Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p26280 Brassica napus HOM05D006794 ORTHO05D008322 3.8e-54 214.9 137 100.0
BcaC09g48759 Brassica carinata HOM05D006794 ORTHO05D008322 3.6e-36 155.2 145 64.8
C01p46200 Brassica napus HOM05D006794 ORTHO05D008322 3.6e-36 155.2 145 64.8
BolC1t04582H Brassica oleracea HOM05D006794 ORTHO05D008322 3.6e-36 155.2 145 64.8
BraA01t03709Z Brassica rapa HOM05D006794 ORTHO05D008322 2.3e-35 152.5 103 81.6
A01p36460 Brassica napus HOM05D006794 ORTHO05D008322 6.7e-35 151.0 103 80.6
BcaB04g20803 Brassica carinata HOM05D006794 ORTHO05D008322 2.6e-34 149.1 103 79.6
Thhalv10021515m.g Eutrema salsugineum HOM05D006794 ORTHO05D008322 2.0e-31 139.4 102 75.5
BcaC01g03720 Brassica carinata HOM05D006794 ORTHO05D008322 2.6e-31 139.0 100 75.0
C03p49310 Brassica napus HOM05D006794 ORTHO05D008322 5.9e-31 137.9 100 74.0
A03p40470 Brassica napus HOM05D006794 ORTHO05D008322 1.7e-30 136.3 99 73.7
AT3G17950 Arabidopsis thaliana HOM05D006794 ORTHO05D008322 3.2e-29 132.1 103 71.8
Sp3g16080 Schrenkiella parvula HOM05D006794 ORTHO05D008322 4.2e-29 131.7 145 57.9
CARHR093280 Cardamine hirsuta HOM05D006794 ORTHO05D008322 2.7e-28 129.0 102 72.5
AL3G31120 Arabidopsis lyrata HOM05D006794 ORTHO05D008322 6.7e-27 124.4 100 69.0
Carub.0003s1768 Capsella rubella HOM05D006794 ORTHO05D008322 7.4e-26 120.9 100 71.0
BcaB04g18974 Brassica carinata HOM05D006794 ORTHO05D008322 1.3e-25 120.2 101 69.3
Aa31LG8G4820 Aethionema arabicum HOM05D006794 ORTHO05D008322 7.5e-18 94.4 86 64.0
Dinv08202 Davidia involucrata HOM05D006794 ORTHO05D008322 4.8e-17 91.7 82 67.1
ClCG04G010570 Citrullus lanatus HOM05D006794 ORTHO05D008322 3.1e-16 89.0 101 58.4
MELO3C002138.2 Cucumis melo HOM05D006794 ORTHO05D008322 9.1e-16 87.4 101 57.4
Manes.06G005000 Manihot esculenta HOM05D006794 ORTHO05D008322 1.2e-15 87.0 86 62.8
CiPaw.15G144200 Carya illinoinensis HOM05D006794 ORTHO05D008322 3.5e-15 85.5 91 56.0
QL10p030576 Quercus lobata HOM05D006794 ORTHO05D008322 1.0e-14 84.0 103 53.4
Duzib084G0148 Durio zibethinus HOM05D006794 ORTHO05D008322 1.3e-14 83.6 89 57.3
TAR622G0128 Trochodendron aralioides HOM05D006794 ORTHO05D008322 1.3e-14 83.6 87 59.8
Ca_17183_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 2.9e-14 82.4 94 56.4
Lalb_Chr22g0353521 Lupinus albus HOM05D006794 ORTHO05D008322 3.8e-14 82.0 85 57.6
CiPaw.16G095900 Carya illinoinensis HOM05D006794 ORTHO05D008322 5.0e-14 81.6 85 58.8
COL.COLO4_04996 Corchorus olitorius HOM05D006794 ORTHO05D008322 5.0e-14 81.6 93 55.9
Psat4g000080 Pisum sativum HOM05D006794 ORTHO05D008322 6.5e-14 81.3 89 58.4
Sed0024550 Sechium edule HOM05D006794 ORTHO05D008322 8.5e-14 80.9 84 58.3
Nn4g24277 Nelumbo nucifera HOM05D006794 ORTHO05D008322 1.1e-13 80.5 87 58.6
GSVIVG01008463001 Vitis vinifera HOM05D006794 ORTHO05D008322 1.1e-13 80.5 87 56.3
