Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p19910 Brassica napus HOM05D003652 ORTHO05D004190 4.0e-53 211.1 101 100.0
BolC5t30688H Brassica oleracea HOM05D003652 ORTHO05D004190 4.0e-53 211.1 101 100.0
BcaC05g26024 Brassica carinata HOM05D003652 ORTHO05D004190 1.3e-27 126.3 64 98.4
AT1G21170 Arabidopsis thaliana HOM05D003652 ORTHO05D004190 4.2e-18 94.7 61 75.4
Carub.0001s2061 Capsella rubella HOM05D003652 ORTHO05D004190 7.2e-18 94.0 59 79.7
AL1G34230 Arabidopsis lyrata HOM05D003652 ORTHO05D004190 9.4e-18 93.6 62 75.8
Thhalv10006745m.g Eutrema salsugineum HOM05D003652 ORTHO05D004190 9.4e-18 93.6 60 76.7
Sp1g18810 Schrenkiella parvula HOM05D003652 ORTHO05D004190 1.2e-17 93.2 62 74.2
CARHR021630 Cardamine hirsuta HOM05D003652 ORTHO05D004190 2.3e-16 89.0 58 74.1
Aa31LG7G5310 Aethionema arabicum HOM05D003652 ORTHO05D004190 5.1e-16 87.8 69 59.4
AT1G76850 Arabidopsis thaliana HOM05D003652 ORTHO05D004190 2.8e-14 82.0 78 52.6
AUR62026715 Chenopodium quinoa HOM05D003652 ORTHO05D004190 2.8e-14 82.0 74 52.7
Potri.005G191500 Populus trichocarpa HOM05D003652 ORTHO05D004190 2.8e-14 82.0 74 54.1
Aqoxy5G02100 Aquilegia oxysepala HOM05D003652 ORTHO05D004190 3.7e-14 81.6 74 55.4
AL2G36970 Arabidopsis lyrata HOM05D003652 ORTHO05D004190 3.7e-14 81.6 78 52.6
AUR62013575 Chenopodium quinoa HOM05D003652 ORTHO05D004190 4.8e-14 81.3 74 52.7
Potri.002G068900 Populus trichocarpa HOM05D003652 ORTHO05D004190 6.3e-14 80.9 74 51.4
THA.LOC104812038 Tarenaya hassleriana HOM05D003652 ORTHO05D004190 6.3e-14 80.9 61 67.2
PGSC0003DMG400024108 Solanum tuberosum HOM05D003652 ORTHO05D004190 8.2e-14 80.5 94 46.8
Sabra05G0146300 Salix brachista HOM05D003652 ORTHO05D004190 1.1e-13 80.1 62 62.9
Solyc04g071350.3 Solanum lycopersicum HOM05D003652 ORTHO05D004190 1.1e-13 80.1 89 47.2
Sopen04g027310 Solanum pennellii HOM05D003652 ORTHO05D004190 1.1e-13 80.1 89 47.2
SGA_v2.0_scaffold19G08667 Striga asiatica HOM05D003652 ORTHO05D004190 1.1e-13 80.1 63 63.5
Zm00001eb422350 Zea mays HOM05D003652 ORTHO05D004190 1.1e-13 80.1 83 45.8
Actinidia10649 Actinidia chinensis HOM05D003652 ORTHO05D004190 1.4e-13 79.7 74 52.7
MSTRG.22372 Avicennia marina HOM05D003652 ORTHO05D004190 1.4e-13 79.7 65 60.0
Migut.N03225 Erythranthe guttata HOM05D003652 ORTHO05D004190 1.4e-13 79.7 65 61.5
SGA_v2.0_scaffold25G11172 Striga asiatica HOM05D003652 ORTHO05D004190 1.4e-13 79.7 63 61.9
unitig_744.g24568 Utricularia gibba HOM05D003652 ORTHO05D004190 1.4e-13 79.7 65 64.6
Nitab4.5_0005705g0020 Nicotiana tabacum HOM05D003652 ORTHO05D004190 1.8e-13 79.3 74 54.1
Atru.chr13.2145 Acer truncatum HOM05D003652 ORTHO05D004190 2.4e-13 79.0 74 52.7
Carub.0002s2373 Capsella rubella HOM05D003652 ORTHO05D004190 2.4e-13 79.0 77 51.9
Hma1.2p1_0105F.1_g050770 Hydrangea macrophylla HOM05D003652 ORTHO05D004190 2.4e-13 79.0 64 60.9
