Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p27660 Brassica napus HOM05D000470 ORTHO05D041147 1.5e-47 192.6 101 100.0
BolC5t31485H Brassica oleracea HOM05D000470 ORTHO05D041147 1.5e-47 192.6 101 100.0
Sp2g14460 Schrenkiella parvula HOM05D000470 ORTHO05D000348 1.4e-29 132.9 136 60.3
Thhalv10004291m.g Eutrema salsugineum HOM05D000470 ORTHO05D000348 4.1e-29 131.3 136 58.8
A06p43030 Brassica napus HOM05D000470 ORTHO05D000348 9.0e-29 130.2 136 59.6
BcaB01g00274 Brassica carinata HOM05D000470 ORTHO05D000348 1.7e-27 125.9 136 58.1
AL5G13400 Arabidopsis lyrata HOM05D000470 ORTHO05D000348 2.2e-27 125.6 136 55.9
AT2G03620 Arabidopsis thaliana HOM05D000470 ORTHO05D000348 2.2e-27 125.6 136 55.9
C07p34000 Brassica napus HOM05D000470 ORTHO05D000348 2.2e-27 125.6 136 57.4
BolC7t43914H Brassica oleracea HOM05D000470 ORTHO05D000348 2.2e-27 125.6 136 57.4
Carub.0005s0276 Capsella rubella HOM05D000470 ORTHO05D000348 1.1e-26 123.2 136 55.9
CARHR145970 Cardamine hirsuta HOM05D000470 ORTHO05D000348 1.0e-24 116.7 139 54.7
Aa31LG2G7050 Aethionema arabicum HOM05D000470 ORTHO05D000348 6.3e-22 107.5 136 53.7
THA.LOC104801820 Tarenaya hassleriana HOM05D000470 ORTHO05D000348 2.9e-19 98.6 136 50.0
Ciclev10031664m.g Citrus clementina HOM05D000470 ORTHO05D000348 2.8e-14 82.0 134 44.8
Migut.L01188 Erythranthe guttata HOM05D000470 ORTHO05D000348 1.1e-13 80.1 137 44.5
PGR102G0383 Punica granatum HOM05D000470 ORTHO05D000348 1.4e-13 79.7 136 41.9
vmacro10427 Vaccinium macrocarpon HOM05D000470 ORTHO05D000348 3.1e-13 78.6 136 44.1
Oeu004586.1 Olea europaea HOM05D000470 ORTHO05D000348 4.1e-13 78.2 136 45.6
Cc11_g11940 Coffea canephora HOM05D000470 ORTHO05D000348 5.3e-13 77.8 136 43.4
Rhsim09G0127100 Rhododendron simsii HOM05D000470 ORTHO05D000348 1.6e-12 76.3 137 44.5
SGA_v2.0_scaffold36G14461 Striga asiatica HOM05D000470 ORTHO05D000348 1.6e-12 76.3 137 41.6
Dinv34067 Davidia involucrata HOM05D000470 ORTHO05D000348 2.0e-12 75.9 136 40.4
MSTRG.7744 Avicennia marina HOM05D000470 ORTHO05D000348 2.6e-12 75.5 135 40.7
TWI31G0545 Tripterygium wilfordii HOM05D000470 ORTHO05D000348 4.5e-12 74.7 137 41.6
CSS0034450 Camellia sinensis var. sinensis HOM05D000470 ORTHO05D000348 5.9e-12 74.3 136 41.9
Duzib251G0215 Durio zibethinus HOM05D000470 ORTHO05D000348 5.9e-12 74.3 137 42.3
MD16G1060900 Malus domestica HOM05D000470 ORTHO05D000348 5.9e-12 74.3 137 43.1
Prupe.1G287300 Prunus persica HOM05D000470 ORTHO05D000348 5.9e-12 74.3 136 42.6
TAR622G0171 Trochodendron aralioides HOM05D000470 ORTHO05D000348 1.0e-11 73.6 137 40.9
DCAR_026676 Daucus carota HOM05D000470 ORTHO05D000348 1.3e-11 73.2 135 40.7
Duzib268G1006 Durio zibethinus HOM05D000470 ORTHO05D000348 1.7e-11 72.8 137 40.9
Eucgr.B03148 Eucalyptus grandis HOM05D000470 ORTHO05D000348 1.7e-11 72.8 137 40.9
