Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 4.0e-61 238.0 131 100.0
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 4.0e-61 238.0 131 100.0
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 3.4e-60 235.0 131 99.2
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 3.4e-60 235.0 131 99.2
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 3.4e-60 235.0 131 99.2
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 1.3e-56 223.0 130 92.3
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 1.3e-56 223.0 130 92.3
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 4.3e-55 218.0 131 90.8
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 4.0e-53 211.5 130 90.0
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 8.9e-53 210.3 131 89.3
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 1.5e-52 209.5 131 87.8
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.5e-52 209.5 131 88.5
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 3.4e-52 208.4 131 87.0
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 5.8e-52 207.6 113 99.1
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 5.8e-52 207.6 131 87.0
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 9.9e-52 206.8 131 86.3
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 3.7e-51 204.9 134 86.6
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.9e-50 202.6 131 82.4
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.9e-50 202.6 130 83.8
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 3.2e-50 201.8 129 85.3
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 5.4e-50 201.1 130 83.1
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 9.2e-50 200.3 131 81.7
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 2.1e-49 199.1 131 80.2
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 2.7e-49 198.7 131 80.2
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.7e-49 198.7 131 80.2
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 3.5e-49 198.4 130 83.1
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 4.6e-49 198.0 131 80.9
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.0e-49 197.6 130 82.3
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 6.0e-49 197.6 130 82.3
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 6.0e-49 197.6 129 80.6
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 6.0e-49 197.6 131 80.9
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 7.8e-49 197.2 131 78.6
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 7.8e-49 197.2 129 81.4
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.0e-48 196.8 131 79.4
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 1.3e-48 196.4 131 83.2
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 1.3e-48 196.4 129 79.8
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.3e-48 196.4 131 79.4
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.3e-48 196.4 131 79.4
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 1.3e-48 196.4 131 77.9
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.3e-48 196.4 131 77.9
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 1.7e-48 196.1 130 79.2
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.7e-48 196.1 130 82.3
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.0e-48 195.3 130 82.3
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 3.9e-48 194.9 129 80.6
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 3.9e-48 194.9 131 80.2
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 3.9e-48 194.9 131 79.4
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 5.1e-48 194.5 131 79.4
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 5.1e-48 194.5 131 79.4
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 6.6e-48 194.1 131 79.4
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 8.6e-48 193.7 126 80.2
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 8.6e-48 193.7 131 78.6
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.6e-48 193.7 130 80.0
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 8.6e-48 193.7 129 79.1
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 1.1e-47 193.4 131 79.4
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 1.1e-47 193.4 129 79.8
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.1e-47 193.4 126 81.0
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 1.1e-47 193.4 125 80.0
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.1e-47 193.4 126 81.7
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 1.5e-47 193.0 129 78.3
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 1.5e-47 193.0 131 78.6
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 1.5e-47 193.0 129 78.3
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 1.5e-47 193.0 126 79.4
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.9e-47 192.6 129 78.3
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 2.5e-47 192.2 130 79.2
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 2.5e-47 192.2 131 76.3
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.3e-47 191.8 131 78.6
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 7.3e-47 190.7 126 79.4
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 7.3e-47 190.7 126 80.2
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 1.2e-46 189.9 130 76.2
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 1.2e-46 189.9 131 75.6
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 1.2e-46 189.9 126 79.4
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 3.6e-46 188.3 130 80.0
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 8.1e-46 187.2 125 77.6
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.8e-45 186.0 119 84.9
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 3.1e-45 185.3 130 78.5
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 1.5e-44 183.0 131 76.3
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 2.6e-44 182.2 138 71.7
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 2.6e-44 182.2 131 72.5
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 3.4e-44 181.8 139 72.7
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.9e-42 176.0 129 70.5
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.9e-42 176.0 144 68.8
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 2.4e-42 175.6 119 81.5
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.4e-42 175.6 129 70.5
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 3.2e-42 175.3 113 79.6
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 4.2e-42 174.9 186 57.0
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 2.1e-41 172.6 122 77.9
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 2.7e-41 172.2 111 80.2
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 2.7e-41 172.2 111 83.8
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 7.8e-41 170.6 124 71.0
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 7.8e-41 170.6 126 72.2
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.0e-40 170.2 121 77.7
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.3e-40 169.9 129 70.5
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 3.0e-40 168.7 113 77.9
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 8.7e-40 167.2 121 76.0
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 3.3e-39 165.2 106 82.1
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 4.8e-38 161.4 119 72.3
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 6.2e-38 161.0 111 73.9
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 1.1e-37 160.2 111 79.3
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 1.1e-37 160.2 104 81.7
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.8e-37 159.5 105 80.0
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 2.4e-37 159.1 108 75.0
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 2.4e-37 159.1 129 69.0
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 3.1e-37 158.7 119 72.3
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 4.0e-37 158.3 122 71.3
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 6.9e-37 157.5 133 69.2
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.5e-36 156.4 111 72.1
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.4e-36 154.8 105 77.1
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 2.2e-35 152.5 123 65.0
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 2.9e-35 152.1 92 85.9
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 3.8e-35 151.8 92 84.8
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 4.9e-35 151.4 107 73.8
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 8.4e-35 150.6 92 84.8
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 3.2e-34 148.7 131 65.6
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 4.2e-34 148.3 131 60.3
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 7.1e-34 147.5 91 83.5
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 7.1e-34 147.5 124 62.9
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 1.2e-33 146.7 91 82.4
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 3.5e-33 145.2 92 82.6
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 3.5e-33 145.2 92 80.4
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 3.5e-33 145.2 124 64.5
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 4.6e-33 144.8 101 78.2
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 2.3e-32 142.5 87 86.2
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 1.9e-31 139.4 87 82.8
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 3.3e-31 138.7 92 77.2
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 3.3e-31 138.7 106 67.0
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 9.6e-31 137.1 92 76.1
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 9.6e-31 137.1 84 83.3
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.1e-30 136.0 131 61.8
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.1e-29 133.7 87 81.6
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 3.1e-29 132.1 88 79.5
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 6.9e-29 131.0 90 76.7
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 5.8e-28 127.9 98 71.4
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.1e-26 123.6 95 74.7
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 3.5e-25 118.6 71 85.9
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 3.5e-25 118.6 92 72.8
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 6.0e-25 117.9 92 72.8
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.6e-23 111.3 88 69.3
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 3.4e-20 102.1 119 49.6
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 1.0e-19 100.5 202 39.1
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.8e-19 98.6 61 83.6
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 2.7e-17 92.4 63 74.6
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 1.0e-16 90.5 111 50.5
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.8e-16 89.7 125 41.6
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 6.7e-16 87.8 67 65.7
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 1.9e-15 86.3 64 68.8
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 5.7e-15 84.7 66 66.7
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 5.7e-15 84.7 64 67.2
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 7.4e-15 84.3 78 57.7
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 9.6e-15 84.0 112 44.6
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 3.7e-14 82.0 65 66.2
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 3.1e-13 79.0 68 60.3
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 4.1e-13 78.6 170 38.8
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.8e-08 63.2 127 34.6
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 3.7e-06 55.5 123 32.5


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