Duzib116G0402 Durio zibethinus HOM05D003652 ORTHO05D004190 3.1e-13 78.6 79 49.4
Os04g0421900 Oryza sativa ssp. japonica HOM05D003652 ORTHO05D004190 3.1e-13 78.6 79 50.6
Hund26699 Selenicereus undatus HOM05D003652 ORTHO05D004190 3.1e-13 78.6 89 42.7
Cc10_g14750 Coffea canephora HOM05D003652 ORTHO05D004190 4.1e-13 78.2 74 54.1
CAN.G268.10 Capsicum annuum HOM05D003652 ORTHO05D004190 5.3e-13 77.8 94 44.7
Ciclev10000108m.g Citrus clementina HOM05D003652 ORTHO05D004190 5.3e-13 77.8 74 51.4
QL02p033637 Quercus lobata HOM05D003652 ORTHO05D004190 5.3e-13 77.8 65 58.5
EL10Ac1g01536 Beta vulgaris HOM05D003652 ORTHO05D004190 7.0e-13 77.4 74 50.0
Nitab4.5_0000140g0050 Nicotiana tabacum HOM05D003652 ORTHO05D004190 7.0e-13 77.4 94 44.7
Nitab4.5_0008106g0010 Nicotiana tabacum HOM05D003652 ORTHO05D004190 7.0e-13 77.4 94 45.7
Dinv41091 Davidia involucrata HOM05D003652 ORTHO05D004190 9.1e-13 77.0 65 58.5
Prupe.8G058700 Prunus persica HOM05D003652 ORTHO05D004190 1.2e-12 76.6 82 47.6
SalBow6G6910 Salvia bowleyana HOM05D003652 ORTHO05D004190 1.2e-12 76.6 65 60.0
VMungo0720G3010 Vigna mungo HOM05D003652 ORTHO05D004190 1.2e-12 76.6 74 48.6
CSS0021982 Camellia sinensis var. sinensis HOM05D003652 ORTHO05D004190 1.6e-12 76.3 65 58.5
Nn5g28722 Nelumbo nucifera HOM05D003652 ORTHO05D004190 1.6e-12 76.3 65 55.4
Sabra02G0054200 Salix brachista HOM05D003652 ORTHO05D004190 1.6e-12 76.3 74 48.6
Zm00001eb083200 Zea mays HOM05D003652 ORTHO05D004190 1.6e-12 76.3 83 44.6
CiPaw.07G160100 Carya illinoinensis HOM05D003652 ORTHO05D004190 2.0e-12 75.9 65 55.4
Peaxi162Scf00765g00049 Petunia axillaris HOM05D003652 ORTHO05D004190 2.0e-12 75.9 74 50.0
HanXRQChr11g0339321 Helianthus annuus HOM05D003652 ORTHO05D004190 2.6e-12 75.5 59 59.3
Manes.02G178800 Manihot esculenta HOM05D003652 ORTHO05D004190 2.6e-12 75.5 74 54.1
Cfa013845 Carpinus fangiana HOM05D003652 ORTHO05D004190 4.5e-12 74.7 64 57.8
Rhsim10G0066500 Rhododendron simsii HOM05D003652 ORTHO05D004190 4.5e-12 74.7 65 56.9
TPR.G8817 Trifolium pratense HOM05D003652 ORTHO05D004190 4.5e-12 74.7 73 50.7
TWI34G0668 Tripterygium wilfordii HOM05D003652 ORTHO05D004190 4.5e-12 74.7 74 48.6
vmacro18508 Vaccinium macrocarpon HOM05D003652 ORTHO05D004190 4.5e-12 74.7 65 56.9
Aa31LG4G6890 Aethionema arabicum HOM05D003652 ORTHO05D004190 5.9e-12 74.3 70 55.7
Eucgr.F04242 Eucalyptus grandis HOM05D003652 ORTHO05D004190 5.9e-12 74.3 74 48.6
Lj5g0007913 Lotus japonicus HOM05D003652 ORTHO05D004190 5.9e-12 74.3 65 53.8
Nn1g06100 Nelumbo nucifera HOM05D003652 ORTHO05D004190 5.9e-12 74.3 65 55.4
Sc02g0004140 Simmondsia chinensis HOM05D003652 ORTHO05D004190 5.9e-12 74.3 74 52.7
TWI60G1418 Tripterygium wilfordii HOM05D003652 ORTHO05D004190 5.9e-12 74.3 74 48.6
GSVIVG01034519001 Vitis vinifera HOM05D003652 ORTHO05D004190 5.9e-12 74.3 65 56.9