MD13G1062600 Malus domestica HOM05D000470 ORTHO05D000348 2.9e-11 72.0 137 42.3
Sc04g0007560 Simmondsia chinensis HOM05D000470 ORTHO05D000348 2.9e-11 72.0 136 42.6
QL03p074094 Quercus lobata HOM05D000470 ORTHO05D000348 5.0e-11 71.2 136 39.0
Thecc.02G330200 Theobroma cacao HOM05D000470 ORTHO05D000348 6.5e-11 70.9 137 40.1
Cpa.g.sc1.127 Carica papaya HOM05D000470 ORTHO05D000348 8.5e-11 70.5 138 42.8
Potri.008G096200 Populus trichocarpa HOM05D000470 ORTHO05D000348 1.5e-10 69.7 136 41.2
ClCG08G010430 Citrullus lanatus HOM05D000470 ORTHO05D000348 1.9e-10 69.3 133 38.3
FAN22G0715 Fragaria x ananassa HOM05D000470 ORTHO05D000348 1.9e-10 69.3 139 40.3
SalBow2G2459 Salvia bowleyana HOM05D000470 ORTHO05D000348 1.9e-10 69.3 136 39.0
CsaV3_6G033700 Cucumis sativus L. HOM05D000470 ORTHO05D000348 2.5e-10 68.9 132 38.6
Dinv16735 Davidia involucrata HOM05D000470 ORTHO05D000348 3.2e-10 68.6 136 38.2
FvH4_4g30000 Fragaria vesca HOM05D000470 ORTHO05D000348 3.2e-10 68.6 139 39.6
Gohir.A12G161100 Gossypium hirsutum HOM05D000470 ORTHO05D000348 3.2e-10 68.6 136 40.4
Actinidia13392 Actinidia chinensis HOM05D000470 ORTHO05D000348 4.2e-10 68.2 136 41.9
Potri.010G158100 Populus trichocarpa HOM05D000470 ORTHO05D000348 4.2e-10 68.2 136 40.4
Sabra10G0120100 Salix brachista HOM05D000470 ORTHO05D000348 4.2e-10 68.2 135 38.5
FAN07G1243 Fragaria x ananassa HOM05D000470 ORTHO05D000348 5.5e-10 67.8 139 39.6
ECA233G0325 Erigeron canadensis HOM05D000470 ORTHO05D000348 7.2e-10 67.4 139 40.3
Gohir.D12G164400 Gossypium hirsutum HOM05D000470 ORTHO05D000348 7.2e-10 67.4 136 39.7
Gorai.008G177000 Gossypium raimondii HOM05D000470 ORTHO05D000348 7.2e-10 67.4 136 39.7
Manes.01G027400 Manihot esculenta HOM05D000470 ORTHO05D000348 7.2e-10 67.4 140 39.3
Aqoxy3G03688 Aquilegia oxysepala HOM05D000470 ORTHO05D000348 9.4e-10 67.0 135 37.0
unitig_8.g3184 Utricularia gibba HOM05D000470 ORTHO05D000348 9.4e-10 67.0 136 39.0
COL.COLO4_27879 Corchorus olitorius HOM05D000470 ORTHO05D000348 1.6e-09 66.2 137 39.4
FAN17G0836 Fragaria x ananassa HOM05D000470 ORTHO05D000348 1.6e-09 66.2 152 36.8
Manes.05G110400 Manihot esculenta HOM05D000470 ORTHO05D000348 1.6e-09 66.2 137 40.9
RcHm_v2.0_Chr4g0438281 Rosa chinensis HOM05D000470 ORTHO05D000348 1.6e-09 66.2 137 38.7
HanXRQChr08g0211711 Helianthus annuus HOM05D000470 ORTHO05D000348 2.1e-09 65.9 143 38.5
Sed0007156 Sechium edule HOM05D000470 ORTHO05D000348 2.7e-09 65.5 133 36.8
Atru.chr11.1623 Acer truncatum HOM05D000470 ORTHO05D000348 3.6e-09 65.1 137 39.4
CANSAT64G0217 Cannabis sativa HOM05D000470 ORTHO05D000348 4.7e-09 64.7 137 38.7
GSVIVG01012222001 Vitis vinifera HOM05D000470 ORTHO05D000348 8.0e-09 63.9 137 35.8
FAN12G0013 Fragaria x ananassa HOM05D000470 ORTHO05D000348 1.0e-08 63.5 139 38.8