CSS0048798 Camellia sinensis var. sinensis HOM05D006794 ORTHO05D008322 1.5e-13 80.1 85 60.0
Phvul.002G330800 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 3.2e-13 79.0 87 56.3
THA.LOC104825595 Tarenaya hassleriana HOM05D006794 ORTHO05D008322 3.2e-13 79.0 83 57.8
Glyma.08G055100 Glycine max HOM05D006794 ORTHO05D008322 7.2e-13 77.8 86 57.0
VMungo0251G1205 Vigna mungo HOM05D006794 ORTHO05D008322 7.2e-13 77.8 87 55.2
Cfa021396 Carpinus fangiana HOM05D006794 ORTHO05D008322 9.4e-13 77.4 93 54.8
Cc04_g06140 Coffea canephora HOM05D006794 ORTHO05D008322 9.4e-13 77.4 97 53.6
Haze_18880 Corylus avellana HOM05D006794 ORTHO05D008322 1.2e-12 77.0 96 53.1
Thecc.03G058000 Theobroma cacao HOM05D006794 ORTHO05D008322 1.2e-12 77.0 108 50.9
HanXRQChr01g0012541 Helianthus annuus HOM05D006794 ORTHO05D008322 1.6e-12 76.6 91 52.7
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.6e-12 76.6 88 56.8
Ca_25344_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 2.7e-12 75.9 87 57.5
Lj2g0023485 Lotus japonicus HOM05D006794 ORTHO05D008322 2.7e-12 75.9 89 57.3
Cpa.g.sc3.383 Carica papaya HOM05D006794 ORTHO05D008322 3.6e-12 75.5 85 56.5
Lalb_Chr16g0386961 Lupinus albus HOM05D006794 ORTHO05D008322 3.6e-12 75.5 83 57.8
arahy.Tifrunner.gnm1.ann1.AT27RE Arachis hypogaea HOM05D006794 ORTHO05D008322 6.1e-12 74.7 89 55.1
arahy.Tifrunner.gnm1.ann1.PNUX28 Arachis hypogaea HOM05D006794 ORTHO05D008322 6.1e-12 74.7 89 55.1
Psat1g031080 Pisum sativum HOM05D006794 ORTHO05D008322 6.1e-12 74.7 90 55.6
FvH4_5g17460 Fragaria vesca HOM05D006794 ORTHO05D008322 8.0e-12 74.3 82 52.4
FAN18G3906 Fragaria x ananassa HOM05D006794 ORTHO05D008322 8.0e-12 74.3 82 52.4
Potri.012G045700 Populus trichocarpa HOM05D006794 ORTHO05D008322 8.0e-12 74.3 82 56.1
Hma1.2p1_0163F.1_g073020 Hydrangea macrophylla HOM05D006794 ORTHO05D008322 1.0e-11 73.9 87 54.0
Phvul.004G150000 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 1.4e-11 73.6 88 56.8
Medtr6g069830 Medicago truncatula HOM05D006794 ORTHO05D008322 1.8e-11 73.2 87 54.0
Prupe.5G234500 Prunus persica HOM05D006794 ORTHO05D008322 1.8e-11 73.2 85 51.8
RcHm_v2.0_Chr7g0178231 Rosa chinensis HOM05D006794 ORTHO05D008322 1.8e-11 73.2 82 51.2
Sed0017400 Sechium edule HOM05D000034 ORTHO05D000037 1.8e-11 73.2 84 53.6
Glyma.07G103100 Glycine max HOM05D006794 ORTHO05D008322 2.3e-11 72.8 88 56.8
Solyc03g118630.3 Solanum lycopersicum HOM05D006794 ORTHO05D008322 2.3e-11 72.8 84 54.8
Sopen03g037580 Solanum pennellii HOM05D006794 ORTHO05D008322 2.3e-11 72.8 84 54.8
Duzib068G0617 Durio zibethinus HOM05D006794 ORTHO05D008322 3.0e-11 72.4 108 50.0
MD06G1228000 Malus domestica HOM05D006794 ORTHO05D008322 3.0e-11 72.4 85 51.8
Sabra15G0031400 Salix brachista HOM05D006794 ORTHO05D008322 3.0e-11 72.4 82 57.3
TPR.G8635 Trifolium pratense HOM05D006794 ORTHO05D008322 3.0e-11 72.4 91 54.9
