Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p31230 Brassica napus HOM05D004175 ORTHO05D004664 1.3e-109 399.8 208 100.0
C03p72980 Brassica napus HOM05D004175 ORTHO05D004664 9.0e-108 393.7 208 98.1
BcaC01g02078 Brassica carinata HOM05D004175 ORTHO05D004664 1.4e-95 353.2 205 91.2
C03p57560 Brassica napus HOM05D004175 ORTHO05D004664 1.4e-95 353.2 208 90.9
C09p49510 Brassica napus HOM05D004175 ORTHO05D004664 3.1e-92 342.0 202 89.1
BolC2t08664H Brassica oleracea HOM05D004175 ORTHO05D004664 1.3e-90 336.7 205 86.3
BolC3t18031H Brassica oleracea HOM05D004175 ORTHO05D004664 1.9e-89 332.8 181 96.7
C02p31840 Brassica napus HOM05D004175 ORTHO05D004664 1.8e-84 316.2 202 84.2
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 1.1e-81 307.0 174 92.0
C07p36980 Brassica napus HOM05D004175 ORTHO05D004664 3.6e-80 302.0 183 87.4
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 2.3e-79 299.3 174 89.1
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 1.2e-78 297.0 174 89.1
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 1.3e-77 293.5 174 87.4
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 2.8e-77 292.4 174 87.4
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 1.1e-76 290.4 174 86.8
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 1.1e-76 290.4 174 86.8
BcaC04g19363 Brassica carinata HOM05D004175 ORTHO05D004664 2.7e-75 285.8 174 86.2
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 5.9e-75 284.6 174 85.6
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 5.9e-75 284.6 174 85.6
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 1.7e-74 283.1 174 82.8
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 2.2e-74 282.7 174 82.2
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 3.2e-73 278.9 174 82.8
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 6.1e-72 274.6 168 85.1
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 1.8e-68 263.1 189 73.0
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 2.4e-68 262.7 174 81.0
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 7.0e-68 261.2 174 79.9
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 7.0e-68 261.2 174 79.9
C01p01530 Brassica napus HOM05D004175 ORTHO05D004664 2.7e-67 259.2 152 90.1
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 3.8e-66 255.4 174 77.6
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 5.5e-65 251.5 174 73.0
BcaC01g02978 Brassica carinata HOM05D004175 ORTHO05D004664 3.6e-64 248.8 209 70.3
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 1.0e-63 247.3 174 71.3
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 1.4e-63 246.9 192 67.7
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 5.7e-62 241.5 174 70.1
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 7.5e-62 241.1 174 70.1
C04p04320 Brassica napus HOM05D004175 ORTHO05D004664 1.7e-61 240.0 146 87.0
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 1.7e-61 240.0 192 65.6
BcaC03g15042 Brassica carinata HOM05D004175 ORTHO05D004664 2.2e-61 239.6 143 90.9
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 4.9e-61 238.4 177 68.9
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 1.1e-60 237.3 174 69.0
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 5.4e-60 235.0 177 66.7
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 5.4e-60 235.0 177 67.2
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 7.8e-59 231.1 189 66.7
