Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p34950 Brassica napus HOM05D001498 ORTHO05D011448 1.1e-136 490.0 247 100.0
C03p80470 Brassica napus HOM05D001498 ORTHO05D011448 7.4e-133 477.2 246 98.0
C09p19430 Brassica napus HOM05D001498 ORTHO05D013028 3.7e-132 474.9 246 97.6
C02p52010 Brassica napus HOM05D001498 ORTHO05D013028 6.9e-131 470.7 246 97.2
C07p30740 Brassica napus HOM05D001498 ORTHO05D011448 1.5e-130 469.5 246 97.2
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 4.5e-130 468.0 246 96.7
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 5.8e-130 467.6 246 96.3
C03p66020 Brassica napus HOM05D001498 ORTHO05D011448 7.6e-130 467.2 244 97.1
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 7.6e-130 467.2 246 95.9
C04p36720 Brassica napus HOM05D001498 ORTHO05D011448 1.3e-129 466.5 246 96.3
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 6.5e-129 464.2 246 95.5
C08p17900 Brassica napus HOM05D001498 ORTHO05D011448 1.1e-128 463.4 246 95.5
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 4.3e-125 451.4 235 96.6
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 4.3e-125 451.4 236 96.6
C03p75890 Brassica napus HOM05D001498 ORTHO05D011448 1.4e-123 446.4 234 96.2
A08p06040 Brassica napus HOM05D001498 ORTHO05D013028 1.5e-122 443.0 246 91.1
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 1.1e-120 436.8 235 93.6
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 1.4e-118 429.9 235 92.3
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 3.0e-118 428.7 235 92.8
BcaC01g06537 Brassica carinata HOM05D001498 ORTHO05D011448 5.1e-118 427.9 235 93.2
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 6.7e-118 427.6 246 89.4
C01p30540 Brassica napus HOM05D001498 ORTHO05D011263 1.5e-117 426.4 237 92.0
BcaB04g18488 Brassica carinata HOM05D001498 ORTHO05D011448 5.7e-117 424.5 246 87.4
BcaC02g10288 Brassica carinata HOM05D001498 ORTHO05D011448 3.8e-113 411.8 235 90.6
A08p08110 Brassica napus HOM05D001498 ORTHO05D011448 7.2e-112 407.5 235 88.9
BraA08t32604Z Brassica rapa HOM05D001498 ORTHO05D011263 4.7e-111 404.8 226 90.7
C03p66360 Brassica napus HOM05D001498 ORTHO05D013028 2.8e-108 395.6 207 96.6
BolC3t18909H Brassica oleracea HOM05D001498 ORTHO05D011448 3.1e-107 392.1 207 95.7
C08p08890 Brassica napus HOM05D001498 ORTHO05D011448 9.1e-107 390.6 204 96.1
BcaC07g38655 Brassica carinata HOM05D001498 ORTHO05D011448 1.0e-105 387.1 247 83.0
BolC9t57314H Brassica oleracea HOM05D001498 ORTHO05D011506 2.1e-103 379.4 207 93.7
BolC6t36734H Brassica oleracea HOM05D001498 ORTHO05D011448 1.3e-100 370.2 196 95.4
C03p44600 Brassica napus HOM05D001498 ORTHO05D011448 2.2e-92 342.8 236 77.5
C07p01260 Brassica napus HOM05D001498 ORTHO05D011448 7.0e-91 337.8 181 95.0
