Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 1.8e-166 589.3 332 100.0
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 1.8e-166 589.3 332 100.0
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 9.2e-163 577.0 348 95.1
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 3.2e-155 552.0 332 91.6
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 1.5e-152 543.1 338 89.6
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 3.2e-139 498.8 337 82.8
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 3.9e-129 465.3 356 79.2
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 9.6e-128 460.7 352 79.3
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 2.4e-126 456.1 344 78.5
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 1.5e-125 453.4 355 78.9
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 1.9e-123 446.4 350 79.7
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 3.4e-117 425.6 354 73.7
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 3.7e-111 405.6 353 73.1
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 1.7e-92 343.6 323 69.0
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 1.3e-76 290.8 400 53.0
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 4.7e-74 282.3 285 59.3
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 3.7e-71 272.7 307 55.7
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 1.1e-70 271.2 290 54.5
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 1.4e-70 270.8 303 54.1
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 1.4e-70 270.8 294 55.4
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 1.4e-70 270.8 294 55.8
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 7.0e-70 268.5 413 46.7
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 1.2e-69 267.7 262 60.3
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 1.3e-68 264.2 225 63.6
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 2.9e-68 263.1 293 54.9
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 3.8e-68 262.7 278 57.6
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 3.8e-68 262.7 241 61.8
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 5.0e-68 262.3 280 56.1
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 5.0e-68 262.3 217 63.1
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 6.5e-68 261.9 284 55.6
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 8.6e-68 261.5 267 58.4
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 1.5e-67 260.8 225 65.3
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 1.9e-67 260.4 311 52.4
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 1.9e-67 260.4 217 63.1
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 1.9e-67 260.4 217 63.1
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 2.5e-67 260.0 280 55.7
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 4.2e-67 259.2 418 44.0
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 4.2e-67 259.2 267 57.3
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 7.2e-67 258.5 287 54.4
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 1.6e-66 257.3 283 55.8
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 1.6e-66 257.3 281 56.2
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 2.1e-66 256.9 285 55.1
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 2.8e-66 256.5 301 51.8
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 2.8e-66 256.5 275 56.7
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 4.7e-66 255.8 282 56.7
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 1.8e-65 253.8 304 54.9
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 1.8e-65 253.8 217 64.5
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 1.8e-65 253.8 299 52.2
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 2.3e-65 253.4 239 61.1
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 3.0e-65 253.1 308 51.9
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 2.6e-64 250.0 216 61.6
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 3.4e-64 249.6 439 44.0
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 3.4e-64 249.6 226 60.6
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 2.2e-63 246.9 304 53.0
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 3.7e-63 246.1 256 54.7
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 4.9e-63 245.7 287 53.7
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 6.3e-63 245.4 244 58.6
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 1.4e-62 244.2 235 57.0
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 2.0e-61 240.4 224 59.8
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 2.0e-61 240.4 347 45.5
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 1.0e-60 238.0 252 56.0
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 1.3e-60 237.7 287 52.3
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 2.3e-60 236.9 219 60.7
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 2.9e-60 236.5 279 52.7
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 2.9e-60 236.5 319 53.0
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 3.8e-60 236.1 310 50.6
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 6.6e-60 235.3 299 51.2
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 8.6e-60 235.0 233 56.7
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 1.1e-59 234.6 250 56.4
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 1.9e-59 233.8 284 52.1
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 1.9e-59 233.8 210 62.4
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 3.3e-59 233.0 242 56.2
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 4.3e-59 232.6 300 49.0
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 7.3e-59 231.9 211 60.2
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 2.1e-58 230.3 295 52.5
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 6.1e-58 228.8 283 52.7
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 1.0e-57 228.0 245 55.5
