Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27950 Brassica carinata HOM05D004185 ORTHO05D005294 2.3e-151 538.9 280 100.0
C05p39540 Brassica napus HOM05D004185 ORTHO05D005294 2.3e-151 538.9 280 100.0
BolC5t32695H Brassica oleracea HOM05D004185 ORTHO05D005294 2.3e-151 538.9 280 100.0
A05p25460 Brassica napus HOM05D004185 ORTHO05D005294 1.0e-146 523.5 281 97.2
BraA05t21430Z Brassica rapa HOM05D004185 ORTHO05D005294 2.3e-143 512.3 283 95.4
BcaB03g13785 Brassica carinata HOM05D004185 ORTHO05D005294 8.3e-141 503.8 282 93.6
BcaB07g32843 Brassica carinata HOM05D004185 ORTHO05D005294 1.1e-135 486.9 281 90.0
Sp1g27580 Schrenkiella parvula HOM05D004185 ORTHO05D005294 2.4e-135 485.7 283 89.4
Thhalv10008417m.g Eutrema salsugineum HOM05D004185 ORTHO05D005294 5.2e-135 484.6 283 89.0
CARHR031200 Cardamine hirsuta HOM05D004185 ORTHO05D005294 1.2e-134 483.4 283 88.0
AL1G45960 Arabidopsis lyrata HOM05D004185 ORTHO05D005294 2.4e-132 475.7 283 87.6
A09p34390 Brassica napus HOM05D004185 ORTHO05D005294 9.2e-132 473.8 283 86.9
BraA09t38984Z Brassica rapa HOM05D004185 ORTHO05D005294 9.2e-132 473.8 283 86.9
Aa31LG2G14180 Aethionema arabicum HOM05D004185 ORTHO05D005294 3.9e-130 468.4 283 85.5
AT1G31860 Arabidopsis thaliana HOM05D004185 ORTHO05D005294 3.9e-130 468.4 283 87.3
BcaC05g27215 Brassica carinata HOM05D004185 ORTHO05D005294 8.4e-125 450.7 289 82.4
BolC5t31845H Brassica oleracea HOM05D004185 ORTHO05D005294 8.4e-125 450.7 289 82.4
THA.LOC104812726 Tarenaya hassleriana HOM05D004185 ORTHO05D005294 1.3e-122 443.4 282 81.2
C05p31190 Brassica napus HOM05D004185 ORTHO05D005294 1.3e-101 373.6 284 71.8
Atru.chr3.2840 Acer truncatum HOM05D004185 ORTHO05D005294 1.7e-101 373.2 281 68.7
Carub.0001s3019 Capsella rubella HOM05D004185 ORTHO05D005294 7.9e-99 364.4 202 91.6
RcHm_v2.0_Chr7g0223141 Rosa chinensis HOM05D004185 ORTHO05D005294 7.9e-99 364.4 252 72.6
Prupe.6G095300 Prunus persica HOM05D004185 ORTHO05D005294 3.0e-98 362.5 252 72.6
arahy.Tifrunner.gnm1.ann1.DC6XCB Arachis hypogaea HOM05D004185 ORTHO05D005294 6.7e-98 361.3 284 69.0
arahy.Tifrunner.gnm1.ann1.J4TN1Z Arachis hypogaea HOM05D004185 ORTHO05D005294 6.7e-98 361.3 284 69.0
Ciclev10005565m.g Citrus clementina HOM05D004185 ORTHO05D005294 8.7e-98 360.9 279 69.2
Sabra16G0256800 Salix brachista HOM05D004185 ORTHO05D005294 1.1e-97 360.5 287 64.8
CANSAT80G1231 Cannabis sativa HOM05D004185 ORTHO05D005294 1.5e-97 360.1 285 68.8
HanXRQChr03g0070171 Helianthus annuus HOM05D004185 ORTHO05D005294 1.5e-97 360.1 238 75.6
Potri.001G391400 Populus trichocarpa HOM05D004185 ORTHO05D005294 1.5e-97 360.1 285 66.3
FAN05G5133 Fragaria x ananassa HOM05D004185 ORTHO05D005294 2.5e-97 359.4 274 68.6
PGSC0003DMG402004569 Solanum tuberosum HOM05D004185 ORTHO05D005294 2.5e-97 359.4 290 66.6
Gorai.002G196300 Gossypium raimondii HOM05D004185 ORTHO05D005294 5.7e-97 358.2 272 68.8
Manes.11G075000 Manihot esculenta HOM05D004185 ORTHO05D005294 7.4e-97 357.8 286 64.7
