Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 1.4e-162 576.2 287 100.0
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 2.2e-157 558.9 281 99.3
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 8.5e-157 557.0 281 98.9
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 3.1e-151 538.5 281 96.8
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 3.1e-151 538.5 281 96.8
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 7.7e-150 533.9 279 94.6
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 8.3e-144 513.8 283 90.8
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 7.0e-143 510.8 283 90.5
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 5.9e-142 507.7 284 90.8
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 6.5e-141 504.2 282 89.7
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.8e-138 496.1 284 87.7
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 4.9e-136 488.0 272 90.1
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 3.4e-121 438.7 279 77.4
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 8.9e-114 414.1 278 72.7
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 2.6e-113 412.5 282 72.3
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 3.7e-112 408.7 271 73.8
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 4.9e-112 408.3 284 71.8
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 7.1e-111 404.4 272 72.8
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 2.1e-110 402.9 271 70.1
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 6.0e-110 401.4 276 71.0
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.0e-109 400.6 281 72.2
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 6.6e-109 397.9 281 70.5
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 6.6e-109 397.9 281 70.5
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 1.9e-108 396.4 281 70.1
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.9e-108 396.4 281 70.8
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 4.3e-108 395.2 257 73.2
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 9.5e-108 394.0 273 70.0
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 8.1e-107 391.0 276 69.2
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.1e-106 390.6 276 72.1
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 1.4e-106 390.2 289 66.1
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.2e-105 387.1 268 70.9
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.2e-105 387.1 273 68.9
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 2.0e-105 386.3 268 70.1
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 4.4e-105 385.2 262 70.2
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 4.4e-105 385.2 266 72.6
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 9.9e-105 384.0 273 69.2
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.2e-104 382.9 276 69.6
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 2.2e-104 382.9 262 69.8
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 3.8e-104 382.1 266 71.4
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 1.1e-103 380.6 276 69.6
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.1e-103 380.6 276 69.6
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 1.9e-103 379.8 262 69.8
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.2e-102 377.1 254 72.4
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.6e-102 376.7 286 65.7
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 6.0e-102 374.8 277 67.1
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 6.0e-102 374.8 267 70.8
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 2.3e-101 372.9 260 71.2
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 6.6e-101 371.3 276 67.4
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 1.5e-100 370.2 268 67.5
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 4.3e-100 368.6 269 67.7
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 4.3e-100 368.6 272 67.3
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 5.6e-100 368.2 274 68.6
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.6e-99 366.7 251 70.1
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 2.1e-99 366.3 279 66.7
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.8e-99 365.9 272 69.5
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 4.7e-99 365.2 270 67.0
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 4.7e-99 365.2 269 69.5
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 1.1e-98 364.0 279 67.0
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.8e-98 363.2 268 68.3
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 1.8e-98 363.2 272 65.4
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 3.1e-98 362.5 269 68.4
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 5.3e-98 361.7 265 70.9
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 5.3e-98 361.7 269 68.4
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 5.3e-98 361.7 261 71.3
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 2.0e-97 359.8 269 66.2
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 2.6e-97 359.4 285 63.9
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 9.9e-97 357.5 271 66.1
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 2.2e-96 356.3 281 64.1
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 3.8e-96 355.5 260 68.5
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 8.4e-96 354.4 342 57.3
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 3.2e-95 352.4 260 68.5
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 4.2e-95 352.1 260 68.5
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 2.7e-94 349.4 263 66.9
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 6.0e-94 348.2 271 64.6
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 1.0e-93 347.4 271 64.9
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 3.0e-93 345.9 269 61.7
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 3.9e-93 345.5 276 65.2
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 6.6e-93 344.7 261 67.0
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 1.5e-92 343.6 278 64.0
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 7.3e-92 341.3 282 63.5
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 7.3e-92 341.3 282 63.5
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 1.4e-90 337.0 282 63.1
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 6.9e-90 334.7 282 62.4
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.2e-89 334.0 260 64.2
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 4.9e-88 328.6 277 63.9
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 4.6e-86 322.0 289 62.3
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 6.7e-85 318.2 275 64.0
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 2.8e-83 312.8 273 59.0
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 5.6e-76 288.5 268 56.7
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 1.2e-73 280.8 178 73.6
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.9e-71 273.5 190 67.9
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.6e-70 270.4 136 94.9
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 6.7e-69 265.0 178 71.9
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 3.7e-67 259.2 172 71.5
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 4.1e-66 255.8 176 73.3
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 9.4e-63 244.6 187 68.4
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 2.1e-62 243.4 291 46.4
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 8.8e-61 238.0 174 69.0
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.0e-56 224.6 174 67.2
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 4.2e-55 219.2 268 46.3
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 6.1e-54 215.3 272 46.3
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 7.4e-52 208.4 281 45.2
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.1e-50 204.5 157 66.9
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.4e-47 194.1 267 44.9
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 8.0e-46 188.3 221 48.9
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 5.0e-40 169.1 268 38.1
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.4e-37 161.0 277 38.6
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.8e-32 142.9 137 55.5
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.2e-31 139.8 78 84.6
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.4e-26 123.6 280 32.1
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 2.7e-25 120.2 157 43.9
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 2.9e-24 116.7 90 60.0
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 5.2e-21 105.9 173 41.6
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.4e-20 103.2 65 69.2
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 1.6e-17 94.4 71 67.6
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 8.6e-16 88.6 67 62.7
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.5e-15 87.0 72 61.1
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.3e-11 74.7 130 39.2
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 5.4e-10 69.3 82 47.6
Carub.0005s2346 Capsella rubella HOM05D006622 ORTHO05D007939 6.0e-09 65.9 47 72.3


User provided reference genes

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