Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p34910 Brassica napus HOM05D000135 ORTHO05D011359 1.5e-32 142.9 114 100.0
BolC5t32216H Brassica oleracea HOM05D000135 ORTHO05D011359 3.8e-31 138.3 114 98.2
BcaC05g27517 Brassica carinata HOM05D000135 ORTHO05D011359 8.1e-26 120.6 63 98.4
BraA05t20974Z Brassica rapa HOM05D000135 ORTHO05D011359 4.4e-24 114.8 68 91.2
BcaB02g11072 Brassica carinata HOM05D000135 ORTHO05D011359 2.1e-21 105.9 67 86.6
Sp1g33430 Schrenkiella parvula HOM05D000135 ORTHO05D011359 5.6e-19 97.8 67 76.1
Thhalv10012139m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 2.8e-18 95.5 67 76.1
Thhalv10022182m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 9.9e-16 87.0 67 65.7
Carub.0003s0255 Capsella rubella HOM05D000135 ORTHO05D011359 2.9e-15 85.5 67 62.7
BcaB07g33677 Brassica carinata HOM05D000135 ORTHO05D011359 6.4e-15 84.3 67 62.7
BcaC08g43136 Brassica carinata HOM05D000135 ORTHO05D011359 3.2e-14 82.0 67 62.7
C06p04130 Brassica napus HOM05D000135 ORTHO05D011359 3.2e-14 82.0 67 62.7
A06p03870 Brassica napus HOM05D000135 ORTHO05D011359 4.2e-14 81.6 67 62.7
BraA06t23595Z Brassica rapa HOM05D000135 ORTHO05D011359 4.2e-14 81.6 67 62.7
A05p20660 Brassica napus HOM05D000135 ORTHO05D011359 7.1e-14 80.9 67 70.1
BolC6t35541H Brassica oleracea HOM05D000135 ORTHO05D011359 1.6e-13 79.7 67 61.2
AT3G03410 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 2.1e-13 79.3 67 58.2
AL3G13080 Arabidopsis lyrata HOM05D000227 ORTHO05D011359 3.5e-13 78.6 67 55.2
C06p04190 Brassica napus HOM05D000135 ORTHO05D011359 7.4e-11 70.9 52 71.2
Carub.0004s1794 Capsella rubella HOM05D000135 ORTHO05D000203 2.4e-09 65.9 62 53.2
AL6G28550 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 4.0e-09 65.1 62 54.8
AT5G17470 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 6.9e-09 64.3 62 53.2
CARHR195730 Cardamine hirsuta HOM05D000135 ORTHO05D000203 6.9e-09 64.3 58 56.9
Sp3g02410 Schrenkiella parvula HOM05D000227 ORTHO05D011359 6.9e-09 64.3 64 48.4
BraA03t12154Z Brassica rapa HOM05D017453 ORTHO05D018582 2.6e-08 62.4 61 47.5
AL4G32280 Arabidopsis lyrata HOM05D000135 ORTHO05D011359 7.6e-08 60.8 62 51.6
BcaC05g30534 Brassica carinata HOM05D000135 ORTHO05D011359 3.8e-07 58.5 67 43.3
Sp3g02400 Schrenkiella parvula HOM05D000135 ORTHO05D000203 4.9e-07 58.2 61 45.9
Thhalv10022417m.g Eutrema salsugineum HOM05D000135 ORTHO05D000203 6.4e-07 57.8 61 47.5
AT2G36180 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 8.4e-07 57.4 58 51.7
BcaC09g47744 Brassica carinata HOM05D000135 ORTHO05D011359 1.1e-06 57.0 66 43.9
BNapus_Darmor_BZH_scaffold_162p00140 Brassica napus HOM05D000135 ORTHO05D011359 1.1e-06 57.0 66 43.9
BolC1t05833H Brassica oleracea HOM05D000135 ORTHO05D011359 1.1e-06 57.0 66 43.9
CARHR077420 Cardamine hirsuta HOM05D000135 ORTHO05D000203 1.1e-06 57.0 61 45.9
BcaC05g30277 Brassica carinata HOM05D000135 ORTHO05D011359 1.4e-06 56.6 67 43.3
Carub.0006s1570 Capsella rubella HOM05D000135 ORTHO05D011359 1.4e-06 56.6 62 46.8
AL3G13072 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 1.9e-06 56.2 61 45.9
C05p63420 Brassica napus HOM05D000227 ORTHO05D011359 2.4e-06 55.8 67 41.8
Carub.0004s0480 Capsella rubella HOM05D000135 ORTHO05D000203 3.2e-06 55.5 62 46.8
BcaC05g30276 Brassica carinata HOM05D000135 ORTHO05D011359 9.3e-06 53.9 67 40.3


User provided reference genes

Program Settings