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 1.7e-58 229.9 177 65.0
BolC7t44210H Brassica oleracea HOM05D004175 ORTHO05D004664 5.0e-58 228.4 122 99.2
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 1.1e-57 227.3 192 64.6
BcaC06g33783 Brassica carinata HOM05D004175 ORTHO05D004664 1.5e-57 226.9 143 83.9
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 1.9e-57 226.5 174 65.5
Aa31LG1G8760 Aethionema arabicum HOM05D004175 ORTHO05D004664 2.8e-56 222.6 177 67.8
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 2.8e-56 222.6 180 62.8
Cpa.g.sc40.51 Carica papaya HOM05D004175 ORTHO05D004664 6.8e-55 218.0 174 65.5
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 1.2e-54 217.2 177 63.8
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 2.0e-54 216.5 174 64.4
MD15G1194400 Malus domestica HOM05D004175 ORTHO05D004664 4.4e-54 215.3 177 65.0
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 5.8e-54 214.9 174 65.5
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 5.8e-54 214.9 174 65.5
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 5.8e-54 214.9 174 65.5
FvH4_1g05880 Fragaria vesca HOM05D004175 ORTHO05D004664 1.3e-53 213.8 174 65.5
TWI32G1108 Tripterygium wilfordii HOM05D004175 ORTHO05D004664 4.9e-53 211.8 195 58.5
CANSAT56G2035 Cannabis sativa HOM05D004175 ORTHO05D004664 6.4e-53 211.5 177 63.8
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 8.3e-53 211.1 192 59.4
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 1.1e-52 210.7 174 62.1
COL.COLO4_34774 Corchorus olitorius HOM05D004175 ORTHO05D004664 1.1e-52 210.7 139 77.7
FAN23G2598 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.1e-52 210.7 174 64.9
Thecc.09G102700 Theobroma cacao HOM05D004175 ORTHO05D004664 1.4e-52 210.3 174 63.8
Nn8g39121 Nelumbo nucifera HOM05D004175 ORTHO05D004664 1.9e-52 209.9 174 62.6
Ca_17354_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 2.4e-52 209.5 192 57.8
Ca_29618_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 2.4e-52 209.5 192 57.8
Phvul.002G310000 Phaseolus vulgaris HOM05D004175 ORTHO05D004664 2.4e-52 209.5 192 59.4
CSS0007429 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 3.2e-52 209.1 177 59.3
CSS0045871 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 3.2e-52 209.1 177 59.3
Duzib168G0201 Durio zibethinus HOM05D004175 ORTHO05D004664 3.2e-52 209.1 177 61.6
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 3.2e-52 209.1 174 63.8
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 4.1e-52 208.8 177 63.8
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 4.1e-52 208.8 177 63.8
Gohir.A06G066500 Gossypium hirsutum HOM05D004175 ORTHO05D004664 9.2e-52 207.6 177 60.5
Sabra18G0074500 Salix brachista HOM05D004175 ORTHO05D004664 1.2e-51 207.2 174 64.4
Sc08g0007900 Simmondsia chinensis HOM05D004175 ORTHO05D004664 1.2e-51 207.2 177 61.0
BolC3t19136H Brassica oleracea HOM05D004175 ORTHO05D004664 2.0e-51 206.5 112 92.9
Lalb_Chr05g0223141 Lupinus albus HOM05D004175 ORTHO05D004664 2.7e-51 206.1 177 61.0
Potri.018G086200 Populus trichocarpa HOM05D004175 ORTHO05D004664 2.7e-51 206.1 189 61.4
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 3.5e-51 205.7 189 59.3
vmacro10860 Vaccinium macrocarpon HOM05D004175 ORTHO05D004664 3.5e-51 205.7 174 61.5
Gohir.D06G065000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 6.0e-51 204.9 177 59.9