Duzib084G1135 Durio zibethinus HOM05D004185 ORTHO05D005294 9.7e-97 357.5 284 67.6
Gohir.A09G051200 Gossypium hirsutum HOM05D004185 ORTHO05D005294 9.7e-97 357.5 272 68.8
Thecc.04G049500 Theobroma cacao HOM05D004185 ORTHO05D005294 1.3e-96 357.1 270 69.3
VMungo0464G1671 Vigna mungo HOM05D004185 ORTHO05D005294 1.3e-96 357.1 281 68.7
Migut.D01934 Erythranthe guttata HOM05D004185 ORTHO05D005294 1.6e-96 356.7 269 68.0
FvH4_3g33130 Fragaria vesca HOM05D004185 ORTHO05D005294 1.6e-96 356.7 231 77.5
PGR142G0491 Punica granatum HOM05D004185 ORTHO05D005294 1.6e-96 356.7 251 72.5
CAN.G767.4 Capsicum annuum HOM05D004185 ORTHO05D005294 3.7e-96 355.5 236 76.3
Ca_08226_v3 Cicer arietinum L. HOM05D004185 ORTHO05D005294 3.7e-96 355.5 285 67.4
FAN14G0322 Fragaria x ananassa HOM05D004185 ORTHO05D005294 3.7e-96 355.5 257 70.8
Lalb_Chr02g0153581 Lupinus albus HOM05D004185 ORTHO05D005294 4.8e-96 355.1 278 66.5
Psat3g092000 Pisum sativum HOM05D004185 ORTHO05D005294 4.8e-96 355.1 230 77.0
Gohir.D01G158300 Gossypium hirsutum HOM05D004185 ORTHO05D005294 6.3e-96 354.8 272 67.6
Lj1g0009190 Lotus japonicus HOM05D004185 ORTHO05D005294 6.3e-96 354.8 287 67.2
MD11G1131000 Malus domestica HOM05D004185 ORTHO05D005294 8.2e-96 354.4 239 73.2
HanXRQChr05g0146191 Helianthus annuus HOM05D004185 ORTHO05D005294 1.1e-95 354.0 234 73.9
vmacro18393 Vaccinium macrocarpon HOM05D004185 ORTHO05D005294 1.1e-95 354.0 266 69.5
TPR.G26467 Trifolium pratense HOM05D004185 ORTHO05D005294 1.4e-95 353.6 230 76.5
GSVIVG01032967001 Vitis vinifera HOM05D004185 ORTHO05D005294 1.4e-95 353.6 286 66.4
FAN21G3167 Fragaria x ananassa HOM05D004185 ORTHO05D005294 1.8e-95 353.2 231 76.6
Eucgr.F01985 Eucalyptus grandis HOM05D004185 ORTHO05D005294 2.4e-95 352.8 256 68.8
ECA232G0163 Erigeron canadensis HOM05D004185 ORTHO05D005294 4.1e-95 352.1 234 73.9
FAN16G0073 Fragaria x ananassa HOM05D004185 ORTHO05D005294 4.1e-95 352.1 228 77.6
Rhsim01G0198500 Rhododendron simsii HOM05D004185 ORTHO05D005294 4.1e-95 352.1 237 74.3
Sopen10g001890 Solanum pennellii HOM05D004185 ORTHO05D005294 4.1e-95 352.1 290 64.8
TWI63G0858 Tripterygium wilfordii HOM05D004185 ORTHO05D005294 4.1e-95 352.1 247 72.5
Solyc10g005930.2 Solanum lycopersicum HOM05D004185 ORTHO05D005294 1.2e-94 350.5 290 64.8
Lj2g0021694 Lotus japonicus HOM05D004185 ORTHO05D005294 2.6e-94 349.4 230 75.7
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 3.4e-94 349.0 255 69.8
Oeu023432.1 Olea europaea HOM05D004185 ORTHO05D005294 3.4e-94 349.0 270 68.9
PSO017G0731 Papaver somniferum HOM05D004185 ORTHO05D005294 3.4e-94 349.0 254 71.3
Medtr7g084480 Medicago truncatula HOM05D004185 ORTHO05D005294 5.9e-94 348.2 229 76.4
Sc07g0003880 Simmondsia chinensis HOM05D004185 ORTHO05D005294 5.9e-94 348.2 280 66.8
Rhsim08G0038300 Rhododendron simsii HOM05D004185 ORTHO05D005294 7.7e-94 347.8 237 73.8
SGA_v2.0_scaffold114G31833 Striga asiatica HOM05D004185 ORTHO05D005294 7.7e-94 347.8 280 66.8
