Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 2.2e-73 278.9 138 100.0
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 6.3e-73 277.3 138 99.3
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 5.3e-72 274.2 138 99.3
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 8.8e-67 256.9 130 98.5
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 1.8e-56 222.6 133 88.7
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 1.4e-51 206.5 128 84.4
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 1.9e-45 186.0 109 87.2
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 9.4e-45 183.7 136 72.8
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 9.4e-45 183.7 134 76.1
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 6.1e-44 181.0 135 74.8
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 2.3e-43 179.1 134 76.9
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 4.1e-40 168.3 126 68.3
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 2.7e-39 165.6 108 75.9
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 5.0e-38 161.4 102 78.4
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 5.0e-38 161.4 102 78.4
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 5.0e-38 161.4 103 77.7
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 6.5e-38 161.0 130 65.4
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 8.5e-38 160.6 131 64.9
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 1.9e-37 159.5 99 79.8
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 1.9e-37 159.5 99 79.8
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 1.9e-37 159.5 101 79.2
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 2.5e-37 159.1 116 69.8
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 5.5e-37 157.9 132 62.9
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 7.2e-37 157.5 124 66.1
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 9.4e-37 157.1 135 64.4
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 9.4e-37 157.1 101 78.2
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 9.4e-37 157.1 127 63.0
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.6e-36 156.4 120 65.0
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 2.1e-36 156.0 109 71.6
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 2.1e-36 156.0 101 75.2
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 2.7e-36 155.6 103 75.7
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 2.7e-36 155.6 101 75.2
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 3.6e-36 155.2 135 65.9
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 3.6e-36 155.2 133 60.9
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 4.7e-36 154.8 126 66.7
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 6.1e-36 154.5 134 59.7
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 6.1e-36 154.5 99 75.8
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 8.0e-36 154.1 141 58.9
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 8.0e-36 154.1 99 75.8
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 8.0e-36 154.1 97 74.2
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.0e-35 153.7 120 64.2
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.0e-35 153.7 120 64.2
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 1.4e-35 153.3 97 74.2
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 1.8e-35 152.9 99 75.8
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 1.8e-35 152.9 122 63.1
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 1.8e-35 152.9 120 65.0
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 1.8e-35 152.9 112 67.9
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.8e-35 152.9 96 78.1
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 2.3e-35 152.5 91 80.2
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 3.0e-35 152.1 139 59.0
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 4.0e-35 151.8 133 61.7
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 4.0e-35 151.8 101 74.3
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 4.0e-35 151.8 113 67.3
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 4.0e-35 151.8 112 67.0
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 5.2e-35 151.4 114 70.2
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 6.8e-35 151.0 99 74.7
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.6e-34 149.1 101 73.3
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 2.6e-34 149.1 102 75.5
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 4.4e-34 148.3 94 74.5
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 4.4e-34 148.3 100 76.0
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 4.4e-34 148.3 99 72.7
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 2.2e-33 146.0 100 70.0
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 2.8e-33 145.6 132 58.3
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 3.7e-33 145.2 92 75.0
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 3.7e-33 145.2 88 79.5
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 6.3e-33 144.4 94 73.4
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 1.1e-32 143.7 99 71.7
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 1.4e-32 143.3 145 53.8
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 7.0e-32 141.0 102 65.7
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 2.0e-31 139.4 105 65.7
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 2.7e-31 139.0 99 70.7
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 1.3e-30 136.7 105 63.8
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 2.3e-30 136.0 131 53.4
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 6.6e-30 134.4 112 65.2
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 1.9e-29 132.9 103 66.0
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 2.5e-29 132.5 91 67.0
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 2.5e-29 132.5 93 72.0
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.2e-28 130.2 112 60.7
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 3.6e-28 128.6 107 62.6
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.0e-27 127.1 98 64.3
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 1.0e-27 127.1 105 61.9
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 1.4e-27 126.7 89 70.8
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 4.0e-27 125.2 109 61.5
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 4.0e-27 125.2 114 57.0
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 5.2e-27 124.8 70 82.9
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 6.8e-27 124.4 79 75.9
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 5.7e-26 121.3 87 69.0
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 7.5e-26 120.9 114 59.6
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 9.8e-26 120.6 118 55.1
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 9.8e-26 120.6 85 69.4
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 1.7e-25 119.8 93 61.3
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 1.7e-25 119.8 111 59.5
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 2.2e-25 119.4 77 72.7
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.9e-25 119.0 84 72.6
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 3.5e-23 112.1 133 49.6
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 4.6e-23 111.7 89 58.4
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.7e-22 109.8 76 65.8
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 2.5e-21 105.9 77 63.6
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 2.5e-21 105.9 54 96.3
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 2.5e-21 105.9 132 43.9
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 9.5e-21 104.0 89 58.4
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.2e-18 97.1 73 61.6
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 3.3e-13 79.0 56 73.2
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 6.8e-11 71.2 42 76.2
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 1.2e-10 70.5 89 43.8
Cre07.g357300 Chlamydomonas reinhardtii HOM05D007294 ORTHO05D009205 3.4e-10 68.9 114 33.3
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 1.7e-06 56.6 56 55.4


User provided reference genes

Program Settings