Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 1.5e-59 232.6 118 100.0
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 4.4e-59 231.1 118 99.2
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 4.4e-59 231.1 118 99.2
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 7.5e-59 230.3 118 99.2
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 9.8e-59 229.9 118 98.3
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 6.4e-58 227.3 118 97.5
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 2.4e-57 225.3 118 97.5
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 3.2e-57 224.9 118 96.6
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 9.2e-57 223.4 118 98.3
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 4.6e-56 221.1 118 93.2
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 7.8e-56 220.3 118 92.4
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 7.8e-56 220.3 118 92.4
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 3.0e-55 218.4 118 91.5
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 3.0e-55 218.4 118 91.5
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 1.6e-53 212.6 113 92.9
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 1.6e-53 212.6 113 92.9
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-52 209.9 107 100.0
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 1.8e-52 209.1 118 89.8
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 8.1e-45 183.7 99 93.9
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 6.8e-44 180.6 96 96.9
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 1.3e-42 176.4 107 86.0
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 2.2e-42 175.6 107 86.0
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 1.3e-39 166.4 119 69.7
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 8.6e-39 163.7 106 83.0
BolC7t42422H Brassica oleracea HOM05D000353 ORTHO05D011975 2.4e-33 145.6 78 91.0
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 7.1e-33 144.1 96 83.3
BcaC05g27208 Brassica carinata HOM05D000353 ORTHO05D011975 4.3e-30 134.8 70 92.9
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 4.3e-30 134.8 118 56.8
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 4.3e-30 134.8 118 56.8
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 9.6e-30 133.7 118 55.9
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 4.7e-29 131.3 118 55.1
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 1.1e-28 130.2 118 54.2
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 1.1e-28 130.2 118 54.2
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 1.8e-28 129.4 118 54.2
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 5.2e-28 127.9 118 54.2
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 5.2e-28 127.9 116 54.3
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 6.9e-28 127.5 118 53.4
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 6.9e-28 127.5 116 53.4
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 6.9e-28 127.5 116 54.3
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 6.9e-28 127.5 118 53.4
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 1.5e-27 126.3 118 54.2
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 2.6e-27 125.6 115 53.9
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 2.6e-27 125.6 116 53.4
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 3.4e-27 125.2 116 52.6
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 4.4e-27 124.8 116 53.4
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 5.8e-27 124.4 116 53.4
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 7.6e-27 124.0 116 52.6
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 1.7e-26 122.9 115 52.2
C07p19110 Brassica napus HOM05D000353 ORTHO05D011975 2.4e-25 119.0 62 91.9
BcaB01g02874 Brassica carinata HOM05D000353 ORTHO05D011975 4.2e-25 118.2 85 67.1
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 5.4e-25 117.9 110 53.6
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 4.6e-24 114.8 108 53.7
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 4.6e-24 114.8 108 53.7
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 6.0e-24 114.4 118 50.8
A05p21310 Brassica napus HOM05D000353 ORTHO05D042653 1.3e-23 113.2 118 57.6
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 1.6e-21 106.3 118 48.3
BcaB05g22042 Brassica carinata HOM05D000353 ORTHO05D000199 3.6e-21 105.1 92 60.9
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 6.2e-21 104.4 106 51.9
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-20 103.2 118 49.2
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 9.0e-20 100.5 90 54.4
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 4.5e-19 98.2 115 45.2
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 5.8e-19 97.8 118 47.5
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 9.9e-19 97.1 108 48.1
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 9.9e-19 97.1 96 54.2
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 2.9e-18 95.5 94 48.9
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 1.1e-17 93.6 115 45.2
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 1.1e-17 93.6 94 47.9
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-17 93.2 118 39.8
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 1.9e-17 92.8 118 44.1
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 3.2e-17 92.0 118 39.8
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 3.2e-17 92.0 118 39.8
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 4.2e-17 91.7 118 39.8
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 4.2e-17 91.7 86 50.0
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 1.2e-16 90.1 118 38.1
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 1.2e-16 90.1 86 48.8
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 4.6e-16 88.2 118 39.0
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 1.0e-15 87.0 94 46.8
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 1.0e-15 87.0 117 43.6
BraA05t21039Z Brassica rapa HOM05D000353 ORTHO05D011975 1.3e-15 86.7 42 97.6
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 3.0e-15 85.5 95 46.3
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 3.9e-15 85.1 80 55.0
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 3.9e-15 85.1 85 52.9
BolC9t55252H Brassica oleracea HOM05D000353 ORTHO05D042653 6.7e-15 84.3 43 97.7
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 8.7e-15 84.0 110 41.8
C09p64180 Brassica napus HOM05D000353 ORTHO05D039625 8.7e-15 84.0 78 52.6
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 1.5e-14 83.2 118 42.4
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 3.3e-14 82.0 63 61.9
BcaC09g50234 Brassica carinata HOM05D000353 ORTHO05D005681 5.6e-14 81.3 89 51.7
BcaB08g35178 Brassica carinata HOM05D000353 ORTHO05D032815 9.6e-14 80.5 80 52.5
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-13 79.7 101 48.5
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 3.7e-13 78.6 96 44.8
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 2.4e-12 75.9 105 38.1
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 4.0e-12 75.1 55 65.5
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 2.6e-11 72.4 110 36.4
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 3.4e-11 72.0 106 39.6
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 5.8e-11 71.2 110 34.5
BcaB07g33228 Brassica carinata HOM05D000353 ORTHO05D023971 8.4e-10 67.4 98 37.8
C06p00360 Brassica napus HOM05D000353 ORTHO05D032815 2.4e-09 65.9 56 57.1
BcaB04g17355 Brassica carinata HOM05D000353 ORTHO05D005681 3.2e-09 65.5 117 35.9
BcaB01g01176 Brassica carinata HOM05D000353 ORTHO05D092964 7.1e-09 64.3 73 39.7
BolC6t35166H Brassica oleracea HOM05D000353 ORTHO05D032815 1.2e-08 63.5 56 55.4
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 1.6e-08 63.2 63 46.0
BcaNung05687 Brassica carinata HOM05D000353 ORTHO05D013242 7.9e-08 60.8 73 42.5
A08p10030 Brassica napus HOM05D000353 ORTHO05D033592 7.9e-08 60.8 91 38.5
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-07 59.7 111 30.6
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 2.3e-07 59.3 98 32.7
BraA08t32999Z Brassica rapa HOM05D000353 ORTHO05D033592 2.3e-07 59.3 86 38.4
BcaB05g23079 Brassica carinata HOM05D000353 ORTHO05D013242 3.0e-07 58.9 69 44.9
BcaB04g18091 Brassica carinata HOM05D000353 ORTHO05D013242 3.9e-07 58.5 72 43.1
A07p09370 Brassica napus HOM05D025466 ORTHO05D013242 6.7e-07 57.8 50 56.0
BraA07t28733Z Brassica rapa HOM05D025466 ORTHO05D013242 6.7e-07 57.8 50 56.0
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 8.7e-07 57.4 111 31.5
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-06 57.0 111 30.6
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-06 57.0 109 33.9
BcaB07g31315 Brassica carinata HOM05D000353 ORTHO05D093832 1.1e-06 57.0 39 66.7
BcaB05g23573 Brassica carinata HOM05D000589 ORTHO05D013242 1.9e-06 56.2 94 37.2
BcaB06g26938 Brassica carinata HOM05D000353 ORTHO05D013242 1.9e-06 56.2 75 44.0
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 3.3e-06 55.5 111 30.6
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 7.4e-06 54.3 111 30.6
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 9.6e-06 53.9 108 28.7


User provided reference genes

Program Settings