Glyma.16G046900 Glycine max HOM05D004185 ORTHO05D005294 1.3e-93 347.1 279 67.0
CiPaw.07G054200 Carya illinoinensis HOM05D004185 ORTHO05D005294 1.7e-93 346.7 251 70.9
Lj1A1083G27 Lonicera japonica HOM05D004185 ORTHO05D005294 1.7e-93 346.7 245 71.4
Cfa007152 Carpinus fangiana HOM05D004185 ORTHO05D005294 2.2e-93 346.3 289 63.7
Hma1.2p1_0565F.1_g179520 Hydrangea macrophylla HOM05D004185 ORTHO05D005294 2.9e-93 345.9 233 74.7
Lsat_1_v5_gn_9_110520 Lactuca sativa HOM05D004185 ORTHO05D005294 2.9e-93 345.9 240 73.3
PSO478G4545 Papaver somniferum HOM05D004185 ORTHO05D005294 2.9e-93 345.9 254 70.9
QL08p064476 Quercus lobata HOM05D004185 ORTHO05D005294 5.0e-93 345.1 229 74.2
Haze_14968 Corylus avellana HOM05D004185 ORTHO05D005294 6.5e-93 344.7 289 63.7
Actinidia37713 Actinidia chinensis HOM05D004185 ORTHO05D005294 1.1e-92 344.0 237 71.3
Actinidia19546 Actinidia chinensis HOM05D004185 ORTHO05D005294 2.5e-92 342.8 260 66.5
MBI07_g13955_MAGBIO Magnolia biondii HOM05D004185 ORTHO05D005294 2.5e-92 342.8 233 74.7
MD03G1104500 Malus domestica HOM05D004185 ORTHO05D005294 5.5e-92 341.7 231 73.2
Atru.chr11.1029 Acer truncatum HOM05D004185 ORTHO05D005294 9.4e-92 340.9 260 68.1
Cpa.g.sc139.45 Carica papaya HOM05D004185 ORTHO05D005294 2.1e-91 339.7 230 73.5
DCAR_009570 Daucus carota HOM05D004185 ORTHO05D005294 2.1e-91 339.7 268 67.2
AUR62008433 Chenopodium quinoa HOM05D004185 ORTHO05D005294 2.7e-91 339.3 234 72.2
AUR62021660 Chenopodium quinoa HOM05D004185 ORTHO05D005294 2.7e-91 339.3 234 71.8
ATR0602G180 Amborella trichopoda HOM05D004185 ORTHO05D005294 1.0e-90 337.4 257 67.3
Aqoxy6G01376 Aquilegia oxysepala HOM05D004185 ORTHO05D005294 1.0e-90 337.4 229 72.5
TAR374G1058 Trochodendron aralioides HOM05D004185 ORTHO05D005294 1.4e-90 337.0 276 64.5
TAR622G0010 Trochodendron aralioides HOM05D004185 ORTHO05D005294 1.8e-90 336.7 229 72.5
Peaxi162Scf00060g00441 Petunia axillaris HOM05D004185 ORTHO05D005294 3.9e-90 335.5 218 76.6
SalBow2G1694 Salvia bowleyana HOM05D004185 ORTHO05D005294 1.1e-89 334.0 224 75.0
Nn1g02944 Nelumbo nucifera HOM05D004185 ORTHO05D005294 2.0e-89 333.2 230 73.0
MSTRG.11461 Avicennia marina HOM05D004185 ORTHO05D005294 3.3e-89 332.4 224 75.9
EL10Ac5g11038 Beta vulgaris HOM05D004185 ORTHO05D005294 5.7e-89 331.6 272 63.2
Zm00001eb332710 Zea mays HOM05D004185 ORTHO05D005294 9.7e-89 330.9 276 63.8
FAN25G2535 Fragaria x ananassa HOM05D004185 ORTHO05D005294 4.8e-88 328.6 231 72.7
unitig_0.g1440 Utricularia gibba HOM05D004185 ORTHO05D005294 8.2e-88 327.8 235 73.6
CDE09G0075 Ceratophyllum demersum HOM05D004185 ORTHO05D005294 1.8e-87 326.6 232 70.7
ClCG01G007890 Citrullus lanatus HOM05D004185 ORTHO05D005294 9.1e-87 324.3 270 61.5
Os01g0276500 Oryza sativa ssp. japonica HOM05D004185 ORTHO05D005294 9.1e-87 324.3 236 68.6
CsaV3_5G025000 Cucumis sativus L. HOM05D004185 ORTHO05D005294 2.0e-86 323.2 255 63.9
