Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p21880 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 2274.2 1171 100.0
A09p41970 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 2256.1 1172 99.2
Sp1g20280 Schrenkiella parvula HOM05D003952 ORTHO05D005083 0.0e+00 2088.9 1178 93.1
Thhalv10006603m.g Eutrema salsugineum HOM05D003952 ORTHO05D005083 0.0e+00 2086.2 1178 93.1
AL1G36320 Arabidopsis lyrata HOM05D003952 ORTHO05D005083 0.0e+00 2061.2 1180 92.0
AT1G22770 Arabidopsis thaliana HOM05D003952 ORTHO05D005083 0.0e+00 2060.8 1181 91.8
Carub.0001s2228 Capsella rubella HOM05D003952 ORTHO05D005083 0.0e+00 2060.0 1176 91.9
CARHR023130 Cardamine hirsuta HOM05D003952 ORTHO05D005083 0.0e+00 2047.7 1178 91.7
Aa31LG7G6730 Aethionema arabicum HOM05D003952 ORTHO05D005083 0.0e+00 2007.3 1179 89.2
THA.LOC104810466 Tarenaya hassleriana HOM05D003952 ORTHO05D005083 0.0e+00 1798.9 1180 81.5
Thecc.08G159400 Theobroma cacao HOM05D003952 ORTHO05D005083 0.0e+00 1701.4 1183 76.3
Duzib093G1052 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1697.2 1176 76.1
Atru.chr13.2009 Acer truncatum HOM05D003952 ORTHO05D005083 0.0e+00 1695.2 1181 75.9
Potri.005G196700 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1686.8 1179 75.6
Cfa018280 Carpinus fangiana HOM05D003952 ORTHO05D005083 0.0e+00 1686.0 1176 75.6
QL02p037499 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1684.5 1176 75.5
QL02p038017 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1683.3 1176 75.4
Haze_17805 Corylus avellana HOM05D003952 ORTHO05D005083 0.0e+00 1681.4 1178 75.7
Prupe.8G040600 Prunus persica HOM05D003952 ORTHO05D005083 0.0e+00 1678.7 1177 75.6
CiPaw.15G012400 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1678.3 1176 75.6
Potri.002G064400 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1677.1 1180 75.6
FvH4_2g13030 Fragaria vesca HOM05D003952 ORTHO05D005083 0.0e+00 1669.4 1186 75.0
RcHm_v2.0_Chr6g0274251 Rosa chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1667.9 1188 74.7
CSS0032669 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1666.7 1182 74.5
Glyma.10G221500 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1666.4 1175 75.1
Lalb_Chr02g0141571 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1664.0 1179 74.7
VMungo0720G2354 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1662.1 1196 74.0
Gohir.A05G246500 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1661.4 1176 74.7
Gohir.D05G248000 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1660.2 1177 74.9
Gorai.009G258800 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1660.2 1177 74.9
FAN15G1441 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1656.0 1221 73.1
MD10G1034200 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1656.0 1177 74.3
PGR042G0685 Punica granatum HOM05D003952 ORTHO05D005083 0.0e+00 1653.6 1173 75.0
Lalb_Chr06g0161721 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1653.3 1174 75.2
FAN27G2428 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1651.0 1224 72.5
FAN20G1325 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1650.2 1224 72.5
Eucgr.F02686 Eucalyptus grandis HOM05D003952 ORTHO05D005083 0.0e+00 1649.0 1172 75.1
FAN24G3461 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1649.0 1224 72.4
Cc10_g15270 Coffea canephora HOM05D003952 ORTHO05D005083 0.0e+00 1647.1 1172 73.4
Duzib116G0427 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1645.6 1176 74.4
MD05G1033400 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1644.8 1178 74.3
Medtr1g098160 Medicago truncatula HOM05D003952 ORTHO05D005083 0.0e+00 1643.6 1179 74.2
Gohir.A02G062600 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1637.5 1175 74.6
TWI60G0338 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1637.1 1178 73.5