THA.LOC104811087 Tarenaya hassleriana HOM05D004175 ORTHO05D004664 1.0e-50 204.1 174 62.6
Manes.16G110500 Manihot esculenta HOM05D004175 ORTHO05D004664 1.3e-50 203.8 189 60.8
Glyma.08G034700 Glycine max HOM05D004175 ORTHO05D004664 1.7e-50 203.4 189 59.3
Actinidia09442 Actinidia chinensis HOM05D001936 ORTHO05D002296 2.3e-50 203.0 174 61.5
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 2.3e-50 203.0 189 61.4
Gohir.A13G195800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 3.0e-50 202.6 174 60.9
Duzib187G1630 Durio zibethinus HOM05D004175 ORTHO05D004664 6.6e-50 201.4 174 60.3
ClCG11G002240 Citrullus lanatus HOM05D004175 ORTHO05D004664 1.1e-49 200.7 191 59.7
ECA234G4006 Erigeron canadensis HOM05D004175 ORTHO05D004664 1.5e-49 200.3 174 60.3
Gohir.D13G201000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 2.5e-49 199.5 174 59.8
Gorai.013G229800 Gossypium raimondii HOM05D004175 ORTHO05D004664 2.5e-49 199.5 174 59.8
Gorai.010G076100 Gossypium raimondii HOM05D004175 ORTHO05D004664 4.3e-49 198.7 172 59.9
Sopen05g014800 Solanum pennellii HOM05D004175 ORTHO05D004664 5.6e-49 198.4 177 58.8
PSO210G6864 Papaver somniferum HOM05D004175 ORTHO05D004664 7.3e-49 198.0 177 58.2
CsaV3_2G001990 Cucumis sativus L. HOM05D004175 ORTHO05D004664 9.5e-49 197.6 174 62.1
MELO3C004581.2 Cucumis melo HOM05D004175 ORTHO05D004664 1.6e-48 196.8 188 59.6
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 1.6e-48 196.8 177 59.3
Ah.14g083210 Amaranthus hybridus HOM05D004175 ORTHO05D004664 2.8e-48 196.1 174 61.5
Nn2g11614 Nelumbo nucifera HOM05D004175 ORTHO05D004664 2.8e-48 196.1 174 59.2
Solyc05g018150.3 Solanum lycopersicum HOM05D004175 ORTHO05D004664 3.6e-48 195.7 177 58.2
CAN.G274.4 Capsicum annuum HOM05D004175 ORTHO05D004664 4.7e-48 195.3 177 59.3
CDE02G1631 Ceratophyllum demersum HOM05D004175 ORTHO05D004664 4.7e-48 195.3 174 60.3
Eucgr.C03782 Eucalyptus grandis HOM05D004175 ORTHO05D004664 6.2e-48 194.9 177 59.9
TAR383G0226 Trochodendron aralioides HOM05D004175 ORTHO05D004664 1.4e-47 193.7 177 57.1
CAN.G525.1 Capsicum annuum HOM05D004175 ORTHO05D004664 1.8e-47 193.4 174 59.8
Peaxi162Scf00001g00131 Petunia axillaris HOM05D004175 ORTHO05D004664 2.3e-47 193.0 177 57.6
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 2.3e-47 193.0 208 53.8
MBI04_g40471_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 3.1e-47 192.6 174 59.2
Sed0003540 Sechium edule HOM05D004175 ORTHO05D004664 6.8e-47 191.4 174 59.8
PSO210G7624 Papaver somniferum HOM05D004175 ORTHO05D004664 1.2e-46 190.7 177 55.9
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 1.5e-46 190.3 186 53.8
Glyma.05G227700 Glycine max HOM05D004175 ORTHO05D004664 3.4e-46 189.1 192 54.7
GSVIVG01015319001 Vitis vinifera HOM05D004175 ORTHO05D004664 4.4e-46 188.7 174 56.9
Oeu017825.1 Olea europaea HOM05D004175 ORTHO05D004664 7.5e-46 188.0 174 57.5
Migut.J01107 Erythranthe guttata HOM05D004175 ORTHO05D004664 9.8e-46 187.6 174 57.5
Potri.006G163900 Populus trichocarpa HOM05D004175 ORTHO05D004664 9.8e-46 187.6 194 55.2
Cfa003199 Carpinus fangiana HOM05D004175 ORTHO05D004664 2.9e-45 186.0 192 54.7
MSTRG.6019 Avicennia marina HOM05D004175 ORTHO05D004664 1.1e-44 184.1 174 56.9
Hund26252 Selenicereus undatus HOM05D004175 ORTHO05D004664 9.2e-44 181.0 174 55.2
SGA_v2.0_scaffold62G21556 Striga asiatica HOM05D004175 ORTHO05D004664 1.2e-43 180.6 177 56.5
