Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p20400 Brassica napus HOM05D007607 ORTHO05D009603 1.0e-53 213.4 126 100.0
BcaC05g26059 Brassica carinata HOM05D007607 ORTHO05D009603 3.1e-50 201.8 126 95.2
BolC5t30734H Brassica oleracea HOM05D007607 ORTHO05D009603 3.1e-50 201.8 126 95.2
BraA06t24849Z Brassica rapa HOM05D007607 ORTHO05D009603 1.1e-47 193.4 126 95.2
A06p17530 Brassica napus HOM05D007607 ORTHO05D009603 4.1e-47 191.4 126 94.4
BcaB07g32146 Brassica carinata HOM05D007607 ORTHO05D009603 8.1e-43 177.2 123 89.4
BcaC06g34863 Brassica carinata HOM05D007607 ORTHO05D009603 1.5e-41 172.9 123 86.2
BolC7t42778H Brassica oleracea HOM05D007607 ORTHO05D009603 1.5e-41 172.9 123 86.2
BcaB03g14267 Brassica carinata HOM05D007607 ORTHO05D009603 3.4e-41 171.8 123 84.6
C07p22190 Brassica napus HOM05D007607 ORTHO05D009603 2.2e-40 169.1 123 85.4
A07p15130 Brassica napus HOM05D007607 ORTHO05D009603 3.7e-40 168.3 123 82.9
Sp1g19030 Schrenkiella parvula HOM05D007607 ORTHO05D009603 3.7e-40 168.3 119 88.2
Thhalv10009074m.g Eutrema salsugineum HOM05D007607 ORTHO05D009603 1.2e-35 153.3 117 82.1
CARHR021860 Cardamine hirsuta HOM05D007607 ORTHO05D009603 1.7e-32 142.9 127 73.2
AL1G34640 Arabidopsis lyrata HOM05D007607 ORTHO05D009603 2.2e-32 142.5 126 73.8
AT1G21500 Arabidopsis thaliana HOM05D007607 ORTHO05D009603 1.4e-31 139.8 126 72.2
Carub.0001s2092 Capsella rubella HOM05D007607 ORTHO05D009603 1.4e-31 139.8 123 71.5
Aa31LG7G5390 Aethionema arabicum HOM05D007607 ORTHO05D009603 1.1e-28 130.2 123 71.5
THA.LOC104813690 Tarenaya hassleriana HOM05D007607 ORTHO05D009603 7.8e-22 107.5 126 61.1
Gohir.A10G145500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 6.6e-13 77.8 111 54.1
Haze_01353 Corylus avellana HOM05D007607 ORTHO05D009603 1.9e-12 76.3 77 68.8
Gohir.D10G121500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 1.9e-12 76.3 111 53.2
Gorai.011G133600 Gossypium raimondii HOM05D007607 ORTHO05D009603 1.9e-12 76.3 111 53.2
Cfa015274 Carpinus fangiana HOM05D007607 ORTHO05D009603 3.3e-12 75.5 77 57.1
Actinidia28975 Actinidia chinensis HOM05D007607 ORTHO05D009603 9.6e-12 73.9 77 54.5
Ciclev10022842m.g Citrus clementina HOM05D007607 ORTHO05D009603 1.6e-11 73.2 77 67.5
PGR142G0203 Punica granatum HOM05D007607 ORTHO05D009603 2.1e-11 72.8 87 60.9
QL10p057428 Quercus lobata HOM05D007607 ORTHO05D009603 2.1e-11 72.8 82 62.2
Atru.chr4.1510 Acer truncatum HOM05D007607 ORTHO05D009603 3.6e-11 72.0 87 59.8
Atru.chr4.1481 Acer truncatum HOM05D007607 ORTHO05D009603 6.2e-11 71.2 87 59.8
MD02G1004100 Malus domestica HOM05D007607 ORTHO05D009603 1.1e-10 70.5 84 64.3
