Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p39470 Brassica napus HOM05D035006 ORTHO05D027999 4.4e-32 140.6 66 100.0
BraA05t21425Z Brassica rapa HOM05D035006 ORTHO05D027999 2.3e-20 101.7 53 88.7
A05p25380 Brassica napus HOM05D000379 ORTHO05D000254 2.1e-18 95.1 53 83.0
BraA05t21423Z Brassica rapa HOM05D000379 ORTHO05D000254 2.1e-18 95.1 53 83.0
A05p25400 Brassica napus HOM05D035006 ORTHO05D027999 1.0e-17 92.8 64 73.4
BcaC05g27942 Brassica carinata HOM05D000379 ORTHO05D000254 2.0e-16 88.6 55 78.2
C05p39450 Brassica napus HOM05D000379 ORTHO05D000254 2.0e-16 88.6 55 78.2
AT1G31885 Arabidopsis thaliana HOM05D000379 ORTHO05D000254 3.7e-15 84.3 53 73.6
Thhalv10008205m.g Eutrema salsugineum HOM05D000379 ORTHO05D000254 6.3e-15 83.6 53 73.6
CARHR031240 Cardamine hirsuta HOM05D000379 ORTHO05D000254 1.8e-14 82.0 53 71.7
AL1G45990 Arabidopsis lyrata HOM05D000379 ORTHO05D000254 5.4e-14 80.5 53 69.8
BcaC05g27941 Brassica carinata HOM05D000379 ORTHO05D000254 9.2e-14 79.7 53 71.7
C05p39440 Brassica napus HOM05D000379 ORTHO05D000254 9.2e-14 79.7 53 71.7
BcaB04g18005 Brassica carinata HOM05D000379 ORTHO05D000254 1.0e-12 76.3 51 70.6
A05p25370 Brassica napus HOM05D000379 ORTHO05D000254 1.3e-12 75.9 53 67.9
A08p09430 Brassica napus HOM05D000379 ORTHO05D000254 1.3e-12 75.9 51 68.6
BraA05t21422Z Brassica rapa HOM05D000379 ORTHO05D000254 1.3e-12 75.9 53 67.9
BraA08t32942Z Brassica rapa HOM05D000379 ORTHO05D027999 1.3e-12 75.9 51 68.6
BolC5t32688H Brassica oleracea HOM05D000379 ORTHO05D000254 1.7e-12 75.5 48 75.0
Carub.0001s3022 Capsella rubella HOM05D000379 ORTHO05D000254 2.3e-12 75.1 55 67.3
BcaC07g37641 Brassica carinata HOM05D000379 ORTHO05D000254 5.0e-12 73.9 51 66.7
BolC8t48014H Brassica oleracea HOM05D000379 ORTHO05D000254 5.0e-12 73.9 51 66.7
Sp1g27620 Schrenkiella parvula HOM05D000379 ORTHO05D000254 5.0e-12 73.9 50 66.0
Aa31LG2G14150 Aethionema arabicum HOM05D000379 ORTHO05D000254 1.9e-11 72.0 53 64.2


User provided reference genes

Program Settings