BolC3t13783H Brassica oleracea HOM05D001498 ORTHO05D011448 2.7e-90 335.9 179 94.4
A10p06620 Brassica napus HOM05D001498 ORTHO05D011448 1.2e-85 320.5 175 93.1
C08p06700 Brassica napus HOM05D001498 ORTHO05D011448 3.4e-85 318.9 183 89.1
C01p48960 Brassica napus HOM05D001498 ORTHO05D013028 8.3e-84 314.3 164 97.6
BolC6t38704H Brassica oleracea HOM05D001498 ORTHO05D011448 1.1e-80 303.9 160 93.8
BolC7t40542H Brassica oleracea HOM05D001498 ORTHO05D104051 5.7e-77 291.6 207 75.8
C02p53480 Brassica napus HOM05D001498 ORTHO05D011448 4.9e-76 288.5 152 96.7
C06p18080 Brassica napus HOM05D001498 ORTHO05D011878 8.3e-76 287.7 146 98.6
BraA08t32832Z Brassica rapa HOM05D001498 ORTHO05D011263 1.0e-73 280.8 237 68.8
BraA01t03045Z Brassica rapa HOM05D001498 ORTHO05D011263 3.1e-70 269.2 237 66.2
C09p28440 Brassica napus HOM05D001498 ORTHO05D013033 5.2e-70 268.5 145 91.7
C03p56240 Brassica napus HOM05D001498 ORTHO05D011448 8.9e-70 267.7 181 79.0
BolC3t17912H Brassica oleracea HOM05D001498 ORTHO05D011263 3.4e-69 265.8 237 65.4
BraA08t32949Z Brassica rapa HOM05D001498 ORTHO05D011263 2.4e-67 259.6 212 68.4
C09p21190 Brassica napus HOM05D001498 ORTHO05D011448 5.4e-67 258.5 181 77.3
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 4.6e-66 255.4 204 70.1
A08p07530 Brassica napus HOM05D001498 ORTHO05D013028 2.3e-65 253.1 147 90.5
BolC3t16976H Brassica oleracea HOM05D001498 ORTHO05D011263 5.6e-64 248.4 237 62.9
A07p02030 Brassica napus HOM05D001498 ORTHO05D011448 1.2e-63 247.3 192 72.4
BolC3t19486H Brassica oleracea HOM05D001498 ORTHO05D013033 3.6e-63 245.7 129 93.8
BraA08t32773Z Brassica rapa HOM05D001498 ORTHO05D011263 2.3e-62 243.0 237 63.3
BolC7t45419H Brassica oleracea HOM05D001498 ORTHO05D011878 1.4e-54 217.2 116 94.0
BcaC06g33590 Brassica carinata HOM05D001498 ORTHO05D093683 1.1e-51 207.6 175 65.1
BolC9t54650H Brassica oleracea HOM05D001498 ORTHO05D013033 4.6e-50 202.2 99 98.0
BcaC09g49625 Brassica carinata HOM05D001498 ORTHO05D031765 8.1e-47 191.4 212 48.1
A08p07520 Brassica napus HOM05D001498 ORTHO05D013033 8.9e-46 188.0 94 96.8
BolC1t04860H Brassica oleracea HOM05D001498 ORTHO05D013033 8.9e-46 188.0 94 96.8
BolC2t11286H Brassica oleracea HOM05D001498 ORTHO05D013028 1.7e-44 183.7 98 98.0
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.7e-44 183.7 98 98.0
BolC1t00858H Brassica oleracea HOM05D001498 ORTHO05D013028 2.2e-44 183.3 98 96.9
A01p28570 Brassica napus HOM05D001498 ORTHO05D013028 2.9e-44 183.0 98 94.9
C07p38520 Brassica napus HOM05D001498 ORTHO05D041705 6.4e-44 181.8 175 60.6
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 5.4e-43 178.7 98 94.9
C09p27450 Brassica napus HOM05D001498 ORTHO05D013033 9.3e-43 177.9 95 93.7
