Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 1.0e-64 250.0 129 100.0
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 2.5e-63 245.4 129 99.2
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 2.5e-63 245.4 129 99.2
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 6.9e-58 227.3 129 92.2
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 2.0e-57 225.7 129 91.5
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 4.4e-52 208.0 129 86.8
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 1.2e-49 199.9 129 82.2
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 2.0e-49 199.1 129 82.9
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 4.5e-49 198.0 129 82.2
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 4.5e-49 198.0 129 82.2
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 4.5e-49 198.0 129 82.2
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 1.3e-48 196.4 129 82.9
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 2.5e-47 192.2 130 80.0
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 1.4e-45 186.4 132 78.8
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 3.0e-45 185.3 131 79.4
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 8.2e-43 177.2 131 74.8
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 1.9e-39 166.0 132 72.0
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 2.8e-35 152.1 130 67.7
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 4.8e-35 151.4 129 65.1
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 5.0e-24 114.8 90 70.0
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 1.9e-23 112.8 103 63.1
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 5.6e-23 111.3 85 71.8
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 9.5e-23 110.5 105 61.0
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 9.5e-23 110.5 93 67.7
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 9.5e-23 110.5 106 65.1
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 2.1e-22 109.4 76 72.4
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 2.1e-22 109.4 78 74.4
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 2.1e-22 109.4 76 77.6
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 2.1e-22 109.4 88 64.8
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 2.8e-22 109.0 72 77.8
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 2.8e-22 109.0 134 53.0
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 2.8e-22 109.0 87 64.4
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 3.6e-22 108.6 85 70.6
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 3.6e-22 108.6 85 70.6
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 3.6e-22 108.6 76 76.3
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 4.7e-22 108.2 76 73.7
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 8.0e-22 107.5 134 52.2
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 8.0e-22 107.5 131 52.7
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 1.0e-21 107.1 78 74.4
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 1.0e-21 107.1 104 58.7
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 1.0e-21 107.1 104 58.7
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 1.4e-21 106.7 78 70.5
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 2.3e-21 105.9 78 67.9
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 2.3e-21 105.9 76 73.7
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 3.0e-21 105.5 76 71.1
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 4.0e-21 105.1 126 53.2
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 4.0e-21 105.1 114 55.3
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 4.0e-21 105.1 76 71.1
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.2e-21 104.8 129 54.3
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 5.2e-21 104.8 103 60.2
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 6.8e-21 104.4 126 52.4
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 6.8e-21 104.4 96 61.5
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 6.8e-21 104.4 96 61.5
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 6.8e-21 104.4 96 61.5
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 6.8e-21 104.4 96 61.5
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 6.8e-21 104.4 71 77.5
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 6.8e-21 104.4 76 71.1
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 8.9e-21 104.0 103 57.3
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 8.9e-21 104.0 86 66.3
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 2.6e-20 102.4 129 48.1
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 2.6e-20 102.4 124 49.2
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 2.6e-20 102.4 135 48.1
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 3.4e-20 102.1 76 68.4
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 3.4e-20 102.1 102 52.0
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 5.7e-20 101.3 76 68.4
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 7.5e-20 100.9 76 64.5
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 7.5e-20 100.9 89 61.8
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 7.5e-20 100.9 72 72.2
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 7.5e-20 100.9 109 50.5
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 2.2e-19 99.4 88 59.1
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 2.2e-19 99.4 76 67.1
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 2.9e-19 99.0 86 59.3
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 2.9e-19 99.0 86 59.3
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 3.7e-19 98.6 108 56.5
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 3.7e-19 98.6 75 68.0
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 4.9e-19 98.2 126 54.0
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 4.9e-19 98.2 76 65.8
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 6.4e-19 97.8 75 68.0
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 8.3e-19 97.4 76 65.8
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 8.3e-19 97.4 75 66.7
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 8.3e-19 97.4 76 68.4
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.1e-18 97.1 86 61.6
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 1.4e-18 96.7 88 64.8
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 1.4e-18 96.7 76 65.8
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 1.8e-18 96.3 72 68.1
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 1.8e-18 96.3 76 64.5
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 3.2e-18 95.5 86 58.1
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 4.1e-18 95.1 76 61.8
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 4.1e-18 95.1 76 61.8
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 7.0e-18 94.4 69 72.5
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 7.0e-18 94.4 71 70.4
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 7.0e-18 94.4 76 63.2
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 9.2e-18 94.0 120 48.3
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 9.2e-18 94.0 67 70.1
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 1.6e-17 93.2 119 43.7
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 2.0e-17 92.8 76 59.2
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 2.0e-17 92.8 61 77.0
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 2.7e-17 92.4 68 66.2
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 3.5e-17 92.0 90 55.6
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 1.3e-16 90.1 82 59.8
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 1.3e-16 90.1 65 73.8
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 1.3e-16 90.1 65 73.8
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 1.3e-16 90.1 65 73.8
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 3.9e-16 88.6 103 48.5
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 2.5e-15 85.9 62 71.0
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 4.3e-15 85.1 76 53.9
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 7.3e-15 84.3 133 42.1
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 1.6e-14 83.2 76 56.6
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 1.6e-14 83.2 53 69.8
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 4.7e-14 81.6 64 64.1
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 4.7e-14 81.6 73 57.5
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 3.1e-13 79.0 89 48.3
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 5.4e-10 68.2 54 68.5
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 7.0e-10 67.8 58 63.8
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 7.0e-10 67.8 58 51.7
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 3.0e-08 62.4 85 38.8
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 2.1e-06 56.2 43 55.8


User provided reference genes

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