Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p35100 Brassica napus HOM05D017413 ORTHO05D033168 3.6e-103 378.3 190 100.0
C01p03280 Brassica napus HOM05D017413 ORTHO05D040322 4.7e-63 245.0 125 99.2
BolC9t58345H Brassica oleracea HOM05D017413 ORTHO05D040322 2.4e-62 242.7 125 98.4
BolC4t23019H Brassica oleracea HOM05D017413 ORTHO05D104739 1.3e-60 236.9 125 96.0
BolC5t32229H Brassica oleracea HOM05D017413 ORTHO05D033168 5.3e-46 188.3 109 89.9
BolC9t53297H Brassica oleracea HOM05D017413 ORTHO05D104653 2.2e-15 86.7 47 93.6
AT4G19250 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 4.4e-08 62.4 43 62.8
AT4G19330 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 4.4e-08 62.4 43 62.8
CARHR224720 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.3e-07 60.8 44 63.6
Carub.0007s0166 Capsella rubella HOM05D000249 ORTHO05D000206 4.8e-07 58.9 42 57.1
CARHR246950 Cardamine hirsuta HOM05D000249 ORTHO05D000206 6.3e-07 58.5 42 61.9
Thhalv10005584m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 6.3e-07 58.5 47 57.4
A06p13420 Brassica napus HOM05D000249 ORTHO05D000206 8.2e-07 58.2 42 59.5
BraA06t24494Z Brassica rapa HOM05D000249 ORTHO05D000206 8.2e-07 58.2 42 57.1
CARHR175770 Cardamine hirsuta HOM05D000249 ORTHO05D000206 8.2e-07 58.2 46 56.5
A08p23370 Brassica napus HOM05D000249 ORTHO05D000206 1.1e-06 57.8 43 60.5
BraA08t34291Z Brassica rapa HOM05D000249 ORTHO05D000206 1.1e-06 57.8 43 60.5
AL6G40430 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.8e-06 57.0 50 50.0
AL7G34820 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.8e-06 57.0 40 57.5
CARHR041170 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.8e-06 57.0 45 57.8
Thhalv10005635m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.4e-06 56.6 43 58.1
A06p43040 Brassica napus HOM05D000249 ORTHO05D000206 3.1e-06 56.2 41 56.1
BraA09t39256Z Brassica rapa HOM05D000249 ORTHO05D000206 3.1e-06 56.2 41 61.0
AL6G40420 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.1e-06 55.8 43 58.1
AL7G11960 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.1e-06 55.8 43 55.8
Thhalv10026900m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.3e-06 55.5 43 55.8
BcaNung01786 Brassica carinata HOM05D000249 ORTHO05D000206 7.0e-06 55.1 43 58.1
CARHR246960 Cardamine hirsuta HOM05D000249 ORTHO05D000206 9.1e-06 54.7 40 60.0
Thhalv10012131m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 9.1e-06 54.7 43 58.1


User provided reference genes

Program Settings