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 4.6e-42 175.6 98 93.9
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 7.8e-42 174.9 98 93.9
A10p06860 Brassica napus HOM05D001498 ORTHO05D013028 1.7e-41 173.7 98 92.9
C04p21390 Brassica napus HOM05D001498 ORTHO05D013033 1.3e-39 167.5 83 97.6
A10p06870 Brassica napus HOM05D001498 ORTHO05D013033 2.8e-39 166.4 86 94.2
C06p23310 Brassica napus HOM05D001498 ORTHO05D013033 8.1e-39 164.9 84 95.2
A01p20530 Brassica napus HOM05D001498 ORTHO05D013028 1.4e-38 164.1 87 96.6
A09p33380 Brassica napus HOM05D001498 ORTHO05D013033 1.4e-38 164.1 84 95.2
BraA01t01982Z Brassica rapa HOM05D001498 ORTHO05D013028 1.4e-38 164.1 87 96.6
BraA09t38880Z Brassica rapa HOM05D001498 ORTHO05D013033 1.4e-38 164.1 84 95.2
BraA03t14501Z Brassica rapa HOM05D001498 ORTHO05D013028 4.4e-37 159.1 100 86.0
C06p31040 Brassica napus HOM05D001498 ORTHO05D013033 4.9e-36 155.6 79 94.9
BraA09t38881Z Brassica rapa HOM05D001498 ORTHO05D013028 8.4e-36 154.8 87 92.0
BraA09t40145Z Brassica rapa HOM05D001498 ORTHO05D013033 2.4e-35 153.3 88 88.6
C01p34360 Brassica napus HOM05D001498 ORTHO05D031765 3.5e-34 149.4 140 53.6
BolC1t03406H Brassica oleracea HOM05D001498 ORTHO05D031765 3.5e-34 149.4 140 53.6
BolC6t37504H Brassica oleracea HOM05D001498 ORTHO05D013033 2.3e-33 146.7 73 97.3
BcaC07g38852 Brassica carinata HOM05D001498 ORTHO05D092219 5.6e-32 142.1 120 67.5
BcaB04g18117 Brassica carinata HOM05D001498 ORTHO05D008559 8.1e-31 138.3 88 83.0
BraA01t01576Z Brassica rapa HOM05D007818 ORTHO05D015522 3.1e-30 136.3 144 45.8
A01p25450 Brassica napus HOM05D007818 ORTHO05D015522 6.9e-30 135.2 146 46.6
C01p45320 Brassica napus HOM05D007818 ORTHO05D011878 6.9e-30 135.2 146 46.6
BcaB01g03185 Brassica carinata HOM05D001498 ORTHO05D013028 1.2e-29 134.4 83 83.1
C07p11950 Brassica napus HOM05D007818 ORTHO05D015522 2.0e-29 133.7 240 36.2
BcaC05g26791 Brassica carinata HOM05D001498 ORTHO05D013028 2.6e-29 133.3 83 85.5
C02p15660 Brassica napus HOM05D007818 ORTHO05D011878 4.5e-29 132.5 146 45.9
C05p36060 Brassica napus HOM05D007818 ORTHO05D015522 5.8e-29 132.1 146 45.9
BraA01t02469Z Brassica rapa HOM05D007818 ORTHO05D015522 7.6e-29 131.7 218 37.2
A07p05920 Brassica napus HOM05D007818 ORTHO05D015522 9.9e-29 131.3 236 36.4
C04p35200 Brassica napus HOM05D007818 ORTHO05D015522 9.9e-29 131.3 240 37.1
BraA03t15276Z Brassica rapa HOM05D007818 ORTHO05D011878 1.7e-28 130.6 123 48.0
C01p41510 Brassica napus HOM05D007818 ORTHO05D015522 2.2e-28 130.2 235 35.7
BcaC06g36234 Brassica carinata HOM05D007818 ORTHO05D018576 2.9e-28 129.8 146 44.5
BolC6t35450H Brassica oleracea HOM05D007818 ORTHO05D015522 4.9e-28 129.0 240 36.2
BolC6t36717H Brassica oleracea HOM05D007818 ORTHO05D011878 1.1e-27 127.9 217 36.9
