Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p38670 Brassica napus HOM05D002270 ORTHO05D002866 5.4e-84 314.3 160 100.0
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.0e-82 310.1 157 100.0
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 5.9e-75 284.3 162 91.4
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 5.0e-74 281.2 162 90.1
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 2.5e-73 278.9 162 88.9
Sp5g22070 Schrenkiella parvula HOM05D002270 ORTHO05D002866 1.6e-72 276.2 162 85.8
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 4.4e-70 268.1 162 86.4
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 4.9e-69 264.6 163 84.0
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.4e-68 263.1 164 84.8
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 4.3e-65 251.5 163 81.0
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 2.1e-64 249.2 163 80.4
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 8.9e-55 217.2 160 70.0
BcaC03g14803 Brassica carinata HOM05D002270 ORTHO05D002866 3.1e-47 192.2 162 67.9
Cpa.g.sc30.17 Carica papaya HOM05D002270 ORTHO05D002866 1.0e-42 177.2 165 54.5
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.3e-42 176.0 152 57.9
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.7e-37 159.8 155 55.5
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 9.3e-36 154.1 167 52.7
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 2.7e-35 152.5 159 51.6
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 2.7e-35 152.5 164 50.0
COL.COLO4_12569 Corchorus olitorius HOM05D002270 ORTHO05D002866 1.3e-34 150.2 164 49.4
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 3.9e-34 148.7 167 48.5
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 5.1e-34 148.3 165 49.7
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 5.1e-34 148.3 158 51.9
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 9.6e-33 144.1 168 47.0
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.6e-32 143.3 168 48.2
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 2.1e-32 142.9 168 48.2
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 2.8e-32 142.5 164 50.6
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 2.8e-32 142.5 160 48.1
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 3.6e-32 142.1 168 48.2
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 3.6e-32 142.1 169 46.2
QL01p053604 Quercus lobata HOM05D002270 ORTHO05D002866 3.6e-32 142.1 158 50.0
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 4.8e-32 141.7 169 47.3
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 6.2e-32 141.4 159 49.1
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 6.2e-32 141.4 166 47.0
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 8.1e-32 141.0 158 48.7
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 1.4e-31 140.2 167 45.5
arahy.Tifrunner.gnm1.ann1.VXKY2I Arachis hypogaea HOM05D002270 ORTHO05D002866 1.8e-31 139.8 162 47.5
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 2.4e-31 139.4 161 49.1
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 2.4e-31 139.4 157 49.0
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.4e-31 139.4 157 49.0
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.4e-31 139.4 157 49.0
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 3.1e-31 139.0 162 46.9
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 3.1e-31 139.0 161 48.4
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 4.0e-31 138.7 160 47.5
Solyc04g072270.1 Solanum lycopersicum HOM05D002270 ORTHO05D002866 4.0e-31 138.7 168 42.9
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 5.3e-31 138.3 166 47.6
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 6.9e-31 137.9 157 49.7
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 6.9e-31 137.9 169 45.0
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 6.9e-31 137.9 163 47.2
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 9.0e-31 137.5 157 49.0
TAR636G1163 Trochodendron aralioides HOM05D002270 ORTHO05D002866 1.2e-30 137.1 160 46.2
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.5e-30 136.7 160 46.2
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 2.0e-30 136.3 172 45.3
Peaxi162Scf00226g00824 Petunia axillaris HOM05D002270 ORTHO05D002866 2.0e-30 136.3 168 42.9
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 4.5e-30 135.2 165 47.9
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 5.8e-30 134.8 161 45.3
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 9.9e-30 134.0 168 42.3
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.3e-29 133.7 159 45.3
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 1.3e-29 133.7 161 46.6
Lsat_1_v5_gn_7_1981 Lactuca sativa HOM05D002270 ORTHO05D002866 1.3e-29 133.7 169 43.8
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 2.2e-29 132.9 162 47.5
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 3.8e-29 132.1 160 47.5
Lalb_Chr20g0113881 Lupinus albus HOM05D002270 ORTHO05D002866 3.8e-29 132.1 161 44.7
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 3.8e-29 132.1 167 46.7
Nitab4.5_0003025g0030 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.1e-28 130.6 166 43.4
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 1.4e-28 130.2 158 48.1
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 2.4e-28 129.4 167 40.7
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 3.2e-28 129.0 160 45.6
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 4.2e-28 128.6 172 44.2
Nitab4.5_0000433g0190 Nicotiana tabacum HOM05D002270 ORTHO05D002866 4.2e-28 128.6 166 42.8
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 5.4e-28 128.3 159 45.3
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 9.3e-28 127.5 165 44.8
ECA232G4141 Erigeron canadensis HOM05D002270 ORTHO05D002866 2.1e-27 126.3 169 42.6
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 2.1e-27 126.3 162 45.7
TPR.G9777 Trifolium pratense HOM05D002270 ORTHO05D002866 2.7e-27 125.9 159 43.4
TPR.G29953 Trifolium pratense HOM05D002270 ORTHO05D002866 1.0e-26 124.0 160 43.8
QL93p0107_0362 Quercus lobata HOM05D002270 ORTHO05D002866 3.0e-26 122.5 143 49.7
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 5.1e-26 121.7 198 39.9
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 8.7e-26 120.9 160 44.4
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 4.3e-25 118.6 159 41.5
VMungo0464G1016 Vigna mungo HOM05D002270 ORTHO05D002866 7.4e-25 117.9 146 45.2
Hund05751 Selenicereus undatus HOM05D002270 ORTHO05D002866 1.6e-24 116.7 167 43.1
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 6.2e-24 114.8 159 41.5
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 2.4e-23 112.8 163 42.3
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 2.4e-23 112.8 124 50.8
vmacro22219 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 5.3e-23 111.7 123 51.2
Os10g0456950 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 2.6e-22 109.4 162 40.1
Ah.08g216540 Amaranthus hybridus HOM05D002270 ORTHO05D002866 3.4e-22 109.0 171 39.2
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 3.4e-22 109.0 59 88.1
QL01p053642 Quercus lobata HOM05D002270 ORTHO05D002866 1.7e-21 106.7 117 52.1
CDE12G0416 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 8.4e-21 104.4 160 39.4
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 8.4e-21 104.4 205 34.6
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 5.5e-20 101.7 161 35.4
C02p22560 Brassica napus HOM05D002270 ORTHO05D002866 7.1e-20 101.3 118 50.0
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 8.7e-18 94.4 155 40.0
ATR0736G170 Amborella trichopoda HOM05D002270 ORTHO05D002866 2.5e-17 92.8 159 38.4
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 9.6e-17 90.9 168 35.1
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 3.7e-16 89.0 159 38.4
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 6.5e-13 78.2 136 35.3
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 2.7e-11 72.8 95 43.2
SEGI_39038 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 3.5e-11 72.4 153 30.7
BcaC07g41079 Brassica carinata HOM05D002270 ORTHO05D002866 1.9e-09 66.6 39 87.2
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 3.3e-09 65.9 163 31.3
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 1.3e-08 63.9 110 39.1
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.6e-08 63.5 105 41.0
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 2.2e-08 63.2 149 30.9


User provided reference genes

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