Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 1.2e-101 373.2 198 100.0
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 3.5e-101 371.7 198 99.5
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 5.1e-100 367.9 198 98.0
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 4.9e-95 351.3 202 93.6
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 4.9e-95 351.3 202 93.6
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 1.4e-89 333.2 202 87.1
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 1.4e-73 280.0 201 76.1
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 6.9e-73 277.7 203 77.3
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 3.4e-72 275.4 202 75.7
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 3.8e-71 271.9 202 75.2
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 6.7e-68 261.2 205 73.7
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 1.2e-64 250.4 200 68.5
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 1.1e-62 243.8 203 70.4
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 4.2e-62 241.9 203 70.0
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 6.0e-61 238.0 203 68.0
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 2.5e-54 216.1 209 60.8
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 4.2e-54 215.3 203 59.1
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 9.3e-54 214.2 198 61.6
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 1.5e-51 206.8 202 58.9
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 1.1e-46 190.7 215 52.1
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.7e-23 113.6 180 39.4
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 9.4e-22 107.8 181 40.3
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.2e-21 107.5 180 38.9
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 2.7e-21 106.3 180 39.4
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 4.7e-21 105.5 160 42.5
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.0e-20 104.4 165 40.0
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 1.8e-20 103.6 163 40.5
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 2.3e-20 103.2 163 43.6
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 3.4e-19 99.4 151 42.4
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 7.5e-19 98.2 164 40.9
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 7.5e-19 98.2 156 38.5
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 1.7e-18 97.1 158 39.2
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 2.8e-18 96.3 184 35.3
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 2.8e-18 96.3 162 40.1
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 3.7e-18 95.9 203 34.5
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 4.8e-18 95.5 156 42.3
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 6.3e-18 95.1 160 40.0
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 8.3e-18 94.7 208 32.7
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.8e-17 93.6 152 38.2
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 1.8e-17 93.6 187 38.0
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 5.4e-17 92.0 150 39.3
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 7.0e-17 91.7 202 34.2
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 1.6e-16 90.5 211 35.1
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 1.6e-16 90.5 179 36.3
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 3.5e-16 89.4 192 35.4
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 3.5e-16 89.4 174 34.5
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 4.5e-16 89.0 174 34.5
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 4.5e-16 89.0 165 35.8
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 5.9e-16 88.6 162 36.4
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 7.7e-16 88.2 167 37.7
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 7.7e-16 88.2 202 32.7
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.7e-15 87.0 161 34.8
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 2.2e-15 86.7 195 35.4
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 2.9e-15 86.3 181 33.7
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 3.8e-15 85.9 178 34.3
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 5.0e-15 85.5 224 32.1
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 6.5e-15 85.1 187 34.2
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 6.5e-15 85.1 151 35.8
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.5e-15 85.1 157 35.0
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 4.2e-14 82.4 138 37.7
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 7.2e-14 81.6 174 34.5
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 9.4e-14 81.3 157 33.8
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 9.4e-14 81.3 148 39.2
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 2.7e-13 79.7 148 36.5
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 3.6e-13 79.3 182 35.2
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 4.7e-13 79.0 211 31.8
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 6.1e-13 78.6 195 32.3
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 1.0e-12 77.8 162 36.4
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 1.0e-12 77.8 167 33.5
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 4.0e-12 75.9 205 29.3
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 5.2e-12 75.5 83 43.4
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 8.8e-12 74.7 164 32.3
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 8.8e-12 74.7 157 38.9
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 1.2e-11 74.3 142 33.8
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 1.2e-11 74.3 182 34.1
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 2.0e-11 73.6 143 35.0
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 2.6e-11 73.2 206 32.5
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 2.6e-11 73.2 159 32.7
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 3.4e-11 72.8 168 33.3
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 3.4e-11 72.8 213 31.0
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 4.4e-11 72.4 163 34.4
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 5.7e-11 72.0 153 37.9
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 9.8e-11 71.2 186 28.0
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 1.3e-10 70.9 129 34.9
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 1.7e-10 70.5 126 34.1
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 2.2e-10 70.1 61 52.5
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 2.2e-10 70.1 180 31.7
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 2.8e-10 69.7 121 34.7
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 3.7e-10 69.3 194 31.4
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 4.9e-10 68.9 187 34.2
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 6.3e-10 68.6 148 31.1
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 6.3e-10 68.6 121 34.7
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 6.3e-10 68.6 161 28.0
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 8.3e-10 68.2 142 35.2
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 8.3e-10 68.2 173 33.5
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 1.8e-09 67.0 185 30.8
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 3.1e-09 66.2 155 31.0
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 4.1e-09 65.9 153 34.0
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 4.1e-09 65.9 78 41.0
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 7.0e-09 65.1 103 41.7
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 1.6e-08 63.9 62 51.6
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 1.6e-08 63.9 62 51.6
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 2.0e-08 63.5 144 31.2
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 2.7e-08 63.2 99 41.4
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 2.7e-08 63.2 122 38.5
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 3.5e-08 62.8 151 29.1
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 4.5e-08 62.4 104 34.6
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 5.9e-08 62.0 162 28.4
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 7.7e-08 61.6 78 41.0
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 8.6e-07 58.2 97 33.0


User provided reference genes

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