Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p38440 Brassica napus HOM05D044546 ORTHO05D042235 3.3e-40 167.9 86 100.0
BolC5t32579H Brassica oleracea HOM05D044546 ORTHO05D042235 3.3e-40 167.9 86 100.0
BcaC05g27846 Brassica carinata HOM05D001357 ORTHO05D001224 5.2e-25 117.5 60 100.0
BcaB03g13724 Brassica carinata HOM05D001357 ORTHO05D001224 2.9e-12 75.1 59 67.8
Carub.0001s3094 Capsella rubella HOM05D001357 ORTHO05D001224 7.2e-11 70.5 59 67.8
AL1G46780 Arabidopsis lyrata HOM05D001357 ORTHO05D001224 1.2e-10 69.7 60 66.7
Thhalv10006944m.g Eutrema salsugineum HOM05D001357 ORTHO05D001224 4.0e-09 64.7 62 61.3
Sp1g28370 Schrenkiella parvula HOM05D001357 ORTHO05D001224 2.0e-08 62.4 59 61.0
THA.LOC104812745 Tarenaya hassleriana HOM05D001357 ORTHO05D001224 1.4e-06 56.2 57 56.1
Aa31LG9G15340 Aethionema arabicum HOM05D001357 ORTHO05D001224 1.8e-06 55.8 56 58.9
AT1G32530 Arabidopsis thaliana HOM05D001357 ORTHO05D001224 2.4e-06 55.5 49 59.2
AL4G31360 Arabidopsis lyrata HOM05D001357 ORTHO05D001224 7.0e-06 53.9 54 59.3
Carub.0004s1702 Capsella rubella HOM05D001357 ORTHO05D001224 7.0e-06 53.9 54 59.3
Sp4g17530 Schrenkiella parvula HOM05D001357 ORTHO05D001224 7.0e-06 53.9 38 73.7


User provided reference genes

Program Settings