Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 6.3e-115 417.5 226 100.0
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 7.8e-89 330.9 197 87.3
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 6.0e-81 304.7 197 89.8
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 3.4e-76 288.9 191 88.0
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 4.2e-66 255.4 221 70.1
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 2.3e-64 249.6 200 73.0
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.9e-64 248.8 220 69.5
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 6.7e-64 248.1 209 67.0
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.9e-63 246.5 218 69.3
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 2.2e-51 206.5 195 68.7
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 3.1e-37 159.5 199 57.8
BolC5t30769H Brassica oleracea HOM05D005772 ORTHO05D006468 3.2e-34 149.4 82 92.7
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.3e-31 139.4 182 46.7
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 2.4e-29 133.3 219 39.7
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 7.2e-26 121.7 206 39.8
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 7.2e-26 121.7 205 36.6
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 2.7e-25 119.8 206 38.3
BcaB03g14256 Brassica carinata HOM05D002121 ORTHO05D004000 8.0e-25 118.2 118 58.5
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 1.1e-23 114.4 208 36.1
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 6.3e-22 108.6 199 35.7
BraA07t29240Z Brassica rapa HOM05D005772 ORTHO05D006468 2.4e-21 106.7 72 79.2
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.1e-21 105.9 243 33.3
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 7.0e-21 105.1 203 36.5
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 7.0e-21 105.1 194 39.2
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 9.1e-21 104.8 194 35.6
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.0e-20 103.6 202 36.6
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 2.0e-20 103.6 196 37.2
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 5.9e-20 102.1 199 35.7
BolC5t30910H Brassica oleracea HOM05D002121 ORTHO05D039495 1.3e-19 100.9 76 75.0
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 2.2e-19 100.1 211 35.5
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.9e-19 99.8 189 37.0
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.5e-18 97.4 202 35.1
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 9.4e-18 94.7 205 36.1
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 2.7e-17 93.2 212 33.5
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 2.7e-17 93.2 207 30.0
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 4.0e-16 89.4 205 40.0
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.2e-15 87.8 201 32.3
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 2.0e-15 87.0 220 29.5
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 4.4e-15 85.9 194 39.2
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 5.7e-15 85.5 216 29.2
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 1.3e-14 84.3 85 47.1
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.8e-14 83.2 205 32.2
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 3.7e-14 82.8 202 33.2
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 3.7e-14 82.8 208 33.7
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 4.8e-14 82.4 206 29.6
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 1.8e-13 80.5 220 30.9
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 2.4e-13 80.1 219 31.1
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 5.4e-13 79.0 209 33.0
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 9.1e-13 78.2 201 31.3
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 9.1e-13 78.2 201 30.3
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 1.2e-12 77.8 156 32.1
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 2.0e-12 77.0 222 30.2
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 3.5e-12 76.3 215 30.2
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 4.5e-12 75.9 157 33.8
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 1.7e-11 73.9 195 32.3
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.8e-11 72.8 86 37.2
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.8e-11 72.8 86 37.2
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.8e-11 72.8 86 37.2
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 8.5e-11 71.6 206 31.1
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 1.1e-10 71.2 208 30.8
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 1.1e-10 71.2 84 38.1
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 1.5e-10 70.9 187 31.0
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.5e-10 70.9 83 37.3
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 1.5e-10 70.9 86 38.4
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 1.9e-10 70.5 212 32.1
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.5e-10 70.1 206 31.1
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 4.2e-10 69.3 95 35.8
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 5.5e-10 68.9 160 28.8
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 7.2e-10 68.6 85 41.2
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 9.4e-10 68.2 83 36.1
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 9.4e-10 68.2 86 37.2
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 9.4e-10 68.2 83 36.1
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.2e-09 67.8 83 36.1
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 1.2e-09 67.8 85 36.5
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 2.7e-09 66.6 85 40.0
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 3.6e-09 66.2 176 32.4
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 6.1e-09 65.5 84 36.9
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 6.1e-09 65.5 189 28.0
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 8.0e-09 65.1 138 30.4
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 1.4e-08 64.3 84 35.7
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 3.0e-08 63.2 205 31.7
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 5.2e-08 62.4 86 31.4
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 6.8e-08 62.0 86 33.7
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 1.2e-07 61.2 112 31.2
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.5e-07 60.8 84 35.7
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.0e-07 60.5 84 34.5
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 5.7e-07 58.9 166 33.1
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 7.5e-07 58.5 194 26.3
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 9.8e-07 58.2 203 35.5
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.7e-06 57.4 84 29.8
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 1.7e-06 57.4 170 28.2
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.7e-06 57.4 194 28.9
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.2e-06 57.0 205 27.3
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 6.3e-06 55.5 84 29.8
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 8.3e-06 55.1 176 31.2


User provided reference genes

Program Settings