Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 6.1e-230 800.4 395 100.0
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 6.1e-230 800.4 395 100.0
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 5.7e-228 793.9 395 99.2
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 2.2e-224 781.9 395 98.0
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 5.9e-217 757.3 395 95.2
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 1.5e-215 752.7 400 93.2
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 1.2e-214 749.6 400 92.5
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 5.7e-212 740.7 397 92.2
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 8.3e-211 736.9 396 91.2
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 1.1e-210 736.5 396 91.2
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 1.8e-210 735.7 398 91.2
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 7.0e-210 733.8 396 90.9
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 7.0e-210 733.8 396 90.9
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 1.7e-208 729.2 395 90.6
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 1.7e-208 729.2 395 90.9
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 1.7e-208 729.2 395 90.9
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 5.5e-207 724.2 395 91.9
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 2.3e-205 718.8 397 88.7
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 3.4e-204 714.9 397 87.9
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 1.3e-203 713.0 397 87.7
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 2.8e-203 711.8 403 87.8
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 8.6e-200 700.3 405 85.2
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 5.2e-189 664.5 357 91.3
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 1.6e-182 642.9 400 78.5
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 9.9e-180 633.6 398 76.9
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 2.6e-164 582.4 396 68.9
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 1.7e-163 579.7 397 71.0
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 8.4e-163 577.4 395 67.8
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 5.4e-162 574.7 396 69.2
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 1.2e-161 573.5 401 68.8
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 7.8e-161 570.9 401 68.6
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 6.6e-160 567.8 395 67.8
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.9e-159 566.2 395 68.4
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 1.9e-159 566.2 395 67.8
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 2.5e-159 565.8 395 67.1
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 3.3e-159 565.5 395 69.9
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.3e-159 565.1 393 67.4
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 4.3e-159 565.1 394 69.8
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.6e-159 564.7 395 69.6
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 7.3e-159 564.3 393 66.9
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 7.3e-159 564.3 393 66.9
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 1.6e-158 563.1 395 68.4
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 2.8e-158 562.4 395 68.4
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 3.1e-157 558.9 395 67.8
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 4.0e-157 558.5 398 66.1
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 4.0e-157 558.5 366 71.9
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 5.3e-157 558.1 393 68.4
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 9.0e-157 557.4 395 69.1
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 2.0e-156 556.2 398 68.1
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.0e-156 556.2 394 66.2
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.6e-156 555.8 409 64.5
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 4.5e-156 555.1 393 68.7
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 9.9e-156 553.9 396 67.7
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 2.9e-155 552.4 379 69.9
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.9e-155 552.4 395 66.8
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 2.9e-155 552.4 401 65.3
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 4.9e-155 551.6 392 67.9
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 6.4e-155 551.2 370 69.5
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 1.9e-154 549.7 366 69.4
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 3.2e-154 548.9 391 67.5
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 4.2e-154 548.5 394 67.5
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 4.2e-154 548.5 366 70.2
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 7.1e-154 547.7 398 65.6
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 7.1e-154 547.7 425 63.8
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 1.6e-153 546.6 393 66.2
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 2.1e-153 546.2 392 67.1
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.7e-153 545.8 394 67.3
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 4.6e-153 545.0 402 65.7
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 3.0e-152 542.3 390 66.7
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 6.7e-152 541.2 390 66.9
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.5e-151 540.0 394 66.8
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 1.5e-151 540.0 428 61.0
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 3.3e-151 538.9 390 66.2
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 7.4e-151 537.7 367 69.5
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 2.1e-150 536.2 366 68.6
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 3.7e-150 535.4 366 68.3
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 4.8e-150 535.0 384 66.7
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 8.1e-150 534.3 442 60.9
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 1.1e-149 533.9 369 69.1
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 1.4e-149 533.5 371 69.3
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.8e-149 533.1 399 63.9
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 4.0e-149 531.9 400 63.5
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 4.0e-149 531.9 362 68.0
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 4.0e-149 531.9 391 65.2
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 2.0e-148 529.6 391 65.2
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 2.2e-147 526.2 395 63.5
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 2.9e-147 525.8 367 66.2
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 2.9e-147 525.8 399 63.4
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 3.8e-147 525.4 395 63.5
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 6.4e-147 524.6 368 66.0
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 8.4e-147 524.2 367 68.1
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 3.2e-146 522.3 411 63.0
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 3.5e-145 518.8 357 66.4
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 1.9e-143 513.1 401 62.3
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 9.6e-143 510.8 395 62.8
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 1.6e-142 510.0 357 65.8
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 3.4e-140 502.3 529 51.4
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 1.3e-139 500.4 419 60.1
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 6.5e-139 498.0 352 67.3
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 8.4e-139 497.7 333 70.0
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 9.3e-138 494.2 488 52.9
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 2.7e-137 492.7 395 62.8
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 7.9e-137 491.1 386 63.0
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 8.7e-136 487.6 373 64.6
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 1.1e-135 487.3 361 64.3
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 1.1e-135 487.3 395 62.0
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.6e-134 483.4 344 66.0
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.6e-134 483.4 344 66.0
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 1.6e-134 483.4 329 69.0
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.2e-134 483.0 333 69.1
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 7.6e-132 474.6 422 57.8
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 1.3e-131 473.8 319 68.0
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 7.2e-130 468.0 326 69.3
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 9.4e-130 467.6 326 69.3
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 1.5e-127 460.3 389 54.0
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 1.3e-126 457.2 348 62.4
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 9.1e-125 451.1 350 61.7
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 8.5e-123 444.5 406 56.7
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 1.4e-122 443.7 353 58.6
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.9e-122 443.4 297 68.0
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 7.9e-121 438.0 394 55.6
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 5.7e-119 431.8 400 54.0
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 5.3e-117 425.2 293 67.2
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 1.2e-116 424.1 386 50.0
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 1.1e-114 417.5 353 58.6
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 2.5e-114 416.4 369 54.2
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 2.4e-109 399.8 386 52.6
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 7.0e-109 398.3 392 50.0
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 4.5e-108 395.6 248 73.0
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 3.3e-103 379.4 272 69.5
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 3.1e-101 372.9 217 78.3
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 2.9e-99 366.3 255 69.4
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.6e-97 360.5 249 68.3
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 2.2e-86 323.6 206 73.3
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 1.9e-74 283.9 388 38.7
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 1.9e-66 257.3 338 41.4
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 8.1e-65 251.9 318 42.1
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.3e-59 234.6 177 65.5
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 3.8e-46 189.9 176 53.4
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 4.2e-37 159.8 143 59.4
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 1.3e-33 148.3 98 67.3
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 2.9e-30 137.1 85 72.9
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 7.6e-23 112.5 77 70.1
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 1.3e-19 101.7 95 51.6
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 2.3e-19 100.9 74 70.3
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.5e-18 98.2 68 63.2
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 2.2e-17 94.4 108 46.3
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 2.0e-15 87.8 92 44.6
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 2.9e-14 84.0 55 67.3
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 2.9e-14 84.0 55 67.3
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 2.9e-14 84.0 55 67.3
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 8.5e-14 82.4 55 65.5
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 2.5e-13 80.9 54 66.7
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 9.4e-13 79.0 54 61.1
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 7.7e-07 59.3 32 75.0
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 5.0e-06 56.6 53 54.7


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