Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 2.6e-130 468.8 245 100.0
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 2.6e-130 468.8 245 100.0
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 2.2e-129 465.7 245 99.2
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 2.4e-128 462.2 245 98.4
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 1.3e-118 429.9 243 92.6
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 5.6e-117 424.5 245 91.0
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 5.8e-106 387.9 246 85.8
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 3.9e-102 375.2 246 83.3
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 8.7e-102 374.0 245 84.1
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 1.9e-101 372.9 193 100.0
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 2.5e-101 372.5 245 83.3
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 2.8e-100 369.0 229 86.5
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 5.5e-96 354.8 239 80.8
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 1.4e-88 330.1 246 76.0
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 4.2e-88 328.6 247 75.7
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 3.6e-87 325.5 246 75.2
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 5.1e-86 321.6 248 75.0
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 2.6e-85 319.3 230 77.0
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 6.1e-79 298.1 248 69.0
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.0e-74 283.1 223 70.0
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 1.6e-71 273.5 234 67.1
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 6.8e-54 214.9 248 54.0
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 7.5e-53 211.5 243 53.1
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 7.5e-53 211.5 243 52.7
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 3.7e-52 209.1 247 53.0
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 4.9e-52 208.8 229 54.6
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 1.4e-51 207.2 240 51.7
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.4e-51 206.5 240 52.1
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 5.4e-51 205.3 234 52.6
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 7.0e-51 204.9 238 55.0
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 7.0e-51 204.9 235 54.5
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 9.2e-51 204.5 232 51.7
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 1.2e-50 204.1 245 53.9
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 1.6e-50 203.8 234 53.0
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 4.5e-50 202.2 237 51.9
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 7.8e-50 201.4 225 55.1
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 7.8e-50 201.4 211 53.1
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 1.0e-49 201.1 227 52.9
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.0e-49 201.1 232 53.0
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.7e-49 200.3 246 50.0
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 2.3e-49 199.9 250 51.6
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 2.3e-49 199.9 232 52.6
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 2.3e-49 199.9 233 52.8
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.9e-49 199.5 232 53.0
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.8e-49 199.1 232 53.0
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 5.0e-49 198.7 239 51.9
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 8.6e-49 198.0 214 55.1
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 8.6e-49 198.0 239 51.5
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.1e-48 197.6 237 51.1
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 1.5e-48 197.2 245 51.4
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.9e-48 196.8 230 53.0
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.3e-48 196.1 232 51.7
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 3.3e-48 196.1 247 49.4
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.2e-47 194.1 222 53.6
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.6e-47 193.7 242 49.6
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 2.8e-47 193.0 235 51.9
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 6.1e-47 191.8 241 51.0
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 6.1e-47 191.8 247 51.0
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.4e-46 190.7 241 49.0
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 1.4e-46 190.7 220 50.5
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 1.8e-46 190.3 249 50.6
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.3e-46 189.9 216 53.2
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.3e-46 189.9 235 51.5
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 8.9e-46 188.0 240 47.1
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 8.9e-46 188.0 218 52.8
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.2e-45 187.6 237 48.5
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 2.0e-45 186.8 231 51.1
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.0e-45 186.8 243 51.4
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 4.4e-45 185.7 237 50.2
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 4.4e-45 185.7 225 49.3
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 4.4e-45 185.7 238 49.2
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 7.5e-45 184.9 234 48.7
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.7e-44 183.7 234 50.4
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 2.9e-44 183.0 237 47.3
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 1.1e-43 181.0 238 47.5
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.1e-43 181.0 243 49.8
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.1e-43 181.0 218 50.5
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 1.4e-43 180.6 216 51.9
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 3.2e-43 179.5 236 52.5
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 7.0e-43 178.3 239 46.0
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 9.2e-43 177.9 251 48.2
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 2.0e-42 176.8 253 49.8
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.0e-42 176.8 260 45.8
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 2.7e-42 176.4 242 47.9
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 4.6e-42 175.6 255 45.9
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 5.9e-42 175.3 202 49.5
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 1.0e-41 174.5 191 51.8
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 2.3e-41 173.3 235 47.2
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 2.3e-41 173.3 234 45.3
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 3.0e-41 172.9 239 48.5
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 3.9e-41 172.6 279 43.7
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 4.3e-40 169.1 219 48.9
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 4.3e-40 169.1 210 46.7
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 1.2e-39 167.5 248 48.4
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 2.8e-39 166.4 194 48.5
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 3.6e-39 166.0 242 45.9
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.8e-38 163.7 221 46.6
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 4.0e-38 162.5 199 49.2
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 5.2e-38 162.2 250 42.0
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 8.9e-38 161.4 241 41.5
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 1.5e-37 160.6 216 45.4
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 2.6e-37 159.8 200 51.5
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 3.4e-37 159.5 250 42.8
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.4e-37 159.1 218 44.5
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 4.4e-37 159.1 238 44.5
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 4.4e-37 159.1 238 44.5
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 2.2e-36 156.8 193 53.4
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 3.7e-36 156.0 218 49.1
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 4.9e-36 155.6 213 46.0
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.0e-34 150.2 243 40.7
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 4.6e-34 149.1 222 45.0
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 1.0e-33 147.9 239 43.1
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 1.3e-33 147.5 281 42.0
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 3.9e-33 146.0 256 41.4
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 1.1e-32 144.4 233 42.5
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.2e-31 141.0 182 47.8
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 6.2e-31 138.7 279 38.0
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 4.0e-30 136.0 220 40.9
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 2.0e-29 133.7 214 40.7
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.1e-27 127.9 184 45.7
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 5.6e-24 115.5 218 39.4
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.2e-23 114.4 239 40.2
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 2.4e-19 100.1 150 45.3
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 9.2e-19 98.2 229 39.3
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 3.4e-13 79.7 92 54.3
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 5.1e-09 65.9 160 36.9
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.3e-07 61.2 112 41.1
Pp3c15_7400 Physcomitrium patens HOM05D000098 ORTHO05D000523 1.8e-06 57.4 92 34.8
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 6.9e-06 55.5 102 33.3


User provided reference genes

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