BolC5t32989H Brassica oleracea HOM05D007818 ORTHO05D011878 1.4e-27 127.5 123 48.0
BraA06t25340Z Brassica rapa HOM05D007818 ORTHO05D015522 2.4e-27 126.7 240 35.4
A03p54360 Brassica napus HOM05D001498 ORTHO05D013028 5.5e-27 125.6 72 91.7
BolC3t19390H Brassica oleracea HOM05D007818 ORTHO05D018576 9.3e-27 124.8 146 45.2
BolC4t23619H Brassica oleracea HOM05D007818 ORTHO05D018576 1.8e-25 120.6 141 44.7
BolC1t04861H Brassica oleracea HOM05D001498 ORTHO05D016036 8.7e-25 118.2 89 77.5
BcaC08g42821 Brassica carinata HOM05D007818 ORTHO05D018576 4.3e-24 115.9 146 42.5
BolC9t59179H Brassica oleracea HOM05D007818 ORTHO05D011878 2.1e-23 113.6 201 37.3
BcaC04g19840 Brassica carinata HOM05D007818 ORTHO05D018576 3.7e-23 112.8 155 38.7
C09p17590 Brassica napus HOM05D001498 ORTHO05D013033 3.7e-23 112.8 55 98.2
BraA10t42921Z Brassica rapa HOM05D001498 ORTHO05D011263 4.8e-23 112.5 62 90.3
BcaB06g26019 Brassica carinata HOM05D001498 ORTHO05D091241 8.1e-23 111.7 116 60.3
BcaC01g03920 Brassica carinata HOM05D001498 ORTHO05D091853 4.0e-22 109.4 199 42.7
BolC7t41573H Brassica oleracea HOM05D007818 ORTHO05D015522 6.9e-22 108.6 202 35.1
BolC6t36793H Brassica oleracea HOM05D007818 ORTHO05D011878 9.0e-22 108.2 118 47.5
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 7.6e-21 105.1 87 65.5
BcaB01g01632 Brassica carinata HOM05D001498 ORTHO05D091966 1.0e-20 104.8 246 38.2
BcaC02g09115 Brassica carinata HOM05D001498 ORTHO05D027369 1.7e-20 104.0 53 98.1
C08p06690 Brassica napus HOM05D001498 ORTHO05D027369 1.7e-20 104.0 53 98.1
BolC3t18861H Brassica oleracea HOM05D001498 ORTHO05D041705 2.9e-20 103.2 120 51.7
BcaC04g20365 Brassica carinata HOM05D001498 ORTHO05D095589 4.9e-20 102.4 53 96.2
BcaC05g28434 Brassica carinata HOM05D001498 ORTHO05D013033 8.4e-20 101.7 68 75.0
BcaB03g16299 Brassica carinata HOM05D001498 ORTHO05D096066 2.7e-18 96.7 81 69.1
BcaC01g02373 Brassica carinata HOM05D001498 ORTHO05D094875 2.3e-17 93.6 70 72.9
BcaC09g49197 Brassica carinata HOM05D007818 ORTHO05D011878 3.9e-17 92.8 101 44.6
BolC9t56135H Brassica oleracea HOM05D007818 ORTHO05D011878 3.9e-17 92.8 122 39.3
C05p44350 Brassica napus HOM05D007818 ORTHO05D000013 1.9e-16 90.5 80 51.2
BraSC37t46122Z Brassica rapa HOM05D007818 ORTHO05D011878 1.9e-16 90.5 85 49.4
C01p48070 Brassica napus HOM05D007818 ORTHO05D000013 2.5e-16 90.1 87 49.4
C04p55370 Brassica napus HOM05D007818 ORTHO05D000013 3.3e-16 89.7 85 49.4
C07p06900 Brassica napus HOM05D007818 ORTHO05D000013 3.3e-16 89.7 82 51.2
C05p45440 Brassica napus HOM05D007818 ORTHO05D000013 5.7e-16 89.0 85 48.2
C07p00660 Brassica napus HOM05D007818 ORTHO05D000013 5.7e-16 89.0 85 48.2
C06p26590 Brassica napus HOM05D007818 ORTHO05D015522 2.8e-15 86.7 93 45.2
