Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p22840 Brassica napus HOM05D000693 ORTHO05D100859 4.6e-38 160.6 75 100.0
BolC8t51178H Brassica oleracea HOM05D000693 ORTHO05D002444 6.1e-14 80.5 50 76.0
BcaB07g33961 Brassica carinata HOM05D000693 ORTHO05D002444 5.2e-13 77.4 48 75.0
BraA09t40743Z Brassica rapa HOM05D000693 ORTHO05D002444 5.2e-13 77.4 48 75.0
C08p35950 Brassica napus HOM05D000693 ORTHO05D002444 6.8e-13 77.0 48 75.0
BcaC07g40615 Brassica carinata HOM05D000693 ORTHO05D002444 2.0e-12 75.5 48 72.9
A09p53180 Brassica napus HOM05D000693 ORTHO05D002444 2.0e-12 75.5 48 72.9
A09p35540 Brassica napus HOM05D000693 ORTHO05D002444 1.4e-10 69.3 48 72.9
BraA09t39080Z Brassica rapa HOM05D000693 ORTHO05D002444 1.4e-10 69.3 48 72.9
BcaC05g26270 Brassica carinata HOM05D000693 ORTHO05D002444 1.6e-09 65.9 48 66.7
BolC5t30981H Brassica oleracea HOM05D000693 ORTHO05D002444 1.6e-09 65.9 48 66.7
BcaB07g32728 Brassica carinata HOM05D000693 ORTHO05D002444 2.7e-09 65.1 48 68.8
BcaC05g27098 Brassica carinata HOM05D000693 ORTHO05D002444 2.7e-09 65.1 39 79.5
BcaC05g27099 Brassica carinata HOM05D000693 ORTHO05D002444 2.7e-09 65.1 39 79.5
C05p29840 Brassica napus HOM05D000693 ORTHO05D002444 2.7e-09 65.1 39 79.5
BolC5t31715H Brassica oleracea HOM05D000693 ORTHO05D002444 2.7e-09 65.1 39 79.5
BcaB07g32342 Brassica carinata HOM05D000693 ORTHO05D002444 4.5e-09 64.3 48 62.5
C05p22820 Brassica napus HOM05D000693 ORTHO05D002444 4.5e-09 64.3 48 64.6
A09p41160 Brassica napus HOM05D000693 ORTHO05D002444 1.3e-08 62.8 48 62.5
BraA09t39608Z Brassica rapa HOM05D000693 ORTHO05D002444 1.3e-08 62.8 48 62.5
AL1G37270 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 8.5e-08 60.1 39 71.8
Carub.0001s2305 Capsella rubella HOM05D000693 ORTHO05D002444 9.4e-07 56.6 39 69.2
CARHR023940 Cardamine hirsuta HOM05D000693 ORTHO05D002444 1.2e-06 56.2 36 72.2
AT1G23510 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 1.6e-06 55.8 39 66.7
Sp1g20940 Schrenkiella parvula HOM05D000693 ORTHO05D002444 2.1e-06 55.5 49 59.2


User provided reference genes

Program Settings