Lsat_1_v5_gn_7_71861 Lactuca sativa HOM05D003652 ORTHO05D004190 7.7e-12 73.9 60 56.7
Glyma.10G217200 Glycine max HOM05D003652 ORTHO05D004190 1.0e-11 73.6 65 53.8
Oeu014495.2 Olea europaea HOM05D003652 ORTHO05D004190 1.0e-11 73.6 65 53.8
Rhsim08G0021800 Rhododendron simsii HOM05D003652 ORTHO05D004190 1.0e-11 73.6 65 56.9
TAR376G0660 Trochodendron aralioides HOM05D003652 ORTHO05D004190 1.0e-11 73.6 63 57.1
Glyma.20G174900 Glycine max HOM05D003652 ORTHO05D004190 1.3e-11 73.2 65 53.8
Gohir.A02G064300 Gossypium hirsutum HOM05D003652 ORTHO05D004190 1.3e-11 73.2 62 59.7
Gohir.D02G070200 Gossypium hirsutum HOM05D003652 ORTHO05D004190 1.3e-11 73.2 62 59.7
Gorai.005G079300 Gossypium raimondii HOM05D003652 ORTHO05D004190 1.3e-11 73.2 62 59.7
CsaV3_7G024680 Cucumis sativus L. HOM05D003652 ORTHO05D004190 2.2e-11 72.4 72 47.2
Oeu011939.2 Olea europaea HOM05D003652 ORTHO05D004190 2.2e-11 72.4 65 56.9
MELO3C024093.2 Cucumis melo HOM05D003652 ORTHO05D004190 2.9e-11 72.0 72 45.8
CANSAT25G1176 Cannabis sativa HOM05D003652 ORTHO05D004190 3.8e-11 71.6 61 55.7
ClCG09G010020 Citrullus lanatus HOM05D003652 ORTHO05D004190 3.8e-11 71.6 72 45.8
COL.COLO4_37835 Corchorus olitorius HOM05D003652 ORTHO05D004190 3.8e-11 71.6 62 58.1
PSO210G4735 Papaver somniferum HOM05D003652 ORTHO05D004190 3.8e-11 71.6 65 55.4
PSO238G0028 Papaver somniferum HOM05D003652 ORTHO05D004190 3.8e-11 71.6 65 55.4
Peaxi162Scf01294g00125 Petunia axillaris HOM05D003652 ORTHO05D004190 3.8e-11 71.6 74 51.4
Psat6g186720 Pisum sativum HOM05D003652 ORTHO05D004190 3.8e-11 71.6 64 54.7
Dinv25854 Davidia involucrata HOM05D003652 ORTHO05D004190 5.0e-11 71.2 60 58.3
Nitab4.5_0005926g0010 Nicotiana tabacum HOM05D003652 ORTHO05D004190 5.0e-11 71.2 80 48.8
TAR628G0150 Trochodendron aralioides HOM05D003652 ORTHO05D004190 5.0e-11 71.2 65 53.8
BcaC08g45509 Brassica carinata HOM05D003652 ORTHO05D004190 6.5e-11 70.9 64 56.2
C06p31780 Brassica napus HOM05D003652 ORTHO05D004190 6.5e-11 70.9 64 56.2
BolC6t38307H Brassica oleracea HOM05D003652 ORTHO05D004190 6.5e-11 70.9 64 56.2
Ca_10620_v3 Cicer arietinum L. HOM05D003652 ORTHO05D004190 6.5e-11 70.9 64 53.1
Sed0009622 Sechium edule HOM05D003652 ORTHO05D004190 6.5e-11 70.9 86 37.2
BcaB02g07077 Brassica carinata HOM05D003652 ORTHO05D004190 8.5e-11 70.5 64 54.7
A07p28340 Brassica napus HOM05D003652 ORTHO05D004190 8.5e-11 70.5 64 54.7
BraA07t30471Z Brassica rapa HOM05D003652 ORTHO05D004190 8.5e-11 70.5 64 54.7
Lalb_Chr06g0162011 Lupinus albus HOM05D003652 ORTHO05D004190 8.5e-11 70.5 65 52.3
Medtr1g096550 Medicago truncatula HOM05D003652 ORTHO05D004190 8.5e-11 70.5 64 53.1
Sp5g31980 Schrenkiella parvula HOM05D003652 ORTHO05D004190 8.5e-11 70.5 64 56.2
Lj7C372G9 Lonicera japonica HOM05D003652 ORTHO05D004190 1.1e-10 70.1 70 52.9
