Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p36500 Brassica napus HOM05D008596 ORTHO05D003268 6.6e-84 313.9 151 100.0
BraA03t15718Z Brassica rapa HOM05D008596 ORTHO05D003268 1.5e-43 179.9 117 75.2
BraA05t21116Z Brassica rapa HOM05D008596 ORTHO05D003268 4.8e-42 174.9 94 85.1
BraA05t18958Z Brassica rapa HOM05D008596 ORTHO05D003268 2.0e-40 169.5 94 84.0
C05p36160 Brassica napus HOM05D008596 ORTHO05D003268 3.4e-40 168.7 103 79.6
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 7.6e-40 167.5 98 80.6
A01p26930 Brassica napus HOM05D008596 ORTHO05D003268 2.2e-39 166.0 94 83.0
A05p23070 Brassica napus HOM05D008596 ORTHO05D003268 1.1e-38 163.7 129 65.9
A06p24280 Brassica napus HOM05D008596 ORTHO05D003268 1.1e-38 163.7 129 65.9
A06p25180 Brassica napus HOM05D008596 ORTHO05D003268 1.1e-38 163.7 129 65.9
BraA02t07722Z Brassica rapa HOM05D008596 ORTHO05D003268 1.4e-38 163.3 105 73.3
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 7.2e-38 161.0 113 69.0
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 1.6e-37 159.8 95 77.9
A09p30520 Brassica napus HOM05D008596 ORTHO05D003268 4.6e-37 158.3 94 77.7
A05p24140 Brassica napus HOM05D008596 ORTHO05D003268 1.0e-36 157.1 110 71.8
A10p07860 Brassica napus HOM05D008596 ORTHO05D003268 1.5e-35 153.3 97 76.3
BraSC35t46014Z Brassica rapa HOM05D008596 ORTHO05D003268 1.5e-35 153.3 97 76.3
BcaC09g48540 Brassica carinata HOM05D008596 ORTHO05D003268 7.4e-35 151.0 96 71.9
BraA06t25539Z Brassica rapa HOM05D008596 ORTHO05D003268 1.1e-30 137.1 73 84.9
A05p19660 Brassica napus HOM05D008596 ORTHO05D003268 1.2e-29 133.7 91 72.5
A06p23500 Brassica napus HOM05D008596 ORTHO05D003268 6.5e-23 111.3 54 92.6
BraA06t25541Z Brassica rapa HOM05D008596 ORTHO05D003268 2.5e-22 109.4 58 82.8
A03p66770 Brassica napus HOM05D008596 ORTHO05D003268 3.0e-20 102.4 63 82.5
A01p26840 Brassica napus HOM05D008596 ORTHO05D003268 8.8e-20 100.9 75 72.0
A05p29660 Brassica napus HOM05D008596 ORTHO05D003268 1.3e-15 87.0 70 65.7
BNapus_Darmor_BZH_scaffold_294p00010 Brassica napus HOM05D008596 ORTHO05D003268 7.2e-14 81.3 72 59.7
C02p44760 Brassica napus HOM05D008596 ORTHO05D041475 2.7e-13 79.3 75 48.0
BolC2t10518H Brassica oleracea HOM05D008596 ORTHO05D041475 6.1e-13 78.2 75 48.0
BolC5t32276H Brassica oleracea HOM05D008596 ORTHO05D024662 1.4e-12 77.0 45 82.2
C03p67400 Brassica napus HOM05D008596 ORTHO05D027031 5.2e-12 75.1 111 38.7
BcaC01g02176 Brassica carinata HOM05D008596 ORTHO05D027031 6.7e-12 74.7 111 39.6
C03p67380 Brassica napus HOM05D008596 ORTHO05D027031 6.7e-12 74.7 111 39.6
BcaC06g35963 Brassica carinata HOM05D008596 ORTHO05D031778 8.8e-12 74.3 45 80.0
BolC8t47961H Brassica oleracea HOM05D007986 ORTHO05D039790 4.8e-10 68.6 47 63.8
BcaC04g20740 Brassica carinata HOM05D007738 ORTHO05D010100 5.9e-08 61.6 64 40.6
C05p36550 Brassica napus HOM05D008596 ORTHO05D032374 5.9e-08 61.6 27 85.2
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 5.9e-08 61.6 53 54.7
BolC4t24275H Brassica oleracea HOM05D007986 ORTHO05D003268 1.0e-07 60.8 64 45.3
BcaC05g28706 Brassica carinata HOM05D003421 ORTHO05D003268 1.3e-07 60.5 107 38.3
BcaC03g15143 Brassica carinata HOM05D003421 ORTHO05D003268 2.9e-07 59.3 45 57.8
BcaC02g10760 Brassica carinata HOM05D003421 ORTHO05D003268 3.8e-07 58.9 50 46.0
BcaC07g37388 Brassica carinata HOM05D003421 ORTHO05D003268 5.0e-07 58.5 92 39.1
BcaNung06003 Brassica carinata HOM05D003421 ORTHO05D003268 6.5e-07 58.2 36 61.1
BolC1t03331H Brassica oleracea HOM05D007986 ORTHO05D013025 1.1e-06 57.4 87 37.9
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 1.5e-06 57.0 98 36.7
BcaC06g36330 Brassica carinata HOM05D003421 ORTHO05D003268 1.9e-06 56.6 95 40.0
BolC9t56748H Brassica oleracea HOM05D003421 ORTHO05D003268 3.2e-06 55.8 39 59.0
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 4.2e-06 55.5 74 37.8
BolC4t23765H Brassica oleracea HOM05D003421 ORTHO05D003268 4.2e-06 55.5 40 60.0
BolC9t56870H Brassica oleracea HOM05D003421 ORTHO05D003268 4.2e-06 55.5 95 36.8
BcaC01g01906 Brassica carinata HOM05D003421 ORTHO05D003268 7.2e-06 54.7 80 41.2
BcaC07g37583 Brassica carinata HOM05D008969 ORTHO05D012202 7.2e-06 54.7 40 57.5


User provided reference genes

Program Settings