Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 6.0e-66 254.2 146 100.0
BolC5t32402H Brassica oleracea HOM05D007693 ORTHO05D002086 1.6e-55 219.5 146 89.7
C05p48940 Brassica napus HOM05D007693 ORTHO05D002086 1.8e-54 216.1 135 94.8
BraA08t34216Z Brassica rapa HOM05D007693 ORTHO05D002086 5.1e-33 144.8 80 87.5
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 3.8e-28 128.6 146 56.2
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 3.8e-28 128.6 146 56.2
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 5.0e-28 128.3 146 49.3
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 6.5e-28 127.9 146 56.2
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 3.6e-26 122.1 146 54.1
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-24 116.7 146 56.8
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 5.3e-22 108.2 132 46.2
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 3.8e-20 102.1 122 43.4
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 5.0e-20 101.7 130 43.8
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 1.1e-19 100.5 94 54.3
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 3.6e-18 95.5 90 53.3
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 1.3e-15 87.0 94 48.9
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-15 85.9 87 52.9
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-15 85.9 87 52.9
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.8e-15 85.9 86 51.2
BolC8t49549H Brassica oleracea HOM05D007693 ORTHO05D002086 8.2e-15 84.3 63 65.1
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 8.2e-15 84.3 104 44.2
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.1e-14 84.0 77 48.1
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-14 83.2 83 53.0
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 2.4e-14 82.8 91 47.3
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 2.4e-14 82.8 83 53.0
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 3.1e-14 82.4 92 44.6
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.1e-14 82.4 73 49.3
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 9.1e-14 80.9 87 50.6
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 9.1e-14 80.9 106 43.4
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.2e-13 80.5 78 52.6
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.2e-13 80.5 78 52.6
BolC9t55840H Brassica oleracea HOM05D007693 ORTHO05D002086 1.2e-13 80.5 64 65.6
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.2e-13 80.5 87 48.3
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.0e-13 79.7 90 47.8
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.0e-13 79.7 90 47.8
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.0e-13 79.7 90 47.8
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.0e-13 79.7 78 50.0
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 3.5e-13 79.0 91 46.2
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.5e-13 78.6 94 44.7
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 5.9e-13 78.2 91 46.2
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 5.9e-13 78.2 94 45.7
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 1.0e-12 77.4 89 48.3
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 1.0e-12 77.4 78 46.2
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-12 77.0 87 49.4
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 3.8e-12 75.5 91 44.0
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 5.0e-12 75.1 79 44.3
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 8.5e-12 74.3 78 46.2
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 8.5e-12 74.3 79 45.6
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-11 73.6 89 46.1
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-11 73.6 89 46.1
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.9e-11 73.2 74 47.3
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 2.5e-11 72.8 82 42.7
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 3.2e-11 72.4 91 42.9
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 3.2e-11 72.4 79 44.3
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 3.2e-11 72.4 79 44.3
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 5.5e-11 71.6 79 45.6
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 5.5e-11 71.6 84 42.9
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 9.4e-11 70.9 77 45.5
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-10 70.5 94 42.6
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 1.2e-10 70.5 75 45.3
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 1.6e-10 70.1 78 46.2
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.7e-10 69.3 80 40.0
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 3.6e-10 68.9 82 41.5
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.6e-10 68.9 76 42.1
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 3.6e-10 68.9 77 41.6
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 4.7e-10 68.6 95 45.3
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 6.1e-10 68.2 76 43.4
BcaC05g28526 Brassica carinata HOM05D000977 ORTHO05D002086 3.0e-09 65.9 91 40.7
BcaB04g17442 Brassica carinata HOM05D007693 ORTHO05D002086 4.0e-09 65.5 77 44.2
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 5.2e-09 65.1 77 40.3
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 8.8e-09 64.3 77 42.9
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 1.2e-08 63.9 76 42.1
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.2e-08 63.9 79 40.5
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 1.5e-08 63.5 75 41.3
THA.LOC104818502 Tarenaya hassleriana HOM05D007693 ORTHO05D002086 1.5e-08 63.5 80 37.5
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 2.6e-08 62.8 96 40.6
Sp6g09820 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.6e-08 62.8 57 49.1
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 4.4e-08 62.0 81 40.7
BcaB06g26026 Brassica carinata HOM05D007693 ORTHO05D002086 9.7e-08 60.8 79 40.5
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 9.7e-08 60.8 94 39.4
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 4.8e-07 58.5 73 45.2
BcaB06g26931 Brassica carinata HOM05D007693 ORTHO05D015462 4.8e-07 58.5 93 36.6
BcaC06g36717 Brassica carinata HOM05D000977 ORTHO05D002086 4.8e-07 58.5 74 41.9
Sp7g03170 Schrenkiella parvula HOM05D018387 ORTHO05D002086 6.3e-07 58.2 85 40.0
C09p60400 Brassica napus HOM05D007693 ORTHO05D002086 1.1e-06 57.4 54 61.1
BraA07t28690Z Brassica rapa HOM05D007462 ORTHO05D002086 1.1e-06 57.4 82 35.4
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 2.4e-06 56.2 74 43.2
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 2.4e-06 56.2 73 42.5
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 2.4e-06 56.2 71 39.4
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 2.4e-06 56.2 94 36.2
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 3.1e-06 55.8 77 39.0
CARHR284710 Cardamine hirsuta HOM05D007693 ORTHO05D002086 3.1e-06 55.8 55 49.1
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 4.1e-06 55.5 71 39.4
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 5.3e-06 55.1 73 41.1
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 7.0e-06 54.7 73 41.1
BcaB04g19811 Brassica carinata HOM05D007462 ORTHO05D002086 9.1e-06 54.3 74 40.5
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 9.1e-06 54.3 73 41.1
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 9.1e-06 54.3 73 39.7
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 9.1e-06 54.3 73 41.1
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 9.1e-06 54.3 73 41.1
BNapus_Darmor_BZH_scaffold_103p00030 Brassica napus HOM05D003591 ORTHO05D015462 9.1e-06 54.3 53 54.7
BNapus_Darmor_BZH_scaffold_104p00030 Brassica napus HOM05D003591 ORTHO05D015462 9.1e-06 54.3 53 54.7
BraSC36t46101Z Brassica rapa HOM05D003591 ORTHO05D015462 9.1e-06 54.3 53 54.7


User provided reference genes

Program Settings