Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 7.0e-187 657.1 331 100.0
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 5.9e-186 654.1 331 99.4
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.5e-184 649.4 331 98.8
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 1.7e-180 636.0 331 97.0
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 2.4e-179 632.1 331 96.1
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 9.1e-171 603.6 331 92.1
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.3e-169 599.7 331 91.5
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 3.8e-169 598.2 333 90.7
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 4.2e-168 594.7 331 90.0
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 8.9e-166 587.0 331 89.7
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 7.0e-163 577.4 332 88.0
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 5.8e-157 557.8 331 86.1
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.3e-153 546.6 332 81.9
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.9e-136 489.6 326 75.5
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 1.9e-136 489.6 322 74.5
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 9.6e-136 487.3 319 75.9
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 2.1e-135 486.1 332 72.9
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 3.6e-135 485.3 318 74.8
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 2.6e-133 479.2 332 72.9
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.3e-132 476.9 320 74.4
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 1.7e-132 476.5 332 72.6
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 2.2e-132 476.1 324 73.1
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 3.8e-132 475.3 328 72.0
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 8.4e-132 474.2 323 73.1
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 5.4e-131 471.5 320 73.4
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 9.3e-131 470.7 323 71.5
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.2e-130 470.3 320 72.8
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.2e-130 470.3 320 72.8
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.2e-130 470.3 320 73.1
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 1.6e-130 469.9 329 72.6
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 7.8e-130 467.6 320 72.5
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 7.8e-130 467.6 322 73.3
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.0e-129 467.2 325 72.0
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 1.3e-129 466.8 328 70.4
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.7e-129 466.5 323 71.5
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.7e-129 466.5 321 72.9
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 5.1e-129 464.9 329 71.7
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 8.7e-129 464.2 323 71.2
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 8.7e-129 464.2 331 71.0
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.1e-128 463.8 331 70.7
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.5e-128 463.4 324 72.2
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 2.5e-128 462.6 320 72.2
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 2.5e-128 462.6 322 72.4
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 5.6e-128 461.5 329 69.3
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 5.6e-128 461.5 331 70.4
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 2.8e-127 459.1 318 73.0
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 4.8e-127 458.4 322 70.2
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 6.2e-127 458.0 317 71.0
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 1.1e-126 457.2 322 71.7
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 1.1e-126 457.2 322 71.4
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 1.4e-126 456.8 319 70.2
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 1.8e-126 456.4 323 70.3
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 2.4e-126 456.1 320 70.9
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 3.1e-126 455.7 322 71.4
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 4.0e-126 455.3 343 67.1
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 2.6e-125 452.6 316 69.6
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 3.4e-125 452.2 321 69.5
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 4.4e-125 451.8 335 68.7
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 5.8e-125 451.4 335 68.4
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 9.9e-125 450.7 312 70.8
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 2.2e-124 449.5 328 69.8
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 6.4e-124 448.0 317 70.0
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.4e-123 446.8 336 68.2
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 2.4e-123 446.0 322 68.6
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 3.5e-122 442.2 331 68.3
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 3.5e-122 442.2 322 67.7
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 6.0e-122 441.4 322 67.7
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.3e-121 440.3 318 68.9
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 3.3e-120 435.6 333 67.3
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 1.1e-118 430.6 318 67.6
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.1e-118 430.6 319 69.3
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 2.4e-118 429.5 309 68.3
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.5e-117 426.8 331 67.1
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 3.4e-117 425.6 333 64.6
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.9e-116 421.8 281 73.7
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.4e-115 420.2 321 67.0
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 6.0e-114 414.8 319 67.7
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.0e-113 412.5 330 64.8
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 5.1e-113 411.8 281 71.9
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.0e-108 397.5 327 61.8
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 1.3e-108 397.1 325 63.4
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.9e-108 396.0 309 66.3
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.1e-107 394.0 327 64.2
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.7e-100 370.2 431 48.7
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.4e-99 367.1 270 68.5
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.4e-99 367.1 321 59.8
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 1.2e-98 364.0 348 57.5
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 2.1e-98 363.2 372 55.4
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 1.9e-96 356.7 319 59.6
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 3.3e-96 355.9 320 57.5
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.0e-93 346.7 324 55.9
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 2.9e-92 342.8 352 53.7
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 1.7e-87 327.0 317 56.2
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 1.1e-80 304.3 317 52.4
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 6.3e-79 298.5 224 68.8
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.1e-75 287.7 207 69.6
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 9.1e-70 268.1 294 53.1
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 8.8e-65 251.5 279 52.0
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 2.6e-56 223.4 353 40.2
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 6.6e-52 208.8 303 40.3
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.2e-47 193.7 185 57.3
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 3.2e-46 189.9 167 59.3
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 3.6e-42 176.4 184 53.8
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.8e-40 168.3 104 76.9
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.3e-39 167.9 119 64.7
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.6e-34 151.0 108 65.7
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.9e-19 100.9 229 34.1
AL2G14220 Arabidopsis lyrata HOM05D011085 ORTHO05D031413 3.2e-14 83.6 76 60.5
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 4.3e-11 73.2 83 50.6
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 5.6e-11 72.8 52 61.5
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 9.9e-08 62.0 78 48.7
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 1.4e-06 58.2 51 52.9


User provided reference genes

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