Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p38710 Brassica napus HOM05D030699 ORTHO05D021591 3.3e-59 231.5 116 100.0
C01p36480 Brassica napus HOM05D030699 ORTHO05D021591 2.1e-58 228.8 116 99.1
C08p18580 Brassica napus HOM05D030699 ORTHO05D021591 2.8e-58 228.4 116 98.3
BolC5t32610H Brassica oleracea HOM05D030699 ORTHO05D021591 2.4e-49 198.7 100 100.0
BcaC09g49251 Brassica carinata HOM05D001086 ORTHO05D009904 3.8e-15 85.1 115 47.8
Aa31LG7G11710 Aethionema arabicum HOM05D001086 ORTHO05D009904 5.5e-14 81.3 68 55.9
Aa31sc688G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 8.0e-13 77.4 98 45.9
Aa31sc465G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.0e-12 77.0 87 46.0
Aa31sc555G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.0e-12 77.0 81 49.4
BcaB02g11280 Brassica carinata HOM05D008266 ORTHO05D000062 1.0e-12 77.0 118 39.8
Aa31sc639G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.8e-12 76.3 57 63.2
Aa31LG8G12280 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.0e-12 75.5 98 44.9
AL1G48130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.2e-12 74.7 110 38.2
BcaC08g44714 Brassica carinata HOM05D008266 ORTHO05D021591 6.8e-12 74.3 99 38.4
BolC4t22507H Brassica oleracea HOM05D001086 ORTHO05D009904 1.5e-11 73.2 116 44.0
Aa31sc360G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.6e-11 72.4 98 44.9
Aa31LG2G17950 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.4e-11 72.0 98 43.9
Aa31sc21G160 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.4e-11 72.0 103 42.7
BcaC03g18089 Brassica carinata HOM05D008266 ORTHO05D000062 9.8e-11 70.5 99 36.4
BcaC06g34574 Brassica carinata HOM05D008266 ORTHO05D000062 9.8e-11 70.5 99 36.4
Aa31sc259G20 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.3e-10 70.1 98 44.9
Aa31sc135G30 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.7e-10 69.7 109 39.4
BraA08t32231Z Brassica rapa HOM05D001086 ORTHO05D001112 2.2e-10 69.3 109 42.2
Aa31sc77G30 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.7e-10 68.6 47 66.0
BcaB01g02847 Brassica carinata HOM05D008266 ORTHO05D000062 3.7e-10 68.6 109 35.8
Aa31LG1G5710 Aethionema arabicum HOM05D001086 ORTHO05D009904 6.3e-10 67.8 103 41.7
THA.LOC104810147 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 1.8e-09 66.2 115 40.0
Aa31sc1568G20 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.1e-09 65.5 98 41.8
BcaB01g00796 Brassica carinata HOM05D008266 ORTHO05D021591 5.4e-09 64.7 108 35.2
BcaB04g17841 Brassica carinata HOM05D008266 ORTHO05D000062 5.4e-09 64.7 48 64.6
BcaB02g10137 Brassica carinata HOM05D008266 ORTHO05D000062 5.9e-08 61.2 98 36.7
BcaB04g18289 Brassica carinata HOM05D001086 ORTHO05D009904 5.9e-08 61.2 95 43.2
BolC3t20058H Brassica oleracea HOM05D008266 ORTHO05D000062 5.9e-08 61.2 92 35.9
BcaC05g26938 Brassica carinata HOM05D008266 ORTHO05D009904 7.7e-08 60.8 98 36.7
Aa31sc250G50 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.0e-07 60.5 99 38.4
BcaC01g03173 Brassica carinata HOM05D008266 ORTHO05D000062 1.0e-07 60.5 88 35.2
BcaNung02471 Brassica carinata HOM05D008266 ORTHO05D000062 1.0e-07 60.5 102 41.2
BolC2t08050H Brassica oleracea HOM05D008266 ORTHO05D000062 1.0e-07 60.5 108 34.3
BolC8t50117H Brassica oleracea HOM05D001086 ORTHO05D009904 1.0e-07 60.5 105 40.0
BcaB06g26682 Brassica carinata HOM05D008266 ORTHO05D000062 1.3e-07 60.1 95 41.1
BcaC02g11220 Brassica carinata HOM05D001086 ORTHO05D009904 1.3e-07 60.1 95 46.3
BcaB08g35690 Brassica carinata HOM05D001086 ORTHO05D009904 1.7e-07 59.7 93 46.2
BcaC08g47042 Brassica carinata HOM05D008266 ORTHO05D000062 1.7e-07 59.7 115 36.5
BcaC06g36414 Brassica carinata HOM05D008266 ORTHO05D000062 5.0e-07 58.2 47 55.3
BcaC08g43692 Brassica carinata HOM05D001086 ORTHO05D009904 5.0e-07 58.2 93 47.3
C06p15090 Brassica napus HOM05D008266 ORTHO05D000062 5.0e-07 58.2 92 34.8
BolC5t31567H Brassica oleracea HOM05D008266 ORTHO05D000062 5.0e-07 58.2 92 34.8
BolC6t36685H Brassica oleracea HOM05D008266 ORTHO05D000062 5.0e-07 58.2 92 34.8
SpUn1206_0010 Schrenkiella parvula HOM05D008266 ORTHO05D000062 6.6e-07 57.8 123 35.0
BcaB03g16140 Brassica carinata HOM05D008266 ORTHO05D000062 8.6e-07 57.4 112 36.6
BolC2t10248H Brassica oleracea HOM05D008266 ORTHO05D000062 8.6e-07 57.4 117 30.8
BcaB04g17791 Brassica carinata HOM05D001086 ORTHO05D009904 1.1e-06 57.0 93 45.2
BcaC08g44331 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-06 57.0 98 35.7
ECA246G4894 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 92 32.6
THA.LOC104810640 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 2.5e-06 55.8 45 57.8
THA.LOC104815415 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 2.5e-06 55.8 89 40.4
BcaB02g11130 Brassica carinata HOM05D008266 ORTHO05D000062 4.2e-06 55.1 114 31.6
BolC7t42130H Brassica oleracea HOM05D008266 ORTHO05D000062 4.2e-06 55.1 117 33.3
Aa31sc226G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 5.5e-06 54.7 37 70.3
THA.LOC104810224 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 5.5e-06 54.7 44 59.1
BcaC09g48783 Brassica carinata HOM05D008266 ORTHO05D000062 7.2e-06 54.3 117 31.6
BolC1t04557H Brassica oleracea HOM05D008266 ORTHO05D000062 7.2e-06 54.3 117 31.6
BcaNung02439 Brassica carinata HOM05D001086 ORTHO05D009904 9.5e-06 53.9 93 44.1


User provided reference genes

Program Settings