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 1.8e-57 227.3 282 52.8
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 2.3e-57 226.9 270 52.6
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 3.0e-57 226.5 225 56.9
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 3.0e-57 226.5 291 50.9
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 6.8e-57 225.3 226 55.8
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 8.9e-57 224.9 290 50.7
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 8.9e-57 224.9 290 50.7
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 8.9e-57 224.9 396 45.5
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 1.2e-56 224.6 253 54.9
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.2e-56 224.6 291 50.5
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 1.2e-56 224.6 223 55.2
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 3.4e-56 223.0 295 49.8
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 3.4e-56 223.0 262 53.8
BcaB03g13895 Brassica carinata HOM05D004030 ORTHO05D004952 5.8e-56 222.2 224 59.8
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.7e-55 220.7 281 51.6
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 4.9e-55 219.2 290 49.0
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 8.3e-55 218.4 200 60.0
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.1e-54 218.0 309 48.5
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 1.9e-54 217.2 333 43.2
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.4e-54 216.9 285 49.5
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 2.4e-54 216.9 236 53.8
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 1.2e-53 214.5 165 68.5
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 6.0e-53 212.2 233 52.8
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 7.8e-53 211.8 213 54.9
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 1.3e-52 211.1 189 62.4
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 8.6e-52 208.4 237 51.1
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 1.9e-51 207.2 269 47.2
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 2.5e-51 206.8 213 54.5
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 2.8e-50 203.4 271 48.3
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 1.4e-49 201.1 302 51.0
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 4.4e-48 196.1 168 61.9
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 7.5e-48 195.3 308 47.7
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 2.2e-47 193.7 223 52.5
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 2.2e-47 193.7 359 39.3
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 1.1e-46 191.4 210 52.4
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 7.3e-43 178.7 277 44.4
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 1.2e-42 177.9 285 48.1
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 1.7e-39 167.5 161 55.9
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 3.7e-39 166.4 193 50.8
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 1.9e-38 164.1 263 41.8
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 1.0e-36 158.3 260 40.8
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 1.0e-36 158.3 329 40.1
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 3.9e-36 156.4 288 39.9
Cpa.g.sc7.87 Carica papaya HOM05D004030 ORTHO05D004952 1.9e-35 154.1 134 64.2
Actinidia35586 Actinidia chinensis HOM05D004030 ORTHO05D004952 1.2e-34 151.4 154 57.8
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 4.7e-34 149.4 269 41.3
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 4.0e-33 146.4 189 49.7
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.6e-29 134.4 137 60.6
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 4.6e-29 132.9 279 36.9
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 7.8e-29 132.1 111 63.1
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 1.7e-28 131.0 200 44.5
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 8.7e-28 128.6 278 36.0
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.1e-27 128.3 123 55.3
CDE10G0435 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 2.5e-27 127.1 139 51.8
Lj9A197T43 Lonicera japonica HOM05D004030 ORTHO05D004952 3.3e-27 126.7 152 52.0
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 2.1e-26 124.0 103 59.2
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 1.8e-25 120.9 207 38.6
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.9e-22 110.9 70 72.9
Aqoxy2G00428 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 2.4e-22 110.5 183 42.6
Nitab4.5_0000271g0330 Nicotiana tabacum HOM05D004030 ORTHO05D004952 3.2e-22 110.2 203 44.3
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 4.2e-22 109.8 72 76.4
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 7.1e-22 109.0 70 71.4
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.2e-21 108.2 69 73.9
Nitab4.5_0004602g0020 Nicotiana tabacum HOM05D004030 ORTHO05D004952 2.7e-21 107.1 97 58.8
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 9.6e-19 98.6 86 54.7
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 4.8e-18 96.3 65 70.8
unitig_899.g15398 Utricularia gibba HOM05D004030 ORTHO05D004952 6.2e-18 95.9 349 30.9
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 4.0e-17 93.2 85 49.4
Actinidia37045 Actinidia chinensis HOM05D004030 ORTHO05D004952 4.5e-16 89.7 243 33.7
FAN23G1607 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.3e-12 78.2 80 55.0
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 1.5e-11 74.7 182 32.4
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 1.3e-10 71.6 99 35.4
A07p10840 Brassica napus HOM05D004030 ORTHO05D041112 1.6e-10 71.2 51 64.7
BraA07t28874Z Brassica rapa HOM05D004030 ORTHO05D041112 1.6e-10 71.2 51 64.7
Lalb_Chr15g0086171 Lupinus albus HOM05D004030 ORTHO05D004952 8.4e-07 58.9 89 47.2


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