Psat7g016360 Pisum sativum HOM05D004175 ORTHO05D004664 4.6e-43 178.7 177 55.4
Os02g0230100 Oryza sativa ssp. japonica HOM05D004175 ORTHO05D004664 3.9e-42 175.6 172 54.7
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.5e-41 172.9 177 54.8
Zm00001eb204970 Zea mays HOM05D004175 ORTHO05D004664 3.3e-41 172.6 174 52.3
Mapoly0051s0012 Marchantia polymorpha HOM05D004175 ORTHO05D004664 8.1e-40 167.9 175 49.1
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 1.1e-39 167.5 174 52.9
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 4.4e-38 162.2 192 50.0
Lalb_Chr09g0331471 Lupinus albus HOM05D004175 ORTHO05D004664 7.5e-38 161.4 170 54.1
Pp3c1_38690 Physcomitrium patens HOM05D004175 ORTHO05D004664 1.4e-36 157.1 174 46.6
A07p01400 Brassica napus HOM05D004175 ORTHO05D004664 4.1e-36 155.6 115 73.0
unitig_26.g8970 Utricularia gibba HOM05D004175 ORTHO05D004664 2.7e-35 152.9 159 51.6
Nitab4.5_0000012g0030 Nicotiana tabacum HOM05D004175 ORTHO05D004664 7.8e-35 151.4 141 60.3
Gorai.001G184800 Gossypium raimondii HOM05D004175 ORTHO05D004664 3.9e-34 149.1 116 63.8
MBI04_g06580_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 4.3e-33 145.6 109 68.8
SEGI_33191 Sequoiadendron giganteum HOM05D004175 ORTHO05D004664 2.1e-32 143.3 174 43.7
Nitab4.5_0003199g0020 Nicotiana tabacum HOM05D004175 ORTHO05D004664 1.8e-31 140.2 103 69.9
BraA03t14262Z Brassica rapa HOM05D004175 ORTHO05D004664 1.2e-30 137.5 109 69.7
SMO337G0008 Selaginella moellendorffii HOM05D004175 ORTHO05D004664 2.2e-29 133.3 180 42.2
AagrBONN_evm.TU.Sc2ySwM_117.1201 Anthoceros agrestis HOM05D004175 ORTHO05D004664 1.1e-28 131.0 177 41.2
Glyma.08G276800 Glycine max HOM05D004175 ORTHO05D004664 1.2e-27 127.5 154 51.9
C03p68800 Brassica napus HOM05D004175 ORTHO05D004664 7.8e-27 124.8 62 98.4
Pp3c2_9120 Physcomitrium patens HOM05D004175 ORTHO05D004664 8.7e-26 121.3 177 38.4
CBR_g36965 Chara braunii HOM05D004175 ORTHO05D004664 1.1e-25 120.9 175 41.1
Lj7A662T62 Lonicera japonica HOM05D004175 ORTHO05D004664 4.3e-25 119.0 113 54.0
MD03G1179500 Malus domestica HOM05D004175 ORTHO05D004664 1.1e-23 114.4 158 52.5
Gorai.009G408400 Gossypium raimondii HOM05D004175 ORTHO05D004664 4.4e-22 109.0 111 52.3
FAN10G1780 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.3e-17 92.8 75 66.7
FAN10G3383 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.3e-17 92.8 75 66.7
FAN10G3778 Fragaria x ananassa HOM05D004175 ORTHO05D004664 7.3e-17 91.7 75 65.3
Cre05.g234655 Chlamydomonas reinhardtii HOM05D004175 ORTHO05D004664 1.4e-15 87.4 134 41.8
FAN10G2625 Fragaria x ananassa HOM05D004175 ORTHO05D004664 7.6e-14 81.6 68 64.7
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.1e-12 77.8 91 53.8
FvH4_5g23601 Fragaria vesca HOM05D004175 ORTHO05D045656 1.6e-11 73.9 69 60.9
BolC4t22068H Brassica oleracea HOM05D004175 ORTHO05D004664 4.6e-11 72.4 39 84.6
FAN20G2587 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.8e-10 70.5 70 58.6
FAN28G1141 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.8e-10 70.5 68 57.4
PRCOL_00004941 Prasinoderma coloniale HOM05D004175 ORTHO05D004664 2.3e-10 70.1 141 36.9
FAN19G2726 Fragaria x ananassa HOM05D004175 ORTHO05D004664 7.4e-09 65.1 62 56.5
FvH4_3g18060 Fragaria vesca HOM05D004175 ORTHO05D004664 9.6e-09 64.7 81 49.4
Gohir.D04G104800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 2.0e-06 57.0 58 46.6


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