Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p39320 Brassica napus HOM05D007757 ORTHO05D009619 2.1e-41 172.2 103 100.0
C05p25050 Brassica napus HOM05D007757 ORTHO05D009619 2.1e-41 172.2 103 100.0
BraA09t39435Z Brassica rapa HOM05D007757 ORTHO05D009619 1.4e-40 169.5 103 97.1
BolC5t31238H Brassica oleracea HOM05D007757 ORTHO05D009619 2.0e-39 165.6 104 98.1
BcaC05g26671 Brassica carinata HOM05D007757 ORTHO05D009619 3.2e-37 158.3 103 92.2
BcaC05g26463 Brassica carinata HOM05D007757 ORTHO05D009619 1.5e-34 149.4 103 89.3
BcaB03g14042 Brassica carinata HOM05D007757 ORTHO05D009619 9.5e-34 146.7 103 90.3
Sp1g22790 Schrenkiella parvula HOM05D007757 ORTHO05D009619 8.1e-25 117.1 57 87.7
BcaC06g35205 Brassica carinata HOM05D007757 ORTHO05D009619 4.0e-24 114.8 102 72.5
C07p18700 Brassica napus HOM05D007757 ORTHO05D009619 4.0e-24 114.8 102 72.5
BolC7t42380H Brassica oleracea HOM05D007757 ORTHO05D009619 4.0e-24 114.8 102 72.5
A07p12600 Brassica napus HOM05D007757 ORTHO05D009619 1.5e-23 112.8 102 72.5
BraA07t29038Z Brassica rapa HOM05D007757 ORTHO05D009619 1.5e-23 112.8 102 72.5
AT1G25422 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 3.8e-22 108.2 58 82.8
CARHR026040 Cardamine hirsuta HOM05D007757 ORTHO05D009619 3.2e-21 105.1 103 70.9
AL1G39890 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 1.6e-20 102.8 103 68.9
Carub.0001s2507 Capsella rubella HOM05D007757 ORTHO05D009619 8.7e-19 97.1 59 76.3
THA.LOC104821934 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 3.0e-11 72.0 56 58.9
THA.LOC104800008 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 3.3e-10 68.6 44 63.6
CARHR061280 Cardamine hirsuta HOM05D007757 ORTHO05D009619 1.6e-09 66.2 44 63.6
AL2G27370 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 3.6e-09 65.1 44 61.4
AT1G68500 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 4.8e-09 64.7 48 58.3
Carub.0002s1501 Capsella rubella HOM05D007757 ORTHO05D009619 6.2e-09 64.3 42 61.9
Sp5g23570 Schrenkiella parvula HOM05D007757 ORTHO05D009619 1.4e-08 63.2 44 61.4
Thhalv10019384m.g Eutrema salsugineum HOM05D007757 ORTHO05D009619 2.4e-08 62.4 44 59.1
BcaC08g46271 Brassica carinata HOM05D007757 ORTHO05D009619 3.1e-08 62.0 44 59.1
BcaB03g15824 Brassica carinata HOM05D007757 ORTHO05D009619 6.9e-08 60.8 44 56.8
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 6.9e-08 60.8 42 52.4
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 9.0e-08 60.5 41 56.1
BcaB05g24389 Brassica carinata HOM05D007757 ORTHO05D009619 1.2e-07 60.1 44 56.8
A02p15100 Brassica napus HOM05D007757 ORTHO05D009619 1.2e-07 60.1 44 56.8
BraA02t06576Z Brassica rapa HOM05D007757 ORTHO05D009619 1.2e-07 60.1 44 56.8
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 1.5e-07 59.7 47 48.9
BcaC03g14960 Brassica carinata HOM05D007757 ORTHO05D009619 3.4e-07 58.5 44 54.5
C02p24780 Brassica napus HOM05D007757 ORTHO05D009619 3.4e-07 58.5 44 54.5
BolC2t08570H Brassica oleracea HOM05D007757 ORTHO05D009619 3.4e-07 58.5 44 54.5
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 3.4e-07 58.5 41 51.2
MD16G1042600 Malus domestica HOM05D007757 ORTHO05D009619 4.5e-07 58.2 47 46.8
A07p34900 Brassica napus HOM05D007757 ORTHO05D009619 5.8e-07 57.8 102 39.2
C06p41430 Brassica napus HOM05D007757 ORTHO05D009619 5.8e-07 57.8 102 39.2
BolC6t39280H Brassica oleracea HOM05D007757 ORTHO05D009619 5.8e-07 57.8 102 39.2
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 7.6e-07 57.4 43 48.8
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 1.3e-06 56.6 40 50.0
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 2.2e-06 55.8 40 50.0
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 6.4e-06 54.3 40 50.0


User provided reference genes

Program Settings