Gorai.006G057300 Gossypium raimondii HOM05D004185 ORTHO05D005294 2.6e-86 322.8 285 62.8
MELO3C005094.2 Cucumis melo HOM05D004185 ORTHO05D005294 5.0e-85 318.5 253 64.0
Nitab4.5_0002655g0020 Nicotiana tabacum HOM05D004185 ORTHO05D005294 4.2e-84 315.5 231 71.0
SMO119G0194 Selaginella moellendorffii HOM05D004185 ORTHO05D005294 2.1e-83 313.2 273 60.4
Nitab4.5_0000426g0080 Nicotiana tabacum HOM05D004185 ORTHO05D005294 4.7e-83 312.0 230 70.4
Mapoly0010s0125 Marchantia polymorpha HOM05D004185 ORTHO05D005294 2.0e-81 306.6 230 69.1
SHI18823 Sapria himalayana HOM05D004185 ORTHO05D005294 3.3e-81 305.8 252 63.1
SEGI_19426 Sequoiadendron giganteum HOM05D004185 ORTHO05D005294 5.7e-81 305.1 231 66.2
RcHm_v2.0_Chr5g0060441 Rosa chinensis HOM05D004185 ORTHO05D005294 7.4e-81 304.7 199 75.4
Phvul.001G082700 Phaseolus vulgaris HOM05D004185 ORTHO05D005294 2.8e-80 302.8 199 78.4
CDE02G0170 Ceratophyllum demersum HOM05D004185 ORTHO05D005294 7.0e-79 298.1 215 68.4
AagrBONN_evm.TU.Sc2ySwM_228.4587 Anthoceros agrestis HOM05D004185 ORTHO05D005294 1.2e-78 297.4 232 66.8
Pp3c19_11880 Physcomitrium patens HOM05D004185 ORTHO05D005294 3.5e-78 295.8 230 66.1
Sed0024479 Sechium edule HOM05D004185 ORTHO05D005294 3.8e-77 292.4 200 71.5
arahy.Tifrunner.gnm1.ann1.75SEPN Arachis hypogaea HOM05D004185 ORTHO05D005294 5.0e-77 292.0 283 60.8
Hund11935 Selenicereus undatus HOM05D004185 ORTHO05D005294 6.1e-75 285.0 199 71.9
Cc02_g08450 Coffea canephora HOM05D004185 ORTHO05D005294 1.4e-74 283.9 199 73.4
HPP92_023021 Vanilla planifolia HOM05D004185 ORTHO05D005294 5.2e-74 282.0 200 71.0
CSS0049496 Camellia sinensis var. sinensis HOM05D004185 ORTHO05D005294 2.6e-73 279.6 191 74.3
CBR_g41148 Chara braunii HOM05D004185 ORTHO05D005294 3.3e-73 279.3 239 62.8
Gohir.D09G052300 Gossypium hirsutum HOM05D004185 ORTHO05D005294 4.4e-73 278.9 200 71.0
MD03G1104300 Malus domestica HOM05D004185 ORTHO05D005294 8.2e-72 274.6 228 63.6
FAN02G1839 Fragaria x ananassa HOM05D004185 ORTHO05D005294 1.4e-71 273.9 216 65.3
FvH4_6g09080 Fragaria vesca HOM05D004185 ORTHO05D005294 1.6e-70 270.4 187 71.1
MCO14G189 Micromonas commoda HOM05D004185 ORTHO05D005294 5.0e-69 265.4 238 58.4
Haze_15442 Corylus avellana HOM05D004185 ORTHO05D005294 3.2e-68 262.7 226 61.1
CBR_g45683 Chara braunii HOM05D004185 ORTHO05D005294 1.6e-67 260.4 235 59.6
MBI07_g07565_MAGBIO Magnolia biondii HOM05D004185 ORTHO05D005294 1.2e-62 244.2 167 73.1
Cre13.g576650 Chlamydomonas reinhardtii HOM05D004185 ORTHO05D005294 1.3e-61 240.7 238 53.8
PRCOL_00000818 Prasinoderma coloniale HOM05D004185 ORTHO05D005294 1.7e-61 240.4 231 55.8
CSS0023313 Camellia sinensis var. sinensis HOM05D004185 ORTHO05D005294 1.2e-59 234.2 185 67.6
Gorai.008G088200 Gossypium raimondii HOM05D004185 ORTHO05D005294 2.7e-59 233.0 285 49.8
CSS0015772 Camellia sinensis var. sinensis HOM05D004185 ORTHO05D005294 1.4e-55 220.7 192 60.9
QL02p069093 Quercus lobata HOM05D004185 ORTHO05D005294 2.9e-48 196.4 146 65.8