Phvul.007G083500 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1635.9 1196 73.2
TAR628G1191 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1635.5 1178 73.8
Gorai.005G077100 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1632.8 1174 74.5
CANSAT25G0323 Cannabis sativa HOM05D003952 ORTHO05D005083 0.0e+00 1631.3 1184 74.1
CSS0017406 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1630.5 1174 73.9
arahy.Tifrunner.gnm1.ann1.5NL3D9 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1630.2 1216 72.5
Sabra05G0149800 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1630.2 1233 70.6
Gohir.D02G068200 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1629.8 1176 74.5
Glyma.20G170000 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1628.2 1173 74.0
arahy.Tifrunner.gnm1.ann1.2T81X8 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1627.8 1216 72.5
Sabra02G0051500 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1626.3 1233 71.0
Rhsim11G0087700 Rhododendron simsii HOM05D003952 ORTHO05D005083 0.0e+00 1622.1 1218 72.5
arahy.Tifrunner.gnm1.ann1.SZWP5S Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1620.9 1172 74.0
TWI34G1640 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1619.4 1177 73.2
TWI32G0799 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1618.2 1180 72.9
Lj5g0005273 Lotus japonicus HOM05D003952 ORTHO05D005083 0.0e+00 1617.4 1176 73.5
MSTRG.24931 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1615.5 1172 72.1
arahy.Tifrunner.gnm1.ann1.AF3FG0 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1609.7 1204 72.3
vmacro01493 Vaccinium macrocarpon HOM05D003952 ORTHO05D005083 0.0e+00 1605.1 1217 71.4
Sc20g0003770 Simmondsia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1604.0 1181 72.3
CsaV3_6G005020 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1602.4 1176 71.9
SalBow7G2315 Salvia bowleyana HOM05D003952 ORTHO05D005083 0.0e+00 1602.4 1174 71.3
MELO3C030034.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1597.8 1176 72.0
Sed0019934 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1596.6 1177 71.5
MELO3C024067.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1585.9 1179 71.9
Nn008s41421 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1585.1 1183 72.2
ClCG08G007370 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1584.3 1176 71.5
Peaxi162Scf00360g00418 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1583.5 1176 71.9
MSTRG.22108 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1582.8 1174 71.4
Ca_10663_v3 Cicer arietinum L. HOM05D003952 ORTHO05D005083 0.0e+00 1582.8 1235 69.7
CsaV3_7G024490 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1582.4 1180 71.6
DCAR_001164 Daucus carota HOM05D003952 ORTHO05D005083 0.0e+00 1580.1 1177 71.4
Sed0012183 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1577.0 1175 70.6
MBI04_g08946_MAGBIO Magnolia biondii HOM05D003952 ORTHO05D005083 0.0e+00 1576.2 1176 71.4
Phvul.004G088300 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1569.3 1179 72.1
Glyma.16G163200 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1567.7 1178 72.2
EL10Ac1g01605 Beta vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1567.0 1236 68.4
Migut.N02951 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1567.0 1179 71.0
Sopen04g027970 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1565.8 1174 70.9
Solyc04g071990.3 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1565.4 1174 70.9
HanXRQChr11g0320211 Helianthus annuus HOM05D003952 ORTHO05D005083 0.0e+00 1562.7 1168 70.8
ECA246G0004 Erigeron canadensis HOM05D003952 ORTHO05D005083 0.0e+00 1562.4 1178 70.3
TPR.G17028 Trifolium pratense HOM05D003952 ORTHO05D005083 0.0e+00 1560.8 1183 71.1
Aqoxy6G00415 Aquilegia oxysepala HOM05D003952 ORTHO05D005083 0.0e+00 1560.4 1175 71.1