MD02G1241400 Malus domestica HOM05D003652 ORTHO05D004190 1.1e-10 70.1 82 47.6
MD07G1075500 Malus domestica HOM05D003652 ORTHO05D004190 1.1e-10 70.1 82 47.6
CAN.G89.17 Capsicum annuum HOM05D003652 ORTHO05D004190 1.5e-10 69.7 80 45.0
CARHR070360 Cardamine hirsuta HOM05D003652 ORTHO05D004190 1.5e-10 69.7 65 56.9
Lalb_Chr21g0305741 Lupinus albus HOM05D003652 ORTHO05D004190 1.9e-10 69.3 65 50.8
PGR042G2936 Punica granatum HOM05D003652 ORTHO05D004190 1.9e-10 69.3 75 45.3
ECA236G0544 Erigeron canadensis HOM05D003652 ORTHO05D004190 2.5e-10 68.9 59 54.2
A06p17210 Brassica napus HOM05D003652 ORTHO05D004190 3.2e-10 68.6 35 94.3
BcaC03g15706 Brassica carinata HOM05D003652 ORTHO05D004190 4.2e-10 68.2 81 48.1
C02p34110 Brassica napus HOM05D003652 ORTHO05D004190 4.2e-10 68.2 81 48.1
BolC2t09427H Brassica oleracea HOM05D003652 ORTHO05D004190 4.2e-10 68.2 81 48.1
DCAR_014431 Daucus carota HOM05D003652 ORTHO05D004190 4.2e-10 68.2 62 56.5
Cpa.g.sc21.193 Carica papaya HOM05D003652 ORTHO05D004190 5.5e-10 67.8 70 50.0
Haze_22519 Corylus avellana HOM05D003652 ORTHO05D004190 9.4e-10 67.0 92 41.3
ATR0772G136 Amborella trichopoda HOM05D003652 ORTHO05D004190 1.2e-09 66.6 64 50.0
A02p20930 Brassica napus HOM05D003652 ORTHO05D004190 1.2e-09 66.6 82 45.1
FvH4_7g05280 Fragaria vesca HOM05D003652 ORTHO05D004190 1.2e-09 66.6 62 54.8
FAN01G0918 Fragaria x ananassa HOM05D003652 ORTHO05D004190 1.2e-09 66.6 62 54.8
FAN03G2156 Fragaria x ananassa HOM05D003652 ORTHO05D004190 1.2e-09 66.6 62 54.8
FAN06G2696 Fragaria x ananassa HOM05D003652 ORTHO05D004190 1.2e-09 66.6 62 54.8
Phvul.007G088900 Phaseolus vulgaris HOM05D003652 ORTHO05D004190 1.2e-09 66.6 59 59.3
RcHm_v2.0_Chr1g0332001 Rosa chinensis HOM05D003652 ORTHO05D004190 1.2e-09 66.6 62 56.5
MBI09_g47603_MAGBIO Magnolia biondii HOM05D003652 ORTHO05D004190 2.1e-09 65.9 83 44.6
ECA247G2571 Erigeron canadensis HOM05D003652 ORTHO05D004190 3.6e-09 65.1 42 66.7
CDE08G0217 Ceratophyllum demersum HOM05D003652 ORTHO05D004190 6.1e-09 64.3 80 36.2
HanXRQChr02g0045411 Helianthus annuus HOM05D003652 ORTHO05D004190 6.1e-09 64.3 47 63.8
HanXRQChr06g0174441 Helianthus annuus HOM05D003652 ORTHO05D004190 6.1e-09 64.3 47 63.8
MBI09_g20113_MAGBIO Magnolia biondii HOM05D003652 ORTHO05D004190 1.4e-08 63.2 56 55.4
Solyc12g056520.3 Solanum lycopersicum HOM05D003652 ORTHO05D004190 2.3e-08 62.4 60 51.7
Sopen12g029110 Solanum pennellii HOM05D003652 ORTHO05D004190 2.3e-08 62.4 60 51.7
MBI09_g18624_MAGBIO Magnolia biondii HOM05D003652 ORTHO05D004190 6.7e-08 60.8 56 53.6
SHI18207 Sapria himalayana HOM05D003652 ORTHO05D004190 2.6e-07 58.9 63 44.4
CDE06G1552 Ceratophyllum demersum HOM05D003652 ORTHO05D004190 4.4e-07 58.2 80 33.8


User provided reference genes

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