Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 9.7e-104 380.2 196 100.0
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 7.8e-77 290.8 150 100.0
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 2.5e-67 259.2 168 83.9
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 2.5e-67 259.2 168 83.9
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 3.3e-67 258.8 168 83.3
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.1e-66 256.1 168 83.3
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 6.8e-65 251.1 156 84.6
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 1.2e-64 250.4 157 84.7
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 9.9e-64 247.3 157 84.1
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 1.1e-57 227.3 163 74.2
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 3.1e-57 225.7 163 73.6
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 3.1e-57 225.7 163 73.6
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 5.8e-56 221.5 162 73.5
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 7.6e-56 221.1 168 72.0
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 6.4e-55 218.0 168 71.4
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 3.2e-54 215.7 162 71.6
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 2.1e-50 203.0 165 67.9
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.1e-49 200.7 162 67.9
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 4.9e-47 191.8 135 78.5
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 5.1e-44 181.8 161 62.1
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 3.4e-40 169.1 120 70.8
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 3.4e-40 169.1 165 60.6
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 3.8e-39 165.6 165 59.4
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 1.9e-38 163.3 127 71.7
BcaC05g27972 Brassica carinata HOM05D007694 ORTHO05D039545 1.3e-31 140.6 69 98.6
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 1.7e-31 140.2 166 51.8
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 2.2e-31 139.8 165 52.1
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 2.2e-31 139.8 165 52.1
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 4.2e-30 135.6 163 51.5
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 9.3e-30 134.4 166 50.0
C05p39740 Brassica napus HOM05D007694 ORTHO05D039545 2.1e-29 133.3 77 88.3
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 3.0e-28 129.4 163 50.9
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 5.1e-28 128.6 168 49.4
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 2.5e-27 126.3 166 48.8
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 4.8e-26 122.1 166 48.2
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 4.8e-26 122.1 166 48.2
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 1.1e-25 120.9 148 52.7
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 1.4e-25 120.6 148 52.7
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 8.4e-23 111.3 165 46.7
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 1.2e-21 107.5 143 47.6
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 4.6e-21 105.5 87 67.8
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 5.1e-20 102.1 86 66.3
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 5.1e-20 102.1 68 73.5
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 9.0e-17 91.3 72 65.3
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 2.2e-15 86.7 95 55.8
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 2.2e-15 86.7 130 45.4
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 6.5e-15 85.1 171 36.8
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 8.5e-15 84.7 171 36.8
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 1.9e-14 83.6 171 38.0
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 5.5e-14 82.0 170 36.5
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 7.4e-11 71.6 72 55.6
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 1.7e-10 70.5 116 43.1
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 2.2e-10 70.1 138 39.9
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 3.7e-10 69.3 154 35.7
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 4.8e-10 68.9 155 37.4
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 6.3e-10 68.6 164 34.8
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 8.2e-10 68.2 165 33.9
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 8.2e-10 68.2 82 51.2
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 8.2e-10 68.2 82 51.2
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 8.2e-10 68.2 82 51.2
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 1.1e-09 67.8 76 48.7
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 1.4e-09 67.4 153 35.9
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 1.4e-09 67.4 130 38.5
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 1.4e-09 67.4 155 36.8
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 1.4e-09 67.4 130 38.5
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 2.4e-09 66.6 68 52.9
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 2.4e-09 66.6 82 51.2
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 3.1e-09 66.2 146 37.0
BcaC04g22727 Brassica carinata HOM05D009681 ORTHO05D013235 3.1e-09 66.2 171 32.7
BcaNung03237 Brassica carinata HOM05D007694 ORTHO05D092031 4.1e-09 65.9 58 67.2
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 5.3e-09 65.5 157 33.8
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 6.9e-09 65.1 82 50.0
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 1.2e-08 64.3 104 44.2
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 1.2e-08 64.3 69 53.6
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 1.5e-08 63.9 68 54.4
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 1.5e-08 63.9 68 54.4
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 3.4e-08 62.8 75 49.3
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 4.5e-08 62.4 100 47.0
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 4.5e-08 62.4 69 53.6
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 4.5e-08 62.4 176 34.7
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 4.5e-08 62.4 69 53.6
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 5.9e-08 62.0 124 39.5
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 7.7e-08 61.6 74 50.0
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 7.7e-08 61.6 51 62.7
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 7.7e-08 61.6 51 62.7
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 1.0e-07 61.2 68 52.9
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 1.7e-07 60.5 124 38.7
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 2.2e-07 60.1 68 52.9
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 5.0e-07 58.9 67 50.7
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 1.4e-06 57.4 58 51.7
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 7.2e-06 55.1 47 63.8
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 7.2e-06 55.1 47 63.8
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 9.4e-06 54.7 163 30.7


User provided reference genes

Program Settings