CAN.G495.15 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1560.4 1162 71.1
SGA_v2.0_scaffold133G34641 Striga asiatica HOM05D003952 ORTHO05D005083 0.0e+00 1557.3 1173 70.5
Solyc12g056650.2 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1555.8 1182 70.6
Oeu051283.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1552.3 1176 69.6
AUR62034894 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1551.2 1241 67.4
Nitab4.5_0000872g0040 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1550.4 1177 71.0
Oeu002069.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1547.7 1209 68.7
Nn5g28824 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1546.6 1179 70.8
Sopen12g029310 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1546.2 1181 70.2
Ciclev10004044m.g Citrus clementina HOM05D003952 ORTHO05D005083 0.0e+00 1544.6 1103 74.1
Nitab4.5_0000099g0200 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1544.3 1203 69.7
Migut.C00380 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1543.9 1174 70.4
Lsat_1_v5_gn_6_101520 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1539.2 1166 71.0
CAN.G26.47 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1536.5 1179 69.9
PSO170G5657 Papaver somniferum HOM05D003952 ORTHO05D005083 0.0e+00 1534.2 1180 69.7
Nitab4.5_0004270g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1533.1 1202 69.6
Psat6g190640 Pisum sativum HOM05D003952 ORTHO05D005083 0.0e+00 1530.4 1076 76.0
Lsat_1_v5_gn_9_42181 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1522.7 1183 68.6
Os01g0182600 Oryza sativa ssp. japonica HOM05D003952 ORTHO05D005083 0.0e+00 1518.1 1170 68.5
ClCG09G010210 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1515.7 1157 70.7
Zm00001eb122110 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1508.0 1172 67.7
Zm00001eb337600 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1507.7 1171 68.3
Nitab4.5_0005673g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1505.0 1176 69.5
Manes.18G095000 Manihot esculenta HOM05D003952 ORTHO05D005083 0.0e+00 1496.1 1181 69.7
Lj7A383T43 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1491.5 1182 68.5
ATR1120G094 Amborella trichopoda HOM05D003952 ORTHO05D005083 0.0e+00 1471.1 1151 68.7
Peaxi162Scf00160g01744 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1467.6 1209 66.6
BcaNung06971 Brassica carinata HOM05D003952 ORTHO05D005083 0.0e+00 1464.9 804 95.4
HPP92_008674 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1456.4 1178 66.1
HPP92_008686 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1450.6 1178 66.1
AUR62026637 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1397.1 1123 67.9
unitig_747.g21544 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1346.3 1173 63.1
Dinv25899 Davidia involucrata HOM05D003952 ORTHO05D005083 0.0e+00 1327.8 947 74.3
CiPaw.16G008300 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1319.3 944 73.5
Ah.05g168180 Amaranthus hybridus HOM05D003952 ORTHO05D005083 0.0e+00 1305.4 1069 67.4
COL.COLO4_13783 Corchorus olitorius HOM05D003952 ORTHO05D005083 0.0e+00 1260.7 1042 67.9
Sed0012813 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1258.0 943 71.8
Lalb_Chr01g0009771 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1246.5 975 69.6
unitig_32.g11167 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1187.9 1165 57.5
Lj4C703T11 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1162.5 957 66.5
PGSC0003DMG400018791 Solanum tuberosum HOM05D003952 ORTHO05D005083 0.0e+00 1135.9 895 69.2
CSS0023419 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1123.6 981 64.9
Actinidia29549 Actinidia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1097.0 965 64.4
TAR381G0458 Trochodendron aralioides HOM05D003952 ORTHO05D005083 7.4e-300 1034.2 820 69.1
Oeu022058.1 Olea europaea HOM05D003952 ORTHO05D005083 3.6e-294 1015.4 817 67.8