Nn7g37500 Nelumbo nucifera HOM05D004185 ORTHO05D005294 8.3e-48 194.9 161 62.7
Cc00_g25400 Coffea canephora HOM05D004185 ORTHO05D005294 7.8e-46 188.3 156 62.8
Dinv33271 Davidia involucrata HOM05D004185 ORTHO05D005294 8.0e-43 178.3 173 54.3
Gorai.007G236100 Gossypium raimondii HOM05D004185 ORTHO05D005294 5.8e-41 172.2 131 67.2
Gohir.D11G219700 Gossypium hirsutum HOM05D004185 ORTHO05D005294 1.1e-39 167.9 131 67.2
Gohir.1Z049452 Gossypium hirsutum HOM05D004185 ORTHO05D005294 1.3e-37 161.0 132 64.4
Gohir.1Z049352 Gossypium hirsutum HOM05D004185 ORTHO05D005294 5.6e-36 155.6 102 75.5
Gohir.D12G080201 Gossypium hirsutum HOM05D004185 ORTHO05D005294 5.6e-36 155.6 102 75.5
vmacro12996 Vaccinium macrocarpon HOM05D004185 ORTHO05D005294 2.8e-35 153.3 158 55.1
CDE01G0632 Ceratophyllum demersum HOM05D004185 ORTHO05D005294 1.1e-31 141.4 115 66.1
Prupe.6G096900 Prunus persica HOM05D004185 ORTHO05D005294 7.1e-31 138.7 123 58.5
Gohir.D11G259201 Gossypium hirsutum HOM05D002015 ORTHO05D016007 5.6e-28 129.0 74 85.1
MD03G1104400 Malus domestica HOM05D004185 ORTHO05D005294 1.6e-27 127.5 157 46.5
Gohir.D01G143966 Gossypium hirsutum HOM05D002015 ORTHO05D016007 2.1e-27 127.1 74 83.8
Gohir.D02G127900 Gossypium hirsutum HOM05D002015 ORTHO05D016007 2.8e-27 126.7 74 83.8
Gorai.002G177700 Gossypium raimondii HOM05D002015 ORTHO05D016007 3.6e-27 126.3 74 83.8
Gohir.D04G064100 Gossypium hirsutum HOM05D002015 ORTHO05D016007 1.4e-26 124.4 74 81.1
Ca_29370_v3 Cicer arietinum L. HOM05D004185 ORTHO05D005294 1.5e-25 120.9 203 36.5
Nn7g37501 Nelumbo nucifera HOM05D004185 ORTHO05D005294 1.6e-19 100.9 70 71.4
QL02p069129 Quercus lobata HOM05D004185 ORTHO05D005294 5.2e-18 95.9 64 73.4
arahy.Tifrunner.gnm1.ann1.R9VNWC Arachis hypogaea HOM05D004185 ORTHO05D085194 2.6e-17 93.6 90 55.6
QL02p068903 Quercus lobata HOM05D004185 ORTHO05D005294 1.4e-15 87.8 63 71.4
SMO179G0001 Selaginella moellendorffii HOM05D004185 ORTHO05D005294 3.2e-15 86.7 66 66.7
QL02p069147 Quercus lobata HOM05D004185 ORTHO05D005294 1.2e-14 84.7 66 65.2
Gorai.005G143700 Gossypium raimondii HOM05D004185 ORTHO05D016007 1.5e-12 77.8 44 84.1
Glyma.11G241900 Glycine max HOM05D004185 ORTHO05D005294 3.3e-12 76.6 64 64.1
Gohir.D13G151200 Gossypium hirsutum HOM05D004185 ORTHO05D016007 1.6e-11 74.3 44 77.3
QL02p069014 Quercus lobata HOM05D004185 ORTHO05D005294 2.8e-11 73.6 46 80.4
A09p34420 Brassica napus HOM05D004185 ORTHO05D040565 2.0e-09 67.4 37 78.4
BraA09t38986Z Brassica rapa HOM05D004185 ORTHO05D040565 2.0e-09 67.4 37 78.4
DCAR_020016 Daucus carota HOM05D004185 ORTHO05D005294 2.0e-09 67.4 65 55.4
SMO119G0521 Selaginella moellendorffii HOM05D004185 ORTHO05D005294 5.8e-09 65.9 66 53.0
Cfa023091 Carpinus fangiana HOM05D004109 ORTHO05D005867 2.2e-08 63.9 254 24.8
RcHm_v2.0_Chr5g0060451 Rosa chinensis HOM05D004185 ORTHO05D005294 7.9e-06 55.5 60 50.0


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