Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p24340 Brassica napus HOM05D052559 ORTHO05D040828 5.2e-113 411.0 196 100.0
BolC5t31167H Brassica oleracea HOM05D052559 ORTHO05D040828 7.8e-77 290.8 163 89.6
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 1.6e-21 107.1 198 40.4
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 2.7e-21 106.3 198 40.4
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 6.0e-21 105.1 198 40.4
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.1e-19 100.9 193 40.4
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.1e-19 100.9 193 40.4
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.5e-19 100.5 193 39.9
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 2.5e-19 99.8 193 39.9
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 3.1e-17 92.8 196 38.3
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 7.7e-16 88.2 197 37.1
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 6.5e-15 85.1 196 37.8
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 1.4e-14 84.0 196 37.2
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 1.4e-14 84.0 196 37.8
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 5.5e-14 82.0 200 35.0
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 2.7e-13 79.7 41 90.2
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 2.2e-10 70.1 197 33.0
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 8.2e-10 68.2 99 48.5


User provided reference genes

Program Settings