Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p25550 Brassica napus HOM05D007313 ORTHO05D005299 1.7e-79 299.3 149 100.0
BolC5t31282H Brassica oleracea HOM05D007313 ORTHO05D005299 4.8e-79 297.7 149 99.3
BcaC05g26505 Brassica carinata HOM05D007313 ORTHO05D005299 2.6e-32 142.5 71 98.6
A09p38970 Brassica napus HOM05D007313 ORTHO05D005299 2.0e-24 116.3 69 82.6
BcaC05g26701 Brassica carinata HOM05D007313 ORTHO05D005299 7.1e-22 107.8 68 80.9
BcaB03g14014 Brassica carinata HOM05D007313 ORTHO05D005299 1.7e-20 103.2 69 73.9
A07p12350 Brassica napus HOM05D007313 ORTHO05D005299 5.1e-20 101.7 69 73.9
BraA07t29016Z Brassica rapa HOM05D007313 ORTHO05D005299 5.1e-20 101.7 69 73.9
BcaC06g35248 Brassica carinata HOM05D007313 ORTHO05D005299 4.3e-19 98.6 69 72.5
C07p18250 Brassica napus HOM05D007313 ORTHO05D005299 4.3e-19 98.6 69 72.5
BolC7t42335H Brassica oleracea HOM05D007313 ORTHO05D005299 4.3e-19 98.6 69 72.5
BcaB03g12049 Brassica carinata HOM05D007313 ORTHO05D005299 6.2e-18 94.7 74 68.9
Sp1g23170 Schrenkiella parvula HOM05D007313 ORTHO05D005299 3.1e-17 92.4 72 69.4
A08p26710 Brassica napus HOM05D007313 ORTHO05D005299 1.7e-15 86.7 74 64.9
BraA08t34617Z Brassica rapa HOM05D007313 ORTHO05D005299 1.7e-15 86.7 74 64.9
AL1G40310 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 4.9e-15 85.1 72 65.3
Carub.0001s2549 Capsella rubella HOM05D007313 ORTHO05D005299 1.9e-14 83.2 71 64.8
CARHR026470 Cardamine hirsuta HOM05D007313 ORTHO05D005299 2.4e-14 82.8 72 63.9
Aa31LG7G9440 Aethionema arabicum HOM05D007313 ORTHO05D005299 5.4e-14 81.6 66 65.2
AT1G24600 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 2.3e-12 76.3 72 61.1
THA.LOC104825566 Tarenaya hassleriana HOM05D007313 ORTHO05D005299 2.1e-10 69.7 56 66.1
BcaC03g14888 Brassica carinata HOM05D007313 ORTHO05D005299 4.8e-10 68.6 71 59.2
C02p23620 Brassica napus HOM05D007313 ORTHO05D005299 4.8e-10 68.6 71 59.2
BolC2t08492H Brassica oleracea HOM05D007313 ORTHO05D005299 4.8e-10 68.6 71 59.2
BcaB05g24323 Brassica carinata HOM05D007313 ORTHO05D005299 6.2e-10 68.2 71 59.2
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 1.8e-09 66.6 69 58.0
A02p14560 Brassica napus HOM05D007313 ORTHO05D005299 2.4e-09 66.2 76 55.3
BraA02t06526Z Brassica rapa HOM05D007313 ORTHO05D005299 2.4e-09 66.2 76 55.3
BraA07t31073Z Brassica rapa HOM05D007313 ORTHO05D005299 2.4e-09 66.2 76 56.6
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 2.4e-09 66.2 65 60.0
BcaC08g46215 Brassica carinata HOM05D007313 ORTHO05D005299 5.3e-09 65.1 71 59.2
BolC6t39221H Brassica oleracea HOM05D007313 ORTHO05D005299 5.3e-09 65.1 71 59.2
BcaB03g15385 Brassica carinata HOM05D007313 ORTHO05D005299 6.9e-09 64.7 64 59.4
A07p34460 Brassica napus HOM05D007313 ORTHO05D005299 6.9e-09 64.7 66 59.1
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 6.9e-09 64.7 82 51.2
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 6.9e-09 64.7 82 51.2
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 6.9e-09 64.7 82 51.2
A07p32280 Brassica napus HOM05D007313 ORTHO05D005299 1.5e-08 63.5 61 62.3
BraA07t30853Z Brassica rapa HOM05D007313 ORTHO05D005299 1.5e-08 63.5 61 62.3
BcaB03g15149 Brassica carinata HOM05D007313 ORTHO05D005299 2.0e-08 63.2 76 55.3
BcaC08g46017 Brassica carinata HOM05D007313 ORTHO05D005299 2.0e-08 63.2 61 62.3
C06p38120 Brassica napus HOM05D007313 ORTHO05D005299 2.0e-08 63.2 61 62.3
BolC6t38909H Brassica oleracea HOM05D007313 ORTHO05D005299 2.0e-08 63.2 61 62.3
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.0e-08 63.2 89 46.1
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 2.0e-08 63.2 65 58.5
Sp5g22920 Schrenkiella parvula HOM05D007313 ORTHO05D005299 2.6e-08 62.8 71 56.3
AT1G67920 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 3.4e-08 62.4 69 56.5
Thhalv10019740m.g Eutrema salsugineum HOM05D007313 ORTHO05D005299 4.5e-08 62.0 71 56.3
Carub.0002s1441 Capsella rubella HOM05D007313 ORTHO05D005299 5.8e-08 61.6 61 60.7
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 5.8e-08 61.6 58 62.1
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 5.8e-08 61.6 58 62.1
AL2G26720 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 7.6e-08 61.2 69 55.1
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 9.9e-08 60.8 66 56.1
CARHR060560 Cardamine hirsuta HOM05D007313 ORTHO05D005299 1.7e-07 60.1 76 51.3
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 2.9e-07 59.3 73 50.7
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 2.9e-07 59.3 74 52.7
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 3.8e-07 58.9 65 55.4
TAR629G3106 Trochodendron aralioides HOM05D007313 ORTHO05D005299 4.9e-07 58.5 75 48.0
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 4.2e-06 55.5 76 47.4
FvH4_5g17640 Fragaria vesca HOM05D008500 ORTHO05D005299 7.1e-06 54.7 80 48.8
FAN18G0107 Fragaria x ananassa HOM05D008500 ORTHO05D005299 9.3e-06 54.3 80 48.8


User provided reference genes

Program Settings