SalBow6G3936 Salvia bowleyana HOM05D003952 ORTHO05D005083 4.7e-294 1015.0 1162 52.8
VMungo0464G1608 Vigna mungo HOM05D003952 ORTHO05D005083 3.0e-293 1012.3 815 69.7
SMO367G0140 Selaginella moellendorffii HOM05D003952 ORTHO05D005083 2.5e-287 992.6 1178 48.6
Mapoly0019s0145 Marchantia polymorpha HOM05D003952 ORTHO05D005083 2.4e-274 949.5 1203 46.6
Hma1.2p1_0678F.1_g202015 Hydrangea macrophylla HOM05D003952 ORTHO05D005083 6.1e-262 908.3 730 69.2
GSVIVG01001406001 Vitis vinifera HOM05D003952 ORTHO05D005083 7.5e-260 901.4 538 83.3
CDE04G2370 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 2.1e-230 803.5 720 63.3
Cpa.g.sc26.82 Carica papaya HOM05D003952 ORTHO05D005083 9.6e-223 778.1 605 71.7
CDE04G1363 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 2.7e-185 653.7 429 77.4
BolC5t30883H Brassica oleracea HOM05D003952 ORTHO05D005083 2.1e-177 627.5 307 100.0
BraA09t39685Z Brassica rapa HOM05D003952 ORTHO05D005083 3.0e-176 623.6 307 99.3
VMungo0464G1293 Vigna mungo HOM05D003952 ORTHO05D005083 1.9e-162 577.8 357 81.0
TAR381G1674 Trochodendron aralioides HOM05D003952 ORTHO05D005083 7.3e-130 469.5 305 75.7
Actinidia04747 Actinidia chinensis HOM05D003952 ORTHO05D005083 1.9e-125 454.9 879 38.1
AagrBONN_evm.TU.Sc2ySwM_117.1660 Anthoceros agrestis HOM05D003952 ORTHO05D005083 9.6e-114 416.0 728 37.6
GSVIVG01001405001 Vitis vinifera HOM05D003952 ORTHO05D005083 1.3e-110 405.6 291 73.9
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 2.2e-110 404.8 615 43.1
CBR_g22347 Chara braunii HOM05D003952 ORTHO05D005083 1.9e-101 375.2 1319 28.9
Cpa.g.sc26.81 Carica papaya HOM05D003952 ORTHO05D005083 1.3e-94 352.4 222 76.1
Lj4A703G54 Lonicera japonica HOM05D003952 ORTHO05D005083 1.5e-79 302.4 202 74.3
COL.COLO4_13782 Corchorus olitorius HOM05D003952 ORTHO05D005083 2.5e-74 285.0 183 76.0
Lsat_1_v5_gn_2_63220 Lactuca sativa HOM05D003952 ORTHO05D005083 4.3e-74 284.3 275 61.1
HanXRQChr10g0278641 Helianthus annuus HOM05D003952 ORTHO05D005083 2.2e-73 282.0 211 68.2
CDE04G3041 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 1.0e-70 273.1 504 39.3
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 1.8e-64 252.3 189 66.1
Lsat_1_v5_gn_5_129380 Lactuca sativa HOM05D003952 ORTHO05D015589 2.4e-64 251.9 191 68.1
Sopen10g022170 Solanum pennellii HOM05D003952 ORTHO05D011221 1.2e-63 249.6 144 84.0
Lsat_1_v5_gn_8_75660 Lactuca sativa HOM05D003952 ORTHO05D005083 8.5e-62 243.4 249 58.6
Lalb_Chr01g0009781 Lupinus albus HOM05D003952 ORTHO05D005083 1.6e-55 222.6 193 63.2
Lsat_1_v5_gn_3_78320 Lactuca sativa HOM05D003952 ORTHO05D005083 1.2e-50 206.5 130 80.0
CANSAT25G0696 Cannabis sativa HOM05D003952 ORTHO05D005083 4.8e-49 201.1 118 87.3
Psat5g166880 Pisum sativum HOM05D003952 ORTHO05D005083 4.2e-45 188.0 201 55.7
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 5.5e-45 187.6 125 73.6
Duzib041G0651 Durio zibethinus HOM05D003952 ORTHO05D005083 4.2e-37 161.4 92 89.1
Psat0s4455g0040 Pisum sativum HOM05D003952 ORTHO05D037363 9.5e-29 133.7 86 74.4
Psat7g010640 Pisum sativum HOM05D003952 ORTHO05D037363 1.2e-28 133.3 91 69.2
Psat7g010720 Pisum sativum HOM05D003952 ORTHO05D037363 1.2e-28 133.3 91 69.2
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 1.6e-20 106.3 78 70.5
Nn3g20398 Nelumbo nucifera HOM05D003952 ORTHO05D005083 1.8e-19 102.8 83 65.1
Lsat_1_v5_gn_7_62680 Lactuca sativa HOM05D003952 ORTHO05D015589 6.8e-19 100.9 86 58.1
Lsat_1_v5_gn_3_73081 Lactuca sativa HOM05D003952 ORTHO05D015589 4.9e-17 94.7 47 83.0
TPR.G25241 Trifolium pratense HOM05D003952 ORTHO05D048898 1.2e-15 90.1 59 71.2
Lsat_1_v5_gn_5_15721 Lactuca sativa HOM05D001610 ORTHO05D001585 2.3e-11 75.9 133 42.9
PGSC0003DMG400001110 Solanum tuberosum HOM05D003952 ORTHO05D005083 2.0e-10 72.8 87 44.8


User provided reference genes

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