Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 1.3e-49 199.5 110 100.0
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 1.3e-49 199.5 110 100.0
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 1.2e-47 193.0 110 99.1
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 3.4e-45 184.9 110 94.5
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 4.4e-45 184.5 110 96.4
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 3.7e-44 181.4 110 95.5
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 1.9e-40 169.1 110 87.3
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 5.6e-40 167.5 110 87.3
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 7.3e-40 167.2 112 88.4
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 3.5e-34 148.3 97 88.7
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 4.6e-34 147.9 105 81.9
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 1.3e-33 146.4 97 87.6
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 1.2e-29 133.3 110 70.0
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 2.5e-24 115.5 94 62.8
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 5.6e-24 114.4 110 60.0
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 2.1e-23 112.5 99 60.6
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 6.2e-23 110.9 98 65.3
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 1.1e-22 110.2 99 59.6
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 1.4e-22 109.8 94 60.6
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 1.4e-22 109.8 86 65.1
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 4.0e-22 108.2 99 58.6
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 4.0e-22 108.2 99 58.6
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 4.0e-22 108.2 99 58.6
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 4.0e-22 108.2 105 56.2
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 6.8e-22 107.5 94 57.4
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 6.8e-22 107.5 86 67.4
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 8.9e-22 107.1 99 57.6
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 8.9e-22 107.1 91 62.6
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 1.5e-21 106.3 94 60.6
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.6e-21 105.5 99 57.6
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.6e-21 105.5 99 57.6
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 4.4e-21 104.8 89 60.7
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 7.6e-21 104.0 98 57.1
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 7.6e-21 104.0 94 56.4
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 9.9e-21 103.6 107 55.1
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 1.7e-20 102.8 101 58.4
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 2.2e-20 102.4 94 57.4
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.2e-20 102.4 99 56.6
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 2.2e-20 102.4 105 61.0
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 3.8e-20 101.7 100 54.0
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 3.8e-20 101.7 97 55.7
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 4.9e-20 101.3 83 62.7
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 4.9e-20 101.3 83 61.4
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 4.9e-20 101.3 83 61.4
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 4.9e-20 101.3 83 61.4
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 6.4e-20 100.9 97 57.7
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 6.4e-20 100.9 83 61.4
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 8.4e-20 100.5 114 59.6
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 8.4e-20 100.5 99 55.6
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 1.1e-19 100.1 92 58.7
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 1.4e-19 99.8 109 53.2
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 1.4e-19 99.8 83 60.2
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 1.4e-19 99.8 90 71.1
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 2.4e-19 99.0 83 60.2
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 3.2e-19 98.6 85 61.2
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 3.2e-19 98.6 83 59.0
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 3.2e-19 98.6 82 61.0
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 3.2e-19 98.6 92 57.6
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 4.1e-19 98.2 95 65.3
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 5.4e-19 97.8 83 60.2
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 7.1e-19 97.4 96 53.1
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 9.2e-19 97.1 101 52.5
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 2.1e-18 95.9 87 66.7
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 2.1e-18 95.9 83 59.0
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 3.5e-18 95.1 97 59.8
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 4.6e-18 94.7 102 54.9
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 6.0e-18 94.4 86 66.3
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 7.8e-18 94.0 86 57.0
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 1.0e-17 93.6 97 58.8
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 1.3e-17 93.2 87 55.2
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 2.3e-17 92.4 82 61.0
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 2.3e-17 92.4 102 56.9
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 3.0e-17 92.0 135 42.2
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 6.6e-17 90.9 103 60.2
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 1.1e-16 90.1 123 43.9
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 1.5e-16 89.7 89 62.9
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 1.5e-16 89.7 89 62.9
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 1.5e-16 89.7 93 49.5
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 1.5e-16 89.7 96 50.0
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 1.9e-16 89.4 99 49.5
CARHR033090 Cardamine hirsuta HOM05D007450 ORTHO05D009377 6.2e-15 84.3 59 74.6
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 1.4e-14 83.2 90 61.1
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 1.8e-14 82.8 86 54.7
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 2.4e-14 82.4 97 58.8
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 9.0e-14 80.5 74 55.4
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 1.2e-13 80.1 53 69.8
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 1.5e-13 79.7 103 46.6
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 1.5e-13 79.7 86 58.1
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 2.9e-12 75.5 47 72.3
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 3.8e-12 75.1 99 44.4
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 4.9e-12 74.7 87 50.6
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 1.1e-11 73.6 99 43.4
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 3.2e-11 72.0 69 53.6
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 5.4e-11 71.2 56 58.9
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 2.7e-10 68.9 60 58.3
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 6.6e-09 64.3 55 52.7
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 1.5e-08 63.2 45 64.4
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 1.9e-08 62.8 94 40.4
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 2.8e-07 58.9 43 60.5
Aa31LG7G15400 Aethionema arabicum HOM05D006096 ORTHO05D009377 8.1e-07 57.4 44 61.4
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 1.4e-06 56.6 39 61.5


User provided reference genes

Program Settings