Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p18850 Brassica napus HOM05D000416 ORTHO05D027099 1.0e-63 246.5 122 100.0
BcaC05g25933 Brassica carinata HOM05D000416 ORTHO05D000322 4.9e-61 237.7 121 95.9
BcaC01g02569 Brassica carinata HOM05D000416 ORTHO05D027099 4.5e-59 231.1 118 97.5
C03p63370 Brassica napus HOM05D000416 ORTHO05D027099 4.5e-59 231.1 118 97.5
BolC3t18590H Brassica oleracea HOM05D000416 ORTHO05D027099 4.5e-59 231.1 118 97.5
BcaB07g32476 Brassica carinata HOM05D000416 ORTHO05D000322 6.8e-47 190.7 130 77.7
BcaB06g27399 Brassica carinata HOM05D000416 ORTHO05D000322 2.6e-46 188.7 130 76.2
Sp6g25270 Schrenkiella parvula HOM05D000416 ORTHO05D000322 3.1e-39 165.2 130 70.0
BraA02t05480Z Brassica rapa HOM05D000416 ORTHO05D000322 1.9e-36 156.0 125 68.8
BcaB05g23364 Brassica carinata HOM05D000416 ORTHO05D000322 7.1e-36 154.1 125 68.0
BcaC05g26905 Brassica carinata HOM05D000416 ORTHO05D000322 9.2e-36 153.7 131 66.4
C05p27610 Brassica napus HOM05D000416 ORTHO05D000322 9.2e-36 153.7 131 66.4
BolC5t31482H Brassica oleracea HOM05D000416 ORTHO05D000322 9.2e-36 153.7 131 66.4
A02p05210 Brassica napus HOM05D000416 ORTHO05D000322 2.1e-35 152.5 125 67.2
CARHR193880 Cardamine hirsuta HOM05D000416 ORTHO05D000322 2.7e-27 125.6 132 59.1
Thhalv10013672m.g Eutrema salsugineum HOM05D000416 ORTHO05D000322 1.5e-25 119.8 137 54.0
AL6G30520 Arabidopsis lyrata HOM05D000416 ORTHO05D000322 8.4e-21 104.0 115 52.2
BolC3t15591H Brassica oleracea HOM05D000416 ORTHO05D000322 2.4e-20 102.4 120 51.7
BraA03t11921Z Brassica rapa HOM05D000416 ORTHO05D000322 4.2e-20 101.7 120 50.8
BcaC01g04900 Brassica carinata HOM05D000416 ORTHO05D000322 5.4e-20 101.3 120 51.7
C03p32520 Brassica napus HOM05D000416 ORTHO05D000322 5.4e-20 101.3 120 51.7
Aa31LG11G10540 Aethionema arabicum HOM05D000416 ORTHO05D000322 7.1e-20 100.9 135 46.7
BcaB01g02943 Brassica carinata HOM05D000416 ORTHO05D000322 9.3e-20 100.5 120 50.8
A03p27080 Brassica napus HOM05D000416 ORTHO05D000322 2.1e-19 99.4 120 50.0
Carub.0006s1743 Capsella rubella HOM05D000416 ORTHO05D000322 1.0e-18 97.1 109 53.2
AT5G19100 Arabidopsis thaliana HOM05D000416 ORTHO05D000322 1.9e-17 92.8 109 51.4
BcaB05g23365 Brassica carinata HOM05D000416 ORTHO05D000322 9.6e-17 90.5 115 48.7
Aa31LG11G10580 Aethionema arabicum HOM05D000416 ORTHO05D000322 1.3e-16 90.1 131 44.3
Aa31LG11G10600 Aethionema arabicum HOM05D000416 ORTHO05D000322 2.4e-15 85.9 128 45.3
CARHR193870 Cardamine hirsuta HOM05D000416 ORTHO05D000322 6.9e-15 84.3 141 44.0
CARHR193850 Cardamine hirsuta HOM05D000416 ORTHO05D000322 4.6e-11 71.6 102 45.1
Sp6g25260 Schrenkiella parvula HOM05D000416 ORTHO05D000322 1.1e-09 67.0 121 40.5
BcaC03g13640 Brassica carinata HOM05D000416 ORTHO05D000322 2.5e-09 65.9 121 40.5
C02p10300 Brassica napus HOM05D000416 ORTHO05D000322 2.5e-09 65.9 121 40.5
BcaC01g04901 Brassica carinata HOM05D000416 ORTHO05D008509 3.3e-09 65.5 80 51.2
Thhalv10015503m.g Eutrema salsugineum HOM05D000416 ORTHO05D000322 5.6e-09 64.7 121 38.8
A02p05220 Brassica napus HOM05D000416 ORTHO05D000322 7.4e-09 64.3 110 42.7
BcaB05g23367 Brassica carinata HOM05D000305 ORTHO05D000065 1.1e-07 60.5 121 38.0


User provided reference genes

Program Settings