Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 5.3e-122 441.0 223 100.0
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 1.5e-113 412.9 230 94.8
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 1.1e-98 363.6 206 92.2
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 3.1e-98 362.1 205 93.2
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 1.5e-92 343.2 204 88.7
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 1.5e-92 343.2 204 88.7
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 2.0e-92 342.8 204 89.2
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 4.4e-92 341.7 204 88.2
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 7.5e-92 340.9 204 88.7
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 7.5e-92 340.9 204 88.7
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 2.8e-91 339.0 202 88.6
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 6.3e-91 337.8 187 94.1
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 2.0e-89 332.8 204 86.8
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 2.0e-89 332.8 204 86.8
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 1.7e-88 329.7 203 85.7
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 2.9e-88 328.9 204 85.3
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 6.1e-86 321.2 206 81.6
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 2.6e-84 315.8 200 85.5
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 9.1e-82 307.4 186 88.2
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 8.8e-77 290.8 209 73.7
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.2e-60 237.3 199 63.8
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 6.4e-59 231.5 212 59.9
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 6.4e-59 231.5 212 59.9
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 8.3e-59 231.1 199 61.3
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 8.3e-59 231.1 214 61.2
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 1.1e-58 230.7 223 57.8
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 1.1e-58 230.7 208 60.6
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.9e-58 229.9 200 63.0
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 1.9e-58 229.9 207 61.4
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 3.2e-58 229.2 211 59.2
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 4.1e-58 228.8 211 60.2
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 4.1e-58 228.8 206 61.7
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 5.4e-58 228.4 207 60.4
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 7.0e-58 228.0 205 62.0
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 1.2e-57 227.3 221 61.1
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.6e-57 226.9 202 61.4
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 1.6e-57 226.9 207 60.4
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.7e-57 226.1 157 73.2
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 2.7e-57 226.1 209 61.2
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 3.5e-57 225.7 209 62.2
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 3.5e-57 225.7 207 59.9
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 4.6e-57 225.3 210 61.0
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 4.6e-57 225.3 218 58.7
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 6.0e-57 224.9 224 57.1
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 7.8e-57 224.6 206 58.3
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 1.3e-56 223.8 137 80.3
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 1.3e-56 223.8 135 80.7
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 1.7e-56 223.4 214 57.9
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.3e-56 223.0 221 58.8
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 2.3e-56 223.0 202 61.4
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 3.9e-56 222.2 199 61.3
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 3.9e-56 222.2 217 59.4
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 5.0e-56 221.9 205 61.5
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 6.6e-56 221.5 208 58.7
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 8.6e-56 221.1 209 58.4
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 1.1e-55 220.7 199 60.8
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 1.1e-55 220.7 135 80.7
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 1.9e-55 219.9 209 58.9
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 2.5e-55 219.5 137 77.4
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 4.3e-55 218.8 219 58.0
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 5.6e-55 218.4 132 81.8
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 5.6e-55 218.4 132 81.8
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 5.6e-55 218.4 209 58.9
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 7.3e-55 218.0 139 78.4
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 7.3e-55 218.0 216 59.3
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.2e-54 217.2 137 77.4
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 1.2e-54 217.2 137 78.1
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 1.6e-54 216.9 227 54.2
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 3.6e-54 215.7 212 59.0
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 4.7e-54 215.3 210 58.1
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 4.7e-54 215.3 135 80.0
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 6.2e-54 214.9 130 82.3
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 8.1e-54 214.5 216 55.1
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 8.1e-54 214.5 227 55.5
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.1e-53 214.2 215 56.7
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.8e-53 213.4 215 55.3
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 4.0e-53 212.2 138 76.1
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 4.0e-53 212.2 129 83.7
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 4.0e-53 212.2 228 54.8
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 4.0e-53 212.2 173 63.6
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 5.2e-53 211.8 215 56.7
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 6.8e-53 211.5 150 70.7
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 8.9e-53 211.1 135 78.5
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.5e-52 210.3 217 54.8
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.0e-52 209.9 219 53.9
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 5.8e-52 208.4 226 55.3
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 9.8e-52 207.6 243 51.9
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 1.7e-51 206.8 203 58.6
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 1.7e-51 206.8 132 75.8
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.7e-51 205.7 218 54.1
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 4.9e-51 205.3 265 49.1
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 1.1e-50 204.1 136 77.9
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 7.1e-50 201.4 191 57.1
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 9.2e-50 201.1 134 76.9
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 1.2e-49 200.7 199 55.3
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 1.2e-49 200.7 224 53.1
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 1.6e-49 200.3 189 59.8
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 2.7e-49 199.5 196 58.2
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 1.0e-48 197.6 175 58.9
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 1.7e-48 196.8 148 67.6
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 5.1e-48 195.3 165 62.4
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 5.1e-48 195.3 148 68.9
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 6.6e-48 194.9 188 58.0
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 8.6e-48 194.5 119 77.3
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 1.1e-47 194.1 130 70.8
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 4.3e-47 192.2 132 72.7
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 5.6e-47 191.8 210 53.3
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 7.3e-47 191.4 126 73.8
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 4.7e-46 188.7 119 75.6
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 2.3e-45 186.4 200 53.5
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.1e-45 186.0 286 42.0
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 3.1e-45 186.0 137 67.9
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 5.2e-45 185.3 206 53.9
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 5.2e-45 185.3 145 65.5
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 6.8e-45 184.9 212 51.4
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 8.9e-45 184.5 142 62.0
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 3.4e-44 182.6 148 68.2
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.3e-43 180.6 199 51.3
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.2e-43 179.9 199 49.2
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 4.1e-42 175.6 151 61.6
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 6.0e-41 171.8 198 53.0
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 1.0e-40 171.0 223 48.9
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.3e-40 170.6 141 63.1
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 8.6e-40 167.9 141 61.0
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 3.3e-39 166.0 155 56.1
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 4.3e-39 165.6 179 54.2
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 5.6e-39 165.2 136 65.4
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 2.8e-38 162.9 133 61.7
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 5.2e-37 158.7 117 68.4
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 8.9e-37 157.9 165 53.9
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.2e-36 157.5 136 62.5
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 2.0e-36 156.8 190 50.5
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 7.6e-36 154.8 129 58.9
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 2.2e-35 153.3 102 77.5
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 4.9e-35 152.1 135 54.8
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 8.4e-35 151.4 134 61.9
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 1.4e-34 150.6 177 49.2
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 1.4e-34 150.6 167 55.1
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.4e-34 150.6 165 50.9
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 2.3e-32 143.3 89 76.4
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.6e-30 136.0 164 51.2
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 2.4e-29 133.3 88 72.7
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 1.7e-27 127.1 194 42.8
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 2.1e-25 120.2 131 48.9
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.3e-22 110.9 137 46.0
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 4.2e-18 95.9 167 35.3
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 1.3e-16 90.9 113 42.5
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 1.3e-16 90.9 61 75.4
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 5.6e-15 85.5 87 54.0
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 9.0e-13 78.2 73 56.2
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 9.3e-10 68.2 39 82.1
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 1.1e-07 61.2 40 72.5


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