.0
BolC5t32731H Brassica oleracea HOM05D040424 ORTHO05D032974 3.6e-127 458.4 263 89.7
BcaC05g27979 Brassica carinata HOM05D040424 ORTHO05D032974 1.8e-70 270.0 216 71.8
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 6.5e-28 128.6 204 46.1
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 3.2e-27 126.3 212 44.8
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 3.2e-27 126.3 212 44.8
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 2.3e-25 120.2 212 44.3
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 2.3e-25 120.2 212 44.3
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 1.4e-19 100.9 220 40.5
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 1.4e-11 74.3 95 52.6
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 1.2e-10 71.2 91 52.7
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 6.1e-10 68.9 80 55.0
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 1.0e-09 68.2 92 51.1
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 1.0e-09 68.2 92 51.1
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 1.8e-09 67.4 92 51.1
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 4.4e-08 62.8 76 55.3
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 2.8e-07 60.1 85 51.8
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 1.8e-06 57.4 51 60.8
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 2.4e-06 57.0 82 48.8
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 2.4e-06 57.0 82 48.8
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 2.4e-06 57.0 113 38.9
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 3.1e-06 56.6 107 36.4
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 3.1e-06 56.6 58 53.4
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 4.1e-06 56.2 80 47.5
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 4.1e-06 56.2 80 47.5
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 4.1e-06 56.2 80 47.5
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 4.1e-06 56.2 52 57.7
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 5.3e-06 55.8 80 47.5
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 5.3e-06 55.8 80 47.5
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 5.3e-06 55.8 58 51.7


User provided reference genes

Program Settings