Lsat_1_v5_gn_8_46361 Lactuca sativa HOM05D000470 ORTHO05D000348 1.0e-08 63.5 150 37.3
Lj3A1030T107 Lonicera japonica HOM05D000470 ORTHO05D000348 1.0e-08 63.5 136 36.8
Lj6A778T63 Lonicera japonica HOM05D000470 ORTHO05D000348 1.4e-08 63.2 136 39.0
Peaxi162Scf00175g00213 Petunia axillaris HOM05D000470 ORTHO05D000348 1.4e-08 63.2 146 37.0
Glyma.02G117100 Glycine max HOM05D000470 ORTHO05D000348 2.3e-08 62.4 134 37.3
Nitab4.5_0009585g0030 Nicotiana tabacum HOM05D000470 ORTHO05D000348 2.3e-08 62.4 136 38.2
CiPaw.06G092500 Carya illinoinensis HOM05D000470 ORTHO05D000348 3.0e-08 62.0 135 37.8
PSO017G6589 Papaver somniferum HOM05D000470 ORTHO05D000348 3.0e-08 62.0 135 35.6
PSO478G2191 Papaver somniferum HOM05D000470 ORTHO05D000348 3.0e-08 62.0 135 35.6
Nitab4.5_0000231g0250 Nicotiana tabacum HOM05D000470 ORTHO05D000348 4.0e-08 61.6 136 36.8
MBI16_g11614_MAGBIO Magnolia biondii HOM05D000470 ORTHO05D000348 8.8e-08 60.5 134 38.1
Cfa008878 Carpinus fangiana HOM05D000470 ORTHO05D000348 1.1e-07 60.1 137 35.8
VMungo1215G1535 Vigna mungo HOM05D000470 ORTHO05D000348 1.1e-07 60.1 134 35.8
Haze_11906 Corylus avellana HOM05D000470 ORTHO05D000348 1.5e-07 59.7 137 35.8
Phvul.003G042200 Phaseolus vulgaris HOM05D000470 ORTHO05D000348 1.5e-07 59.7 134 35.1
Lj2g0001701 Lotus japonicus HOM05D000470 ORTHO05D000348 2.6e-07 58.9 133 36.8
Solyc05g012220.3 Solanum lycopersicum HOM05D000470 ORTHO05D000348 3.3e-07 58.5 136 34.6
arahy.Tifrunner.gnm1.ann1.FURL1J Arachis hypogaea HOM05D000470 ORTHO05D000348 4.4e-07 58.2 131 34.4
CAN.G707.2 Capsicum annuum HOM05D000470 ORTHO05D000348 4.4e-07 58.2 136 35.3
Lalb_Chr10g0098871 Lupinus albus HOM05D000470 ORTHO05D000348 4.4e-07 58.2 136 34.6
arahy.Tifrunner.gnm1.ann1.UQ7PKN Arachis hypogaea HOM05D000470 ORTHO05D000348 1.3e-06 56.6 131 34.4
Ah.02g126860 Amaranthus hybridus HOM05D000470 ORTHO05D000348 1.7e-06 56.2 142 38.0
Ca_04977_v3 Cicer arietinum L. HOM05D000470 ORTHO05D000348 1.7e-06 56.2 133 35.3
MELO3C011418.2 Cucumis melo HOM05D000470 ORTHO05D000348 2.8e-06 55.5 48 66.7
HanXRQChr09g0274071 Helianthus annuus HOM05D000470 ORTHO05D000348 2.8e-06 55.5 135 33.3
HanXRQChr09g0274461 Helianthus annuus HOM05D000470 ORTHO05D000348 2.8e-06 55.5 135 33.3
ECA232G3944 Erigeron canadensis HOM05D000470 ORTHO05D000348 3.7e-06 55.1 125 35.2
arahy.Tifrunner.gnm1.ann1.7VY84B Arachis hypogaea HOM05D000470 ORTHO05D000348 4.8e-06 54.7 136 36.0
arahy.Tifrunner.gnm1.ann1.W1VPD8 Arachis hypogaea HOM05D000470 ORTHO05D000348 4.8e-06 54.7 136 36.0
ATR0580G299 Amborella trichopoda HOM05D000470 ORTHO05D000348 6.3e-06 54.3 135 33.3
SMO364G0312 Selaginella moellendorffii HOM05D000470 ORTHO05D000348 6.3e-06 54.3 122 36.9


User provided reference genes

Program Settings