A10p08820 Brassica napus HOM05D007818 ORTHO05D011878 4.8e-15 85.9 85 47.1
C07p08980 Brassica napus HOM05D007818 ORTHO05D011878 4.8e-15 85.9 90 48.9
C01p38670 Brassica napus HOM05D001498 ORTHO05D013033 8.2e-15 85.1 42 92.9
BraA09t37757Z Brassica rapa HOM05D007818 ORTHO05D015532 8.2e-15 85.1 98 46.9
BolC6t36237H Brassica oleracea HOM05D001498 ORTHO05D013033 3.1e-14 83.2 42 92.9
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 4.1e-14 82.8 42 97.6
BcaB03g16424 Brassica carinata HOM05D007818 ORTHO05D011878 5.3e-14 82.4 93 45.2
BolC3t19185H Brassica oleracea HOM05D007818 ORTHO05D011878 6.9e-14 82.0 124 35.5
C07p12870 Brassica napus HOM05D007818 ORTHO05D011878 9.0e-14 81.6 118 36.4
BcaB05g22882 Brassica carinata HOM05D007818 ORTHO05D011878 2.0e-13 80.5 93 41.9
BolC4t22585H Brassica oleracea HOM05D007818 ORTHO05D018576 2.0e-13 80.5 102 42.2
BolC8t47734H Brassica oleracea HOM05D001498 ORTHO05D032596 3.8e-12 76.3 37 100.0
C07p11030 Brassica napus HOM05D007818 ORTHO05D011878 1.1e-11 74.7 70 48.6
BcaB06g26756 Brassica carinata HOM05D007818 ORTHO05D011878 1.4e-11 74.3 117 39.3
C07p08860 Brassica napus HOM05D007818 ORTHO05D042921 1.4e-11 74.3 114 34.2
BolC7t41300H Brassica oleracea HOM05D007818 ORTHO05D042921 1.4e-11 74.3 114 34.2
BolC3t18888H Brassica oleracea HOM05D007818 ORTHO05D041367 1.9e-11 73.9 119 35.3
BcaC05g28432 Brassica carinata HOM05D001498 ORTHO05D016036 2.5e-11 73.6 69 63.8
C03p66160 Brassica napus HOM05D007818 ORTHO05D041367 2.5e-11 73.6 116 33.6
C04p56140 Brassica napus HOM05D001498 ORTHO05D013033 7.2e-11 72.0 36 94.4
BcaC01g01870 Brassica carinata HOM05D007818 ORTHO05D018576 1.6e-10 70.9 76 47.4
BolC1t02816H Brassica oleracea HOM05D001498 ORTHO05D032596 4.6e-10 69.3 37 91.9
BcaB07g33901 Brassica carinata HOM05D007818 ORTHO05D011878 1.0e-09 68.2 63 50.8
BcaC07g38851 Brassica carinata HOM05D001498 ORTHO05D094988 1.0e-09 68.2 53 73.6
BolC2t11285H Brassica oleracea HOM05D001498 ORTHO05D106766 3.9e-09 66.2 39 87.2
BcaC05g26853 Brassica carinata HOM05D007818 ORTHO05D011878 3.3e-08 63.2 76 44.7
BcaB07g33141 Brassica carinata HOM05D013390 ORTHO05D092746 7.4e-08 62.0 59 49.2
C04p47800 Brassica napus HOM05D007818 ORTHO05D014962 7.4e-08 62.0 268 26.5
C06p04890 Brassica napus HOM05D007818 ORTHO05D011878 2.2e-07 60.5 59 45.8
C04p05450 Brassica napus HOM05D007818 ORTHO05D011878 3.7e-07 59.7 58 51.7
Sp1g31670 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.7e-07 59.7 174 25.9
BcaB06g25861 Brassica carinata HOM05D006142 ORTHO05D023852 1.8e-06 57.4 177 24.9
BcaB07g32208 Brassica carinata HOM05D001498 ORTHO05D027369 2.4e-06 57.0 37 78.4


User provided reference genes

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