QL10p057723 Quercus lobata HOM05D007607 ORTHO05D009603 1.1e-10 70.5 82 63.4
Rhsim02G0085800 Rhododendron simsii HOM05D007607 ORTHO05D009603 1.1e-10 70.5 77 66.2
RhsimUnG0015300 Rhododendron simsii HOM05D007607 ORTHO05D009603 1.1e-10 70.5 77 66.2
CiPaw.01G169900 Carya illinoinensis HOM05D007607 ORTHO05D009603 1.4e-10 70.1 82 59.8
Peaxi162Scf00883g00099 Petunia axillaris HOM05D007607 ORTHO05D009603 1.4e-10 70.1 121 52.1
CAN.G1237.5 Capsicum annuum HOM05D007607 ORTHO05D009603 3.1e-10 68.9 82 62.2
Dinv18311 Davidia involucrata HOM05D007607 ORTHO05D009603 6.9e-10 67.8 82 58.5
Glyma.07G206400 Glycine max HOM05D007607 ORTHO05D009603 6.9e-10 67.8 109 51.4
Eucgr.H00285 Eucalyptus grandis HOM05D007607 ORTHO05D009603 1.2e-09 67.0 121 52.9
Potri.013G128700 Populus trichocarpa HOM05D007607 ORTHO05D009603 1.2e-09 67.0 82 59.8
Glyma.02G138600 Glycine max HOM05D007607 ORTHO05D009603 1.5e-09 66.6 103 54.4
Lalb_Chr16g0384371 Lupinus albus HOM05D007607 ORTHO05D009603 1.5e-09 66.6 85 56.5
CSS0037895 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 2.0e-09 66.2 80 65.0
Duzib212G0637 Durio zibethinus HOM05D007607 ORTHO05D009603 2.0e-09 66.2 110 44.5
Manes.05G131900 Manihot esculenta HOM05D007607 ORTHO05D009603 2.0e-09 66.2 139 47.5
PSO017G0391 Papaver somniferum HOM05D007607 ORTHO05D009603 2.0e-09 66.2 77 53.2
PSO675G5570 Papaver somniferum HOM05D007607 ORTHO05D009603 2.6e-09 65.9 77 53.2
arahy.Tifrunner.gnm1.ann1.RJI6AK Arachis hypogaea HOM05D007607 ORTHO05D009603 3.4e-09 65.5 102 52.9
CSS0042213 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 4.5e-09 65.1 80 63.8
CiPaw.02G100000 Carya illinoinensis HOM05D007607 ORTHO05D009603 4.5e-09 65.1 138 46.4
Lj4g0023803 Lotus japonicus HOM05D007607 ORTHO05D009603 5.8e-09 64.7 138 41.3
CANSAT56G1551 Cannabis sativa HOM05D007607 ORTHO05D009603 7.6e-09 64.3 77 59.7
Nitab4.5_0008331g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.6e-09 64.3 122 48.4
Solyc12g019550.2 Solanum lycopersicum HOM05D007607 ORTHO05D009603 7.6e-09 64.3 79 62.0
Cpa.g.sc343.4 Carica papaya HOM05D007607 ORTHO05D009603 9.9e-09 63.9 82 63.4
Cc03_g14540 Coffea canephora HOM05D007607 ORTHO05D009603 9.9e-09 63.9 121 50.4
Prupe.7G267000 Prunus persica HOM05D007607 ORTHO05D009603 9.9e-09 63.9 88 61.4
Sed0020904 Sechium edule HOM05D007607 ORTHO05D009603 9.9e-09 63.9 84 48.8
VMungo0251G2348 Vigna mungo HOM05D007607 ORTHO05D009603 9.9e-09 63.9 114 49.1
GSVIVG01038189001 Vitis vinifera HOM05D007607 ORTHO05D009603 9.9e-09 63.9 82 62.2
Thecc.04G162800 Theobroma cacao HOM05D007607 ORTHO05D009603 1.7e-08 63.2 134 44.0
ECA233G0487 Erigeron canadensis HOM05D007607 ORTHO05D009603 2.2e-08 62.8 99 40.4