TWI81G0550 Tripterygium wilfordii HOM05D006794 ORTHO05D008322 3.0e-11 72.4 90 55.6
VMungo0464G2014 Vigna mungo HOM05D006794 ORTHO05D008322 3.0e-11 72.4 88 55.7
Glyma.09G174700 Glycine max HOM05D006794 ORTHO05D008322 4.0e-11 72.0 87 55.2
Gohir.A12G269600 Gossypium hirsutum HOM05D006794 ORTHO05D008322 5.2e-11 71.6 110 47.3
Gorai.008G290400 Gossypium raimondii HOM05D006794 ORTHO05D008322 5.2e-11 71.6 110 47.3
MD14G1237200 Malus domestica HOM05D006794 ORTHO05D008322 5.2e-11 71.6 80 52.5
PGR083G0475 Punica granatum HOM05D006794 ORTHO05D008322 6.8e-11 71.2 89 53.9
Sabra12G0031800 Salix brachista HOM05D006794 ORTHO05D008322 6.8e-11 71.2 82 54.9
Atru.chr9.1672 Acer truncatum HOM05D006794 ORTHO05D008322 8.8e-11 70.9 93 48.4
PSO210G4985 Papaver somniferum HOM05D006794 ORTHO05D008322 8.8e-11 70.9 102 48.0
FAN13G2800 Fragaria x ananassa HOM05D006794 ORTHO05D008322 1.2e-10 70.5 98 48.0
Lsat_1_v5_gn_5_175480 Lactuca sativa HOM05D006794 ORTHO05D008322 1.2e-10 70.5 86 52.3
PSO832G1236 Papaver somniferum HOM05D006794 ORTHO05D008322 2.0e-10 69.7 102 47.1
arahy.Tifrunner.gnm1.ann1.KQ26AL Arachis hypogaea HOM05D006794 ORTHO05D008322 2.6e-10 69.3 84 53.6
arahy.Tifrunner.gnm1.ann1.P2R0G6 Arachis hypogaea HOM05D006794 ORTHO05D008322 2.6e-10 69.3 84 53.6
Eucgr.B00988 Eucalyptus grandis HOM05D006794 ORTHO05D008322 2.6e-10 69.3 83 54.2
Gohir.D12G270100 Gossypium hirsutum HOM05D006794 ORTHO05D008322 2.6e-10 69.3 110 46.4
Peaxi162Scf00314g00315 Petunia axillaris HOM05D006794 ORTHO05D008322 2.6e-10 69.3 87 54.0
CANSAT80G0659 Cannabis sativa HOM05D006794 ORTHO05D008322 4.4e-10 68.6 101 47.5
CANSAT80G2635 Cannabis sativa HOM05D006794 ORTHO05D008322 4.4e-10 68.6 101 47.5
Nitab4.5_0001264g0020 Nicotiana tabacum HOM05D006794 ORTHO05D008322 7.5e-10 67.8 88 51.1
Nitab4.5_0010223g0030 Nicotiana tabacum HOM05D006794 ORTHO05D008322 7.5e-10 67.8 90 52.2
Oeu046160.1 Olea europaea HOM05D006794 ORTHO05D008322 7.5e-10 67.8 99 52.5
PGSC0003DMG400005675 Solanum tuberosum HOM05D006794 ORTHO05D008322 7.5e-10 67.8 87 52.9
ECA248G0187 Erigeron canadensis HOM05D006794 ORTHO05D008322 1.7e-09 66.6 93 47.3
vmacro16409 Vaccinium macrocarpon HOM05D006794 ORTHO05D008322 2.2e-09 66.2 82 51.2
Potri.015G036900 Populus trichocarpa HOM05D006794 ORTHO05D008322 2.8e-09 65.9 84 54.8
MBI19_g22477_MAGBIO Magnolia biondii HOM05D006794 ORTHO05D008322 3.7e-09 65.5 95 46.3
Ciclev10009814m.g Citrus clementina HOM05D006794 ORTHO05D008322 3.1e-08 62.4 86 44.2
FAN08G0189 Fragaria x ananassa HOM05D006794 ORTHO05D008322 3.1e-08 62.4 82 45.1
Lj4g0014763 Lotus japonicus HOM05D006794 ORTHO05D008322 5.4e-08 61.6 78 51.3
FAN04G0930 Fragaria x ananassa HOM05D006794 ORTHO05D008322 1.2e-07 60.5 82 45.1
DCAR_013026 Daucus carota HOM05D006794 ORTHO05D008322 3.5e-07 58.9 88 47.7


User provided reference genes

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