MBI10_g16327_MAGBIO Magnolia biondii HOM05D007607 ORTHO05D009603 2.2e-08 62.8 77 62.3
Sopen12g009810 Solanum pennellii HOM05D007607 ORTHO05D009603 2.2e-08 62.8 79 62.0
Aqoxy2G03795 Aquilegia oxysepala HOM05D007607 ORTHO05D009603 3.8e-08 62.0 97 52.6
MD15G1147800 Malus domestica HOM05D007607 ORTHO05D009603 3.8e-08 62.0 85 60.0
PGSC0003DMG400029159 Solanum tuberosum HOM05D007607 ORTHO05D009603 3.8e-08 62.0 120 52.5
FvH4_1g00500 Fragaria vesca HOM05D007607 ORTHO05D009603 4.9e-08 61.6 80 62.5
Hund12359 Selenicereus undatus HOM05D007607 ORTHO05D009603 6.4e-08 61.2 105 46.7
TAR362G0213 Trochodendron aralioides HOM05D007607 ORTHO05D009603 6.4e-08 61.2 78 62.8
Sc13g0006620 Simmondsia chinensis HOM05D007607 ORTHO05D009603 8.4e-08 60.8 75 52.0
HanXRQChr02g0059081 Helianthus annuus HOM05D007607 ORTHO05D009603 1.4e-07 60.1 127 49.6
Lsat_1_v5_gn_8_9141 Lactuca sativa HOM05D007607 ORTHO05D009603 1.9e-07 59.7 103 42.7
AUR62002416 Chenopodium quinoa HOM05D007607 ORTHO05D009603 2.4e-07 59.3 90 50.0
TWI15G0968 Tripterygium wilfordii HOM05D007607 ORTHO05D009603 2.4e-07 59.3 77 62.3
DCAR_005451 Daucus carota HOM05D007607 ORTHO05D009603 3.2e-07 58.9 128 38.3
Nitab4.5_0000575g0080 Nicotiana tabacum HOM05D007607 ORTHO05D009603 3.2e-07 58.9 120 50.0
Zm00001eb318610 Zea mays HOM05D007607 ORTHO05D009603 3.2e-07 58.9 76 59.2
EL10Ac3g06110 Beta vulgaris HOM05D007607 ORTHO05D009603 4.2e-07 58.5 106 45.3
Os09g0517000 Oryza sativa ssp. japonica HOM05D007607 ORTHO05D009603 4.2e-07 58.5 38 78.9
Psat7g119360 Pisum sativum HOM05D007607 ORTHO05D009603 4.2e-07 58.5 94 54.3
RcHm_v2.0_Chr2g0085131 Rosa chinensis HOM05D007607 ORTHO05D009603 4.2e-07 58.5 82 63.4
MSTRG.22043 Avicennia marina HOM05D007607 ORTHO05D009603 5.5e-07 58.2 119 47.9
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 7.1e-07 57.8 78 46.2
MSTRG.24562 Avicennia marina HOM05D007607 ORTHO05D009603 9.3e-07 57.4 116 48.3
ClCG11G013470 Citrullus lanatus HOM05D007607 ORTHO05D009603 9.3e-07 57.4 103 51.5
Ah.13g073390 Amaranthus hybridus HOM05D007607 ORTHO05D009603 1.2e-06 57.0 48 66.7
CsaV3_5G030090 Cucumis sativus L. HOM05D007607 ORTHO05D009603 1.2e-06 57.0 101 51.5
SalBow6G6796 Salvia bowleyana HOM05D007607 ORTHO05D009603 1.2e-06 57.0 85 49.4
Migut.N03053 Erythranthe guttata HOM05D007607 ORTHO05D009603 2.1e-06 56.2 119 46.2
MELO3C011848.2 Cucumis melo HOM05D007607 ORTHO05D009603 3.5e-06 55.5 101 50.5
Medtr4g087540 Medicago truncatula HOM05D007607 ORTHO05D009603 3.5e-06 55.5 83 56.6
AUR62023773 Chenopodium quinoa HOM05D007607 ORTHO05D009603 4.6e-06 55.1